Gene annotation
Transcriptome id Sobic.002G266000.1
Synonym Sb02g030070
Functional annotation ankyrin repeat-containing protein, putative, expressed
UniProt C5X5G9
Pfam PF13962 PF12796
Panther DB PTHR24186 PTHR24186:SF5
NCBI CDD KOG4412; 26S proteasome regulatory complex, subunit PSMD10
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G31820 : Ankyrin repeat family protein
RAP-DB (Rice) LOC_Os09g34280.4 : ankyrin repeat-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a014366 , Zm00025a047666
Brachypodium KQJ99228 , KQJ99229 , KQJ99232 , KQJ99231 , KQJ99230 , KQJ91090
Barley HORVU5Hr1G079730.3 , HORVU5Hr1G079730.2 , HORVU5Hr1G079730.5 , HORVU5Hr1G079730.4 , HORVU7Hr1G056430.2 , HORVU7Hr1G056430.1
Wheat TraesCS5B02G305700 , TraesCS7D02G268900 , TraesCS7A02G265800 , TraesCS5A02G305200 , TraesCS5D02G312200 , TraesCS7D02G268900 , TraesCS7B02G166600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G322700 expressed protein -
2 Sobic.001G282600 transporter family protein, putative, expressed -
3 Sobic.006G104600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.002G249200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin efflux carrier component, putative, expressed -
5 Sobic.004G261900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@diacylglycerol O-acyltransferase, putative, expressed K14457: MOGAT2, 2-acylglycerol O-acyltransferase 2
6 Sobic.007G004500 phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
7 Sobic.004G034600 hydrolase, alpha/beta fold family domain containing protein, expressed -
8 Sobic.005G149700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
9 Sobic.004G225200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein nitrilase 4 NIT4 (Os)(PubMedID : 27208977)@nitrilase, putative, expressed K13035: beta-cyano-L-alanine hydratase/nitrilase
10 Sobic.006G199000 pathogenesis-related Bet v I family protein, putative, expressed -
11 Sobic.001G504900 pheophorbide a oxygenase, chloroplast precursor, putative, expressed K13071: PAO, pheophorbide a oxygenase
12 Sobic.003G398100 antigen peptide transporter-like 1, chloroplast precursor, putative, expressed -
13 Sobic.004G124200 3-hydroxyacyl-CoA dehydrogenase, putative, expressed K10527: enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
14 Sobic.001G462500 natural resistance-associated macrophage protein, putative, expressed K12347: SLC11A1, natural resistance-associated macrophage protein 1
15 Sobic.001G207400 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
16 Sobic.001G301700 MYB family transcription factor, putative, expressed K09522: DnaJ homolog subfamily C member 2
17 Sobic.001G016700 ion channel DMI1-like, chloroplast precursor, putative, expressed -
18 Sobic.003G355600 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
19 Sobic.009G207600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dnaJ domain containing protein, expressed -
20 Sobic.006G028900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -


Gene co-expression network
sample Sobic002G266000 Sobic002G266000 Sobic003G322700 Sobic003G322700 Sobic002G266000--Sobic003G322700 Sobic001G282600 Sobic001G282600 Sobic002G266000--Sobic001G282600 Sobic006G104600 Sobic006G104600 Sobic002G266000--Sobic006G104600 Sobic002G249200 Sobic002G249200 Sobic002G266000--Sobic002G249200 Sobic004G261900 Sobic004G261900 Sobic002G266000--Sobic004G261900 Sobic007G004500 Sobic007G004500 Sobic002G266000--Sobic007G004500 Sobic004G034600 Sobic004G034600 Sobic002G266000--Sobic004G034600 Sobic005G149700 Sobic005G149700 Sobic002G266000--Sobic005G149700 Sobic004G225200 Sobic004G225200 Sobic002G266000--Sobic004G225200 Sobic003G322700--Sobic002G266000 Sobic006G204900 Sobic006G204900 Sobic003G322700--Sobic006G204900 Sobic010G001500 Sobic010G001500 Sobic003G322700--Sobic010G001500 