Gene annotation
Transcriptome id Sobic.010G169000.1
Synonym Sb10g022190, MRP6,MRP6, ATMRP6
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Multi-drugresistance-associated protein 6 (PubMedID : 26320239)
ABC transporter, ATP-binding protein, putative, expressed
UniProt A0A194YKS3
Pfam PF00664 PF00005
Panther DB PTHR24223 PTHR24223:SF211
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0006810transport GO:0005524ATP binding GO:0016887ATPase activity


Orthologs (automatic annotation)
TAIR AT3G21250 : multidrug resistance-associated protein 6
RAP-DB (Rice) LOC_Os05g10730.1 : ABC transporter, ATP-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a051011 , Zm00025a051012 , Zm00025a051013
Brachypodium PNT75774 , PNT75775 , PNT75776 , PNT75777 , KQK17970
Barley HORVU7Hr1G088210.41 , HORVU7Hr1G088210.40 , HORVU7Hr1G088210.43 , HORVU7Hr1G088210.42 , HORVU7Hr1G088210.45 , HORVU7Hr1G088210.44 , HORVU7Hr1G088210.5 , HORVU7Hr1G088210.23 , HORVU7Hr1G088210.22 , HORVU7Hr1G088210.21 , HORVU7Hr1G088210.20 , HORVU7Hr1G088210.27 , HORVU7Hr1G088210.26 , HORVU7Hr1G088210.25 , HORVU7Hr1G088210.24 , HORVU7Hr1G088210.29 , HORVU7Hr1G088210.28 , HORVU7Hr1G088210.30 , HORVU7Hr1G088210.31 , HORVU7Hr1G088210.32 , HORVU7Hr1G088210.33 , HORVU7Hr1G088210.34 , HORVU7Hr1G088210.35 , HORVU7Hr1G088210.36 , HORVU7Hr1G088210.37 , HORVU7Hr1G088210.38 , HORVU7Hr1G088210.39 , HORVU7Hr1G088210.1 , HORVU7Hr1G088210.2 , HORVU7Hr1G088210.3 , HORVU7Hr1G088210.4 , HORVU7Hr1G088210.6 , HORVU7Hr1G088210.7 , HORVU7Hr1G088210.8 , HORVU7Hr1G088210.9 , HORVU7Hr1G088210.18 , HORVU7Hr1G088210.19 , HORVU7Hr1G088210.12 , HORVU7Hr1G088210.13 , HORVU7Hr1G088210.10 , HORVU7Hr1G088210.11 , HORVU7Hr1G088210.16 , HORVU7Hr1G088210.17 , HORVU7Hr1G088210.14 , HORVU7Hr1G088210.15
Wheat TraesCS7D02G364700 , TraesCS6D02G000300 , TraesCS7B02G269700 , TraesCS7B02G269700 , TraesCS7A02G358100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G329300 leucine aminopeptidase, chloroplast precursor, putative, expressed K01255: CARP, leucyl aminopeptidase
2 Sobic.007G210500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed -
3 Sobic.001G282600 transporter family protein, putative, expressed -
4 Sobic.004G042300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.001G217400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1336 domain containing protein, expressed -
6 Sobic.004G053700 glyoxalase family protein, putative, expressed K00457: HPD, 4-hydroxyphenylpyruvate dioxygenase
7 Sobic.006G214200 aminotransferase, putative, expressed K16871: 4-aminobutyrate---pyruvate transaminase
8 Sobic.010G107000 phosphatidylinositol-4-phosphate 5-Kinase family protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
9 Sobic.003G355600 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
10 Sobic.008G062200 dehydrogenase E1 component domain containing protein, expressed K00166: BCKDHA, 2-oxoisovalerate dehydrogenase E1 component alpha subunit
11 Sobic.009G193700 transmembrane protein 56, putative, expressed -
12 Sobic.002G262300 lecithine cholesterol acyltransferase, putative, expressed -
13 Sobic.002G009700 AMP-binding domain containing protein, expressed -
14 Sobic.009G080400 hydroquinone glucosyltransferase, putative, expressed K08237: hydroquinone glucosyltransferase
15 Sobic.003G322700 expressed protein -
16 Sobic.009G029600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutamate--cysteine ligase, chloroplast precursor, putative, expressed K01919: glutamate--cysteine ligase
17 Sobic.003G257100 YT521-B-like family domain containing protein, expressed -
18 Sobic.006G104600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.003G320700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.004G225200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein nitrilase 4 NIT4 (Os)(PubMedID : 27208977)@nitrilase, putative, expressed K13035: beta-cyano-L-alanine hydratase/nitrilase


