Gene annotation
Transcriptome id Sobic.009G161000.2,Sobic.009G161000.1
Synonym Sb09g022360
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
oxidoreductase, aldo/keto reductase family protein, putative, expressed
UniProt A0A1Z5R2X1 , C5YZ77
Pfam PF00248
Panther DB PTHR11732 PTHR11732:SF276
NCBI CDD KOG1577; Aldo/keto reductase family proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37790 : NAD(P)-linked oxidoreductase superfamily protein
RAP-DB (Rice) LOC_Os01g62870.1 : oxidoreductase, aldo/keto reductase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a043890 , Zm00025a037180
Brachypodium KQK10565
Barley HORVU1Hr1G072680.2 , HORVU1Hr1G072680.3 , HORVU1Hr1G072690.3 , HORVU1Hr1G072690.2 , HORVU1Hr1G072690.4
Wheat TraesCS1A02G282400 , TraesCS1B02G291400 , TraesCS1D02G281600 , TraesCS1D02G281500 , TraesCS1B02G028300 , TraesCS1D02G281700 , TraesCS1D02G281700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G178100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@F-box/Kelch-repeat protein, putative, expressed -
2 Sobic.004G101900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@citrate synthase, putative, expressed K01647: CS, citrate synthase
3 Sobic.001G325200 Expressed in drought and oxidative stress(PubMedID : 29862293)@aldehyde oxidase, putative, expressed K00106: xanthine dehydrogenase/oxidase
4 Sobic.006G100332 - -
5 Sobic.003G105800 No apical meristem protein, putative, expressed -
6 Sobic.004G260000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
7 Sobic.009G226300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
8 Sobic.001G305800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@U-box domain containing protein, expressed -
9 Sobic.004G124200 3-hydroxyacyl-CoA dehydrogenase, putative, expressed K10527: enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
10 Sobic.001G015500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
11 Sobic.008G153400 peptidase, putative, expressed K18151: ureidoglycolate amidohydrolase
12 Sobic.006G199000 pathogenesis-related Bet v I family protein, putative, expressed -
13 Sobic.001G150600 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K13606: NOL, chlorophyll(ide) b reductase
14 Sobic.003G087200 nuclease PA3, putative, expressed -
15 Sobic.003G184900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@esterase, putative, expressed -
16 Sobic.008G062200 dehydrogenase E1 component domain containing protein, expressed K00166: BCKDHA, 2-oxoisovalerate dehydrogenase E1 component alpha subunit
17 Sobic.009G054500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@lipase, putative, expressed -
18 Sobic.002G304000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nitrilase, putative, expressed K01431: UPB1, beta-ureidopropionase
19 Sobic.001G249300 Cf2/Cf5 disease resistance protein, putative, expressed -
20 Sobic.006G091700 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase


Gene co-expression network
sample Sobic009G161000 Sobic009G161000 Sobic005G178100 Sobic005G178100 Sobic009G161000--Sobic005G178100 Sobic004G101900 Sobic004G101900 Sobic009G161000--Sobic004G101900 Sobic001G325200 Sobic001G325200 Sobic009G161000--Sobic001G325200 Sobic006G100332 Sobic006G100332 Sobic009G161000--Sobic006G100332 Sobic003G105800 Sobic003G105800 Sobic009G161000--Sobic003G105800 Sobic004G260000 Sobic004G260000 Sobic009G161000--Sobic004G260000 Sobic009G226300 Sobic009G226300 Sobic009G161000--Sobic009G226300 Sobic001G305800 Sobic001G305800 Sobic009G161000--Sobic001G305800 Sobic004G124200 Sobic004G124200 Sobic009G161000--Sobic004G124200 Sobic005G178100--Sobic009G161000 