Sobic004G355000 Sobic004G355000 Sobic003G322700--Sobic004G355000 Sobic001G207400 Sobic001G207400 Sobic003G322700--Sobic001G207400 Sobic003G355600 Sobic003G355600 Sobic003G322700--Sobic003G355600 Sobic006G087700 Sobic006G087700 Sobic003G322700--Sobic006G087700 Sobic006G199000 Sobic006G199000 Sobic003G322700--Sobic006G199000 Sobic003G322700--Sobic004G034600 Sobic001G282600--Sobic002G266000 Sobic001G282600--Sobic006G104600 Sobic001G282600--Sobic006G199000 Sobic001G282600--Sobic004G225200 Sobic007G210500 Sobic007G210500 Sobic001G282600--Sobic007G210500 Sobic004G329300 Sobic004G329300 Sobic001G282600--Sobic004G329300 Sobic008G153400 Sobic008G153400 Sobic001G282600--Sobic008G153400 Sobic001G282600--Sobic003G355600 Sobic001G282600--Sobic003G322700 Sobic006G104600--Sobic001G282600 Sobic006G104600--Sobic002G266000 Sobic003G320700 Sobic003G320700 Sobic006G104600--Sobic003G320700 Sobic001G305500 Sobic001G305500 Sobic006G104600--Sobic001G305500 Sobic002G128200 Sobic002G128200 Sobic006G104600--Sobic002G128200 Sobic006G104600--Sobic003G322700 Sobic006G104600--Sobic006G199000 Sobic006G104600--Sobic005G149700 Sobic006G104600--Sobic004G225200 Sobic002G249200--Sobic002G266000 Sobic002G249200--Sobic001G282600 Sobic009G161000 Sobic009G161000 Sobic002G249200--Sobic009G161000 Sobic002G274800 Sobic002G274800 Sobic002G249200--Sobic002G274800 Sobic001G504900 Sobic001G504900 Sobic002G249200--Sobic001G504900 Sobic005G178100 Sobic005G178100 Sobic002G249200--Sobic005G178100 Sobic010G203200 Sobic010G203200 Sobic002G249200--Sobic010G203200 Sobic007G225900 Sobic007G225900 Sobic002G249200--Sobic007G225900 Sobic004G124200 Sobic004G124200 Sobic002G249200--Sobic004G124200 Sobic004G261900--Sobic001G504900 Sobic004G261900--Sobic002G266000 Sobic004G261900--Sobic004G034600 Sobic004G261900--Sobic003G322700 Sobic003G398100 Sobic003G398100 Sobic004G261900--Sobic003G398100 Sobic004G261900--Sobic004G225200 Sobic004G261900--Sobic005G149700 Sobic009G207600 Sobic009G207600 Sobic004G261900--Sobic009G207600 Sobic001G517800 Sobic001G517800 Sobic004G261900--Sobic001G517800 Sobic007G004500--Sobic002G266000 Sobic002G430000 Sobic002G430000 Sobic007G004500--Sobic002G430000 Sobic001G085300 Sobic001G085300 Sobic007G004500--Sobic001G085300 Sobic001G390800 Sobic001G390800 Sobic007G004500--Sobic001G390800 Sobic001G016700 Sobic001G016700 Sobic007G004500--Sobic001G016700 Sobic007G004500--Sobic003G322700 Sobic010G139600 Sobic010G139600 Sobic007G004500--Sobic010G139600 Sobic004G065000 Sobic004G065000 Sobic007G004500--Sobic004G065000 Sobic009G133500 Sobic009G133500 Sobic007G004500--Sobic009G133500 Sobic004G034600--Sobic005G149700 Sobic002G249300 Sobic002G249300 Sobic004G034600--Sobic002G249300 Sobic004G034600--Sobic001G517800 Sobic009G011600 Sobic009G011600 Sobic004G034600--Sobic009G011600 Sobic004G034600--Sobic002G266000 Sobic001G459600 Sobic001G459600 Sobic004G034600--Sobic001G459600 Sobic004G034600--Sobic003G322700 Sobic001G223550 Sobic001G223550 Sobic004G034600--Sobic001G223550 Sobic004G034600--Sobic004G261900 Sobic005G149700--Sobic004G034600 Sobic005G149700--Sobic001G504900 Sobic005G149700--Sobic002G266000 Sobic005G149700--Sobic002G128200 Sobic005G149700--Sobic006G104600 Sobic005G149700--Sobic009G011600 Sobic005G149700--Sobic009G207600 Sobic003G174301 Sobic003G174301 Sobic005G149700--Sobic003G174301 Sobic005G149700--Sobic003G398100 Sobic004G225100 Sobic004G225100 Sobic004G225200--Sobic004G225100 Sobic004G225200--Sobic001G282600 Sobic004G225200--Sobic002G266000 Sobic004G225200--Sobic006G199000 Sobic004G225200--Sobic003G398100 Sobic004G225200--Sobic006G104600 Sobic004G071200 Sobic004G071200 Sobic004G225200--Sobic004G071200 Sobic004G225200--Sobic003G322700 Sobic004G225200--Sobic005G178100
Octagon: transcription factors


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