Gene co-expression network
sample Sobic010G169000 Sobic010G169000 Sobic004G329300 Sobic004G329300 Sobic010G169000--Sobic004G329300 Sobic007G210500 Sobic007G210500 Sobic010G169000--Sobic007G210500 Sobic001G282600 Sobic001G282600 Sobic010G169000--Sobic001G282600 Sobic004G042300 Sobic004G042300 Sobic010G169000--Sobic004G042300 Sobic001G217400 Sobic001G217400 Sobic010G169000--Sobic001G217400 Sobic004G053700 Sobic004G053700 Sobic010G169000--Sobic004G053700 Sobic006G214200 Sobic006G214200 Sobic010G169000--Sobic006G214200 Sobic010G107000 Sobic010G107000 Sobic010G169000--Sobic010G107000 Sobic003G355600 Sobic003G355600 Sobic010G169000--Sobic003G355600 Sobic004G329300--Sobic001G282600 Sobic004G329300--Sobic010G169000 Sobic002G266000 Sobic002G266000 Sobic004G329300--Sobic002G266000 Sobic006G104600 Sobic006G104600 Sobic004G329300--Sobic006G104600 Sobic004G225200 Sobic004G225200 Sobic004G329300--Sobic004G225200 Sobic009G193700 Sobic009G193700 Sobic004G329300--Sobic009G193700 Sobic003G257100 Sobic003G257100 Sobic004G329300--Sobic003G257100 Sobic003G322700 Sobic003G322700 Sobic004G329300--Sobic003G322700 Sobic007G004500 Sobic007G004500 Sobic004G329300--Sobic007G004500 Sobic007G210500--Sobic001G282600 Sobic002G262300 Sobic002G262300 Sobic007G210500--Sobic002G262300 Sobic009G080400 Sobic009G080400 Sobic007G210500--Sobic009G080400 Sobic007G210500--Sobic010G169000 Sobic001G305500 Sobic001G305500 Sobic007G210500--Sobic001G305500 Sobic003G051600 Sobic003G051600 Sobic007G210500--Sobic003G051600 Sobic007G210500--Sobic006G104600 Sobic007G210500--Sobic001G217400 Sobic007G210500--Sobic004G225200 Sobic001G282600--Sobic002G266000 Sobic001G282600--Sobic006G104600 Sobic006G199000 Sobic006G199000 Sobic001G282600--Sobic006G199000 Sobic001G282600--Sobic004G225200 Sobic001G282600--Sobic007G210500 Sobic001G282600--Sobic004G329300 Sobic008G153400 Sobic008G153400 Sobic001G282600--Sobic008G153400 Sobic001G282600--Sobic003G355600 Sobic001G282600--Sobic003G322700 Sobic006G052100 Sobic006G052100 Sobic004G042300--Sobic006G052100 Sobic004G042300--Sobic009G193700 Sobic008G062200 Sobic008G062200 Sobic004G042300--Sobic008G062200 Sobic004G102400 Sobic004G102400 Sobic004G042300--Sobic004G102400 Sobic003G320700 Sobic003G320700 Sobic004G042300--Sobic003G320700 Sobic003G329400 Sobic003G329400 Sobic004G042300--Sobic003G329400 Sobic002G132000 Sobic002G132000 Sobic004G042300--Sobic002G132000 Sobic001G089800 Sobic001G089800 Sobic004G042300--Sobic001G089800 Sobic001G290000 Sobic001G290000 Sobic004G042300--Sobic001G290000 Sobic010G072400 Sobic010G072400 Sobic001G217400--Sobic010G072400 Sobic001G350900 Sobic001G350900 Sobic001G217400--Sobic001G350900 Sobic001G350700 Sobic001G350700 Sobic001G217400--Sobic001G350700 Sobic004G211900 Sobic004G211900 Sobic001G217400--Sobic004G211900 Sobic003G269800 Sobic003G269800 Sobic001G217400--Sobic003G269800 Sobic001G217400--Sobic003G320700 Sobic001G217400--Sobic007G210500 Sobic003G101850 Sobic003G101850 Sobic001G217400--Sobic003G101850 Sobic006G271200 Sobic006G271200 Sobic001G217400--Sobic006G271200 Sobic006G087700 Sobic006G087700 Sobic004G053700--Sobic006G087700 Sobic002G230100 Sobic002G230100 Sobic004G053700--Sobic002G230100 Sobic004G053700--Sobic003G322700 Sobic004G053700--Sobic004G042300 Sobic007G075400 Sobic007G075400 Sobic004G053700--Sobic007G075400 Sobic004G053700--Sobic010G169000 Sobic004G053700--Sobic003G320700 Sobic004G331100 Sobic004G331100 Sobic004G053700--Sobic004G331100 Sobic002G009700 Sobic002G009700 Sobic004G053700--Sobic002G009700 Sobic006G214200--Sobic003G257100 Sobic009G029600 Sobic009G029600 Sobic006G214200--Sobic009G029600 Sobic006G214200--Sobic010G107000 Sobic006G214200--Sobic008G153400 Sobic006G214200--Sobic003G355600 Sobic009G211400 Sobic009G211400 Sobic006G214200--Sobic009G211400 Sobic006G214200--Sobic006G199000 Sobic006G204900 Sobic006G204900 Sobic006G214200--Sobic006G204900 Sobic003G138200 Sobic003G138200 Sobic006G214200--Sobic003G138200 Sobic010G107000--Sobic009G211400 Sobic001G325200 Sobic001G325200 Sobic010G107000--Sobic001G325200 Sobic010G107000--Sobic009G193700 Sobic010G107000--Sobic003G355600 Sobic003G219600 Sobic003G219600 Sobic010G107000--Sobic003G219600 Sobic001G150200 Sobic001G150200 Sobic010G107000--Sobic001G150200 Sobic010G107000--Sobic009G029600 Sobic009G226300 Sobic009G226300 Sobic010G107000--Sobic009G226300 Sobic010G107000--Sobic003G138200 Sobic003G355600--Sobic008G062200 Sobic003G355600--Sobic001G325200 Sobic002G304000 Sobic002G304000 Sobic003G355600--Sobic002G304000 Sobic003G355600--Sobic009G226300 Sobic003G355600--Sobic010G107000 Sobic003G355600--Sobic006G199000 Sobic003G355600--Sobic002G009700 Sobic003G355600--Sobic009G193700 Sobic004G101900 Sobic004G101900 Sobic003G355600--Sobic004G101900
Octagon: transcription factors


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