Gene annotation
Transcriptome id Sobic.006G104600.1
Synonym Sb06g018770
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5Y9S7
Pfam -
Panther DB PTHR31827 PTHR31827:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G64550 : loricrin-related
RAP-DB (Rice) LOC_Os04g38525.1 : expressed protein
MaizeGDB (Corn) Zm00025a011136 , Zm00025a056192
Brachypodium -
Barley HORVU2Hr1G080050.9 , HORVU2Hr1G080050.7 , HORVU2Hr1G080050.13 , HORVU2Hr1G080050.12 , HORVU2Hr1G080050.11 , HORVU2Hr1G080050.10 , HORVU2Hr1G080050.16 , HORVU2Hr1G080050.15 , HORVU2Hr1G080050.14
Wheat TraesCS2A02G343200 , TraesCS2B02G340800
Populus -


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cDNA sequences
Sobic.006G104600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G282600 transporter family protein, putative, expressed -
2 Sobic.002G266000 ankyrin repeat-containing protein, putative, expressed -
3 Sobic.003G320700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.001G305500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.002G128200 Regulator of chromosome condensation (RCC1) family protein(PubMedID : 26465154)@Regulator of chromosome condensation domain containing protein, expressed -
6 Sobic.003G322700 expressed protein -
7 Sobic.006G199000 pathogenesis-related Bet v I family protein, putative, expressed -
8 Sobic.005G149700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
9 Sobic.004G225200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein nitrilase 4 NIT4 (Os)(PubMedID : 27208977)@nitrilase, putative, expressed K13035: beta-cyano-L-alanine hydratase/nitrilase
10 Sobic.002G262300 lecithine cholesterol acyltransferase, putative, expressed -
11 Sobic.003G398100 antigen peptide transporter-like 1, chloroplast precursor, putative, expressed -
12 Sobic.007G210500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed -
13 Sobic.004G329300 leucine aminopeptidase, chloroplast precursor, putative, expressed K01255: CARP, leucyl aminopeptidase
14 Sobic.009G193700 transmembrane protein 56, putative, expressed -
15 Sobic.004G261900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@diacylglycerol O-acyltransferase, putative, expressed K14457: MOGAT2, 2-acylglycerol O-acyltransferase 2
16 Sobic.003G355600 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
17 Sobic.006G204900 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
18 Sobic.001G107600 - K18328: lariat debranching enzyme
19 Sobic.001G517800 NIN, putative, expressed -
20 Sobic.001G496100 - -


