Gene annotation
Transcriptome id Sobic.002G262300.2
Synonym Sb02g029710, ATLCAT3, LCAT3
Functional annotation lecithine cholesterol acyltransferase, putative, expressed
UniProt A0A1W0W619
Pfam PF02450
Panther DB PTHR11440 PTHR11440:SF53
NCBI CDD KOG2369; Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase
KEGG Orthology -
Gene Ontology GO:0008374; O-acyltransferase activity GO:0006629lipid metabolic process


Orthologs (automatic annotation)
TAIR AT3G03310 : lecithin:cholesterol acyltransferase 3
RAP-DB (Rice) LOC_Os09g33820.2 : lecithine cholesterol acyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a047629
Brachypodium KQJ90986 , KQJ90987 , KQJ90984 , KQJ90985 , KQJ90983 , PNT64921
Barley HORVU5Hr1G078130.18 , HORVU5Hr1G078130.12 , HORVU5Hr1G078130.13 , HORVU5Hr1G078130.10 , HORVU5Hr1G078130.11 , HORVU5Hr1G078130.16 , HORVU5Hr1G078130.17 , HORVU5Hr1G078130.1 , HORVU5Hr1G078130.2 , HORVU5Hr1G078130.3 , HORVU5Hr1G078130.4 , HORVU5Hr1G078130.5 , HORVU5Hr1G078130.6 , HORVU5Hr1G078130.7 , HORVU5Hr1G078130.9
Wheat TraesCS5D02G304100 , TraesCS5B02G296300 , TraesCS5A02G297000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G210500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed -
2 Sobic.009G080400 hydroquinone glucosyltransferase, putative, expressed K08237: hydroquinone glucosyltransferase
3 Sobic.001G305500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.006G104600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.002G128200 Regulator of chromosome condensation (RCC1) family protein(PubMedID : 26465154)@Regulator of chromosome condensation domain containing protein, expressed -
6 Sobic.003G320700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.001G517800 NIN, putative, expressed -
8 Sobic.003G242000 AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
9 Sobic.001G062300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aldehyde oxidase, putative, expressed K11817: indole-3-acetaldehyde oxidase
10 Sobic.001G282600 transporter family protein, putative, expressed -
11 Sobic.006G002300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.003G301900 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase
13 Sobic.003G398100 antigen peptide transporter-like 1, chloroplast precursor, putative, expressed -
14 Sobic.006G087700 T-complex protein 11, putative, expressed -
15 Sobic.010G169000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Multi-drugresistance-associated protein 6(PubMedID : 26320239)@ABC transporter, ATP-binding protein, putative, expressed -
16 Sobic.010G020800 aminotransferase, classes I and II, domain containing protein, expressed K14270: aminotransferase
17 Sobic.004G211866 - -
18 Sobic.006G064600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AMP-binding enzyme, putative, expressed K01895: ACSS1_2, acetyl-CoA synthetase
19 Sobic.004G225200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein nitrilase 4 NIT4 (Os)(PubMedID : 27208977)@nitrilase, putative, expressed K13035: beta-cyano-L-alanine hydratase/nitrilase
20 Sobic.004G179300 chloride channel protein, putative, expressed K05016: chloride channel 7