Sobic005G178100--Sobic001G305800 Sobic003G087200 Sobic003G087200 Sobic005G178100--Sobic003G087200 Sobic002G420700 Sobic002G420700 Sobic005G178100--Sobic002G420700 Sobic001G015500 Sobic001G015500 Sobic005G178100--Sobic001G015500 Sobic005G178100--Sobic003G105800 Sobic009G034700 Sobic009G034700 Sobic005G178100--Sobic009G034700 Sobic003G184900 Sobic003G184900 Sobic005G178100--Sobic003G184900 Sobic001G150600 Sobic001G150600 Sobic005G178100--Sobic001G150600 Sobic002G304000 Sobic002G304000 Sobic004G101900--Sobic002G304000 Sobic002G215700 Sobic002G215700 Sobic004G101900--Sobic002G215700 Sobic004G101900--Sobic001G325200 Sobic004G101900--Sobic009G226300 Sobic009G054500 Sobic009G054500 Sobic004G101900--Sobic009G054500 Sobic008G062200 Sobic008G062200 Sobic004G101900--Sobic008G062200 Sobic003G148800 Sobic003G148800 Sobic004G101900--Sobic003G148800 Sobic004G101900--Sobic004G124200 Sobic004G101900--Sobic001G015500 Sobic007G068100 Sobic007G068100 Sobic001G325200--Sobic007G068100 Sobic001G325200--Sobic009G226300 Sobic001G325200--Sobic003G148800 Sobic004G321800 Sobic004G321800 Sobic001G325200--Sobic004G321800 Sobic001G325200--Sobic004G101900 Sobic001G325200--Sobic002G304000 Sobic001G325200--Sobic009G054500 Sobic001G325200--Sobic001G015500 Sobic003G355600 Sobic003G355600 Sobic001G325200--Sobic003G355600 Sobic006G100332--Sobic001G150600 Sobic006G100332--Sobic003G087200 Sobic006G100332--Sobic009G226300 Sobic006G100332--Sobic009G054500 Sobic006G100332--Sobic004G321800 Sobic007G187300 Sobic007G187300 Sobic006G100332--Sobic007G187300 Sobic006G030700 Sobic006G030700 Sobic006G100332--Sobic006G030700 Sobic001G249300 Sobic001G249300 Sobic006G100332--Sobic001G249300 Sobic006G100332--Sobic003G148800 Sobic003G105800--Sobic003G184900 Sobic008G079300 Sobic008G079300 Sobic003G105800--Sobic008G079300 Sobic003G105800--Sobic004G321800 Sobic003G105800--Sobic001G325200 Sobic003G105800--Sobic002G304000 Sobic007G225900 Sobic007G225900 Sobic003G105800--Sobic007G225900 Sobic003G105800--Sobic006G100332 Sobic003G105800--Sobic003G087200 Sobic003G105800--Sobic009G226300 Sobic005G018500 Sobic005G018500 Sobic004G260000--Sobic005G018500 Sobic004G260000--Sobic009G054500 Sobic004G260000--Sobic009G226300 Sobic004G255000 Sobic004G255000 Sobic004G260000--Sobic004G255000 Sobic004G260000--Sobic001G249300 Sobic004G260000--Sobic008G062200 Sobic004G260000--Sobic007G187300 Sobic003G219600 Sobic003G219600 Sobic004G260000--Sobic003G219600 Sobic009G211400 Sobic009G211400 Sobic004G260000--Sobic009G211400 Sobic009G226300--Sobic009G054500 Sobic009G226300--Sobic001G249300 Sobic009G226300--Sobic007G187300 Sobic009G226300--Sobic006G030700 Sobic009G226300--Sobic003G148800 Sobic009G226300--Sobic006G100332 Sobic009G226300--Sobic001G325200 Sobic009G226300--Sobic002G304000 Sobic009G226300--Sobic004G260000 Sobic001G305800--Sobic005G178100 Sobic001G305800--Sobic006G030700 Sobic001G305800--Sobic001G150600 Sobic001G305800--Sobic009G161000 Sobic001G305800--Sobic006G100332 Sobic001G305800--Sobic003G087200 Sobic001G305800--Sobic009G226300 Sobic001G305800--Sobic009G054500 Sobic007G092900 Sobic007G092900 Sobic001G305800--Sobic007G092900 Sobic003G388251 Sobic003G388251 Sobic004G124200--Sobic003G388251 Sobic004G124200--Sobic004G101900 Sobic004G124200--Sobic001G325200 Sobic004G124200--Sobic001G015500 Sobic004G124200--Sobic009G161000 Sobic010G043400 Sobic010G043400 Sobic004G124200--Sobic010G043400 Sobic006G199000 Sobic006G199000 Sobic004G124200--Sobic006G199000 Sobic004G124200--Sobic007G068100 Sobic004G124200--Sobic005G178100
Octagon: transcription factors


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