Gene co-expression network
sample Sobic006G104600 Sobic006G104600 Sobic001G282600 Sobic001G282600 Sobic006G104600--Sobic001G282600 Sobic002G266000 Sobic002G266000 Sobic006G104600--Sobic002G266000 Sobic003G320700 Sobic003G320700 Sobic006G104600--Sobic003G320700 Sobic001G305500 Sobic001G305500 Sobic006G104600--Sobic001G305500 Sobic002G128200 Sobic002G128200 Sobic006G104600--Sobic002G128200 Sobic003G322700 Sobic003G322700 Sobic006G104600--Sobic003G322700 Sobic006G199000 Sobic006G199000 Sobic006G104600--Sobic006G199000 Sobic005G149700 Sobic005G149700 Sobic006G104600--Sobic005G149700 Sobic004G225200 Sobic004G225200 Sobic006G104600--Sobic004G225200 Sobic001G282600--Sobic002G266000 Sobic001G282600--Sobic006G104600 Sobic001G282600--Sobic006G199000 Sobic001G282600--Sobic004G225200 Sobic007G210500 Sobic007G210500 Sobic001G282600--Sobic007G210500 Sobic004G329300 Sobic004G329300 Sobic001G282600--Sobic004G329300 Sobic008G153400 Sobic008G153400 Sobic001G282600--Sobic008G153400 Sobic003G355600 Sobic003G355600 Sobic001G282600--Sobic003G355600 Sobic001G282600--Sobic003G322700 Sobic002G266000--Sobic003G322700 Sobic002G266000--Sobic001G282600 Sobic002G266000--Sobic006G104600 Sobic002G249200 Sobic002G249200 Sobic002G266000--Sobic002G249200 Sobic004G261900 Sobic004G261900 Sobic002G266000--Sobic004G261900 Sobic007G004500 Sobic007G004500 Sobic002G266000--Sobic007G004500 Sobic004G034600 Sobic004G034600 Sobic002G266000--Sobic004G034600 Sobic002G266000--Sobic005G149700 Sobic002G266000--Sobic004G225200 Sobic003G301900 Sobic003G301900 Sobic003G320700--Sobic003G301900 Sobic003G320700--Sobic006G104600 Sobic001G517800 Sobic001G517800 Sobic003G320700--Sobic001G517800 Sobic001G436900 Sobic001G436900 Sobic003G320700--Sobic001G436900 Sobic007G075400 Sobic007G075400 Sobic003G320700--Sobic007G075400 Sobic006G204900 Sobic006G204900 Sobic003G320700--Sobic006G204900 Sobic006G087700 Sobic006G087700 Sobic003G320700--Sobic006G087700 Sobic003G320700--Sobic003G322700 Sobic009G193700 Sobic009G193700 Sobic003G320700--Sobic009G193700 Sobic001G305500--Sobic006G104600 Sobic002G262300 Sobic002G262300 Sobic001G305500--Sobic002G262300 Sobic001G207400 Sobic001G207400 Sobic001G305500--Sobic001G207400 Sobic003G398100 Sobic003G398100 Sobic001G305500--Sobic003G398100 Sobic001G305500--Sobic002G266000 Sobic001G305500--Sobic006G087700 Sobic004G314700 Sobic004G314700 Sobic001G305500--Sobic004G314700 Sobic001G305500--Sobic007G210500 Sobic001G305500--Sobic006G199000 Sobic002G128200--Sobic005G149700 Sobic002G128200--Sobic006G104600 Sobic006G002300 Sobic006G002300 Sobic002G128200--Sobic006G002300 Sobic002G128200--Sobic006G087700 Sobic004G179300 Sobic004G179300 Sobic002G128200--Sobic004G179300 Sobic002G128200--Sobic003G301900 Sobic009G011600 Sobic009G011600 Sobic002G128200--Sobic009G011600 Sobic002G128200--Sobic001G517800 Sobic001G375100 Sobic001G375100 Sobic002G128200--Sobic001G375100 Sobic003G322700--Sobic002G266000 Sobic003G322700--Sobic006G204900 Sobic010G001500 Sobic010G001500 Sobic003G322700--Sobic010G001500 Sobic004G355000 Sobic004G355000 Sobic003G322700--Sobic004G355000 Sobic003G322700--Sobic001G207400 Sobic003G322700--Sobic003G355600 Sobic003G322700--Sobic006G087700 Sobic003G322700--Sobic006G199000 Sobic003G322700--Sobic004G034600 Sobic006G199000--Sobic008G153400 Sobic006G199000--Sobic003G398100 Sobic003G257100 Sobic003G257100 Sobic006G199000--Sobic003G257100 Sobic006G199000--Sobic003G355600 Sobic001G325200 Sobic001G325200 Sobic006G199000--Sobic001G325200 Sobic001G150600 Sobic001G150600 Sobic006G199000--Sobic001G150600 Sobic001G015500 Sobic001G015500 Sobic006G199000--Sobic001G015500 Sobic006G199000--Sobic001G282600 Sobic006G091700 Sobic006G091700 Sobic006G199000--Sobic006G091700 Sobic005G149700--Sobic004G034600 Sobic001G504900 Sobic001G504900 Sobic005G149700--Sobic001G504900 Sobic005G149700--Sobic002G266000 Sobic005G149700--Sobic002G128200 Sobic005G149700--Sobic006G104600 Sobic005G149700--Sobic009G011600 Sobic009G207600 Sobic009G207600 Sobic005G149700--Sobic009G207600 Sobic003G174301 Sobic003G174301 Sobic005G149700--Sobic003G174301 Sobic005G149700--Sobic003G398100 Sobic004G225100 Sobic004G225100 Sobic004G225200--Sobic004G225100 Sobic004G225200--Sobic001G282600 Sobic004G225200--Sobic002G266000 Sobic004G225200--Sobic006G199000 Sobic004G225200--Sobic003G398100 Sobic004G225200--Sobic006G104600 Sobic004G071200 Sobic004G071200 Sobic004G225200--Sobic004G071200 Sobic004G225200--Sobic003G322700 Sobic005G178100 Sobic005G178100 Sobic004G225200--Sobic005G178100
Octagon: transcription factors


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