Gene co-expression network
sample Sobic002G262300 Sobic002G262300 Sobic007G210500 Sobic007G210500 Sobic002G262300--Sobic007G210500 Sobic009G080400 Sobic009G080400 Sobic002G262300--Sobic009G080400 Sobic001G305500 Sobic001G305500 Sobic002G262300--Sobic001G305500 Sobic006G104600 Sobic006G104600 Sobic002G262300--Sobic006G104600 Sobic002G128200 Sobic002G128200 Sobic002G262300--Sobic002G128200 Sobic003G320700 Sobic003G320700 Sobic002G262300--Sobic003G320700 Sobic001G517800 Sobic001G517800 Sobic002G262300--Sobic001G517800 Sobic003G242000 Sobic003G242000 Sobic002G262300--Sobic003G242000 Sobic001G062300 Sobic001G062300 Sobic002G262300--Sobic001G062300 Sobic001G282600 Sobic001G282600 Sobic007G210500--Sobic001G282600 Sobic007G210500--Sobic002G262300 Sobic007G210500--Sobic009G080400 Sobic010G169000 Sobic010G169000 Sobic007G210500--Sobic010G169000 Sobic007G210500--Sobic001G305500 Sobic003G051600 Sobic003G051600 Sobic007G210500--Sobic003G051600 Sobic007G210500--Sobic006G104600 Sobic001G217400 Sobic001G217400 Sobic007G210500--Sobic001G217400 Sobic004G225200 Sobic004G225200 Sobic007G210500--Sobic004G225200 Sobic009G080400--Sobic002G262300 Sobic009G080400--Sobic007G210500 Sobic009G080400--Sobic001G062300 Sobic010G272800 Sobic010G272800 Sobic009G080400--Sobic010G272800 Sobic004G329300 Sobic004G329300 Sobic009G080400--Sobic004G329300 Sobic009G080400--Sobic001G282600 Sobic009G080400--Sobic006G104600 Sobic004G211866 Sobic004G211866 Sobic009G080400--Sobic004G211866 Sobic003G442601 Sobic003G442601 Sobic009G080400--Sobic003G442601 Sobic001G305500--Sobic006G104600 Sobic001G305500--Sobic002G262300 Sobic001G207400 Sobic001G207400 Sobic001G305500--Sobic001G207400 Sobic003G398100 Sobic003G398100 Sobic001G305500--Sobic003G398100 Sobic002G266000 Sobic002G266000 Sobic001G305500--Sobic002G266000 Sobic006G087700 Sobic006G087700 Sobic001G305500--Sobic006G087700 Sobic004G314700 Sobic004G314700 Sobic001G305500--Sobic004G314700 Sobic001G305500--Sobic007G210500 Sobic006G199000 Sobic006G199000 Sobic001G305500--Sobic006G199000 Sobic006G104600--Sobic001G282600 Sobic006G104600--Sobic002G266000 Sobic006G104600--Sobic003G320700 Sobic006G104600--Sobic001G305500 Sobic006G104600--Sobic002G128200 Sobic003G322700 Sobic003G322700 Sobic006G104600--Sobic003G322700 Sobic006G104600--Sobic006G199000 Sobic005G149700 Sobic005G149700 Sobic006G104600--Sobic005G149700 Sobic006G104600--Sobic004G225200 Sobic002G128200--Sobic005G149700 Sobic002G128200--Sobic006G104600 Sobic006G002300 Sobic006G002300 Sobic002G128200--Sobic006G002300 Sobic002G128200--Sobic006G087700 Sobic004G179300 Sobic004G179300 Sobic002G128200--Sobic004G179300 Sobic003G301900 Sobic003G301900 Sobic002G128200--Sobic003G301900 Sobic009G011600 Sobic009G011600 Sobic002G128200--Sobic009G011600 Sobic002G128200--Sobic001G517800 Sobic001G375100 Sobic001G375100 Sobic002G128200--Sobic001G375100 Sobic003G320700--Sobic003G301900 Sobic003G320700--Sobic006G104600 Sobic003G320700--Sobic001G517800 Sobic001G436900 Sobic001G436900 Sobic003G320700--Sobic001G436900 Sobic007G075400 Sobic007G075400 Sobic003G320700--Sobic007G075400 Sobic006G204900 Sobic006G204900 Sobic003G320700--Sobic006G204900 Sobic003G320700--Sobic006G087700 Sobic003G320700--Sobic003G322700 Sobic009G193700 Sobic009G193700 Sobic003G320700--Sobic009G193700 Sobic001G459600 Sobic001G459600 Sobic001G517800--Sobic001G459600 Sobic001G517800--Sobic003G301900 Sobic004G034600 Sobic004G034600 Sobic001G517800--Sobic004G034600 Sobic010G020800 Sobic010G020800 Sobic001G517800--Sobic010G020800 Sobic001G517800--Sobic009G011600 Sobic005G149200 Sobic005G149200 Sobic001G517800--Sobic005G149200 Sobic001G517800--Sobic003G320700 Sobic001G517800--Sobic003G322700 Sobic002G146300 Sobic002G146300 Sobic001G517800--Sobic002G146300 Sobic003G198800 Sobic003G198800 Sobic003G242000--Sobic003G198800 Sobic003G242000--Sobic002G262300 Sobic003G115900 Sobic003G115900 Sobic003G242000--Sobic003G115900 Sobic002G383600 Sobic002G383600 Sobic003G242000--Sobic002G383600 Sobic001G064200 Sobic001G064200 Sobic003G242000--Sobic001G064200 Sobic008G152600 Sobic008G152600 Sobic003G242000--Sobic008G152600 Sobic001G409300 Sobic001G409300 Sobic003G242000--Sobic001G409300 Sobic008G059100 Sobic008G059100 Sobic003G242000--Sobic008G059100 Sobic003G242000--Sobic006G002300 Sobic006G257800 Sobic006G257800 Sobic001G062300--Sobic006G257800 Sobic004G189200 Sobic004G189200 Sobic001G062300--Sobic004G189200 Sobic006G275100 Sobic006G275100 Sobic001G062300--Sobic006G275100 Sobic008G167600 Sobic008G167600 Sobic001G062300--Sobic008G167600 Sobic007G190000 Sobic007G190000 Sobic001G062300--Sobic007G190000 Sobic001G062300--Sobic004G211866 Sobic003G301500 Sobic003G301500 Sobic001G062300--Sobic003G301500 Sobic001G062300--Sobic010G272800 Sobic001G062300--Sobic002G383600
Octagon: transcription factors


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