Gene annotation
Transcriptome id Sobic.004G329300.1
Synonym Sb04g035840
Functional annotation leucine aminopeptidase, chloroplast precursor, putative, expressed
UniProt C5XUF6
Pfam PF02789 PF00883
Panther DB PTHR11963 PTHR11963:SF17
NCBI CDD KOG2597; Predicted aminopeptidase of the M17 family
KEGG Orthology K01255; CARP, leucyl aminopeptidase
Gene Ontology GO:0006508; proteolysis GO:0005622intracellular GO:0004177aminopeptidase activity


Orthologs (automatic annotation)
TAIR AT2G24200 : Cytosol aminopeptidase family protein
RAP-DB (Rice) LOC_Os02g55140.1 : leucine aminopeptidase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a003934 , Zm00025a017920 , Zm00025a043333 , Zm00025a004062 , Zm00025a046631 , Zm00025a058178 , Zm00025a022458
Brachypodium KQK01133 , KQJ96129
Barley HORVU1Hr1G022430.18 , HORVU1Hr1G022430.19 , HORVU1Hr1G022430.10 , HORVU1Hr1G022430.6 , HORVU1Hr1G022430.12 , HORVU1Hr1G022430.13 , HORVU1Hr1G022430.14 , HORVU1Hr1G022430.15 , HORVU1Hr1G022430.16 , HORVU1Hr1G022430.4 , HORVU1Hr1G022430.5 , HORVU5Hr1G123610.1 , HORVU1Hr1G022430.11 , HORVU1Hr1G022430.25 , HORVU1Hr1G022430.24 , HORVU1Hr1G022430.27 , HORVU1Hr1G022430.26 , HORVU1Hr1G022430.21 , HORVU1Hr1G022430.20 , HORVU1Hr1G022430.23 , HORVU1Hr1G022430.22 , HORVU1Hr1G022430.9 , HORVU1Hr1G022430.17 , HORVU1Hr1G022430.1 , HORVU1Hr1G022430.7 , HORVU1Hr1G022430.2 , HORVU1Hr1G022430.3
Wheat TraesCS1A02G095800 , TraesCS1A02G095800 , TraesCS1A02G095800 , TraesCS1A02G095800 , TraesCS6B02G389200 , TraesCS1D02G104800 , TraesCS1D02G104800 , TraesCS1D02G104800 , TraesCS6A02G357200 , TraesCS6D02G339200
Populus -


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cDNA sequences
Sobic.004G329300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G282600 transporter family protein, putative, expressed -
2 Sobic.010G169000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Multi-drugresistance-associated protein 6(PubMedID : 26320239)@ABC transporter, ATP-binding protein, putative, expressed -
3 Sobic.002G266000 ankyrin repeat-containing protein, putative, expressed -
4 Sobic.006G104600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.004G225200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein nitrilase 4 NIT4 (Os)(PubMedID : 27208977)@nitrilase, putative, expressed K13035: beta-cyano-L-alanine hydratase/nitrilase
6 Sobic.009G193700 transmembrane protein 56, putative, expressed -
7 Sobic.003G257100 YT521-B-like family domain containing protein, expressed -
8 Sobic.003G322700 expressed protein -
9 Sobic.007G004500 phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
10 Sobic.001G462500 natural resistance-associated macrophage protein, putative, expressed K12347: SLC11A1, natural resistance-associated macrophage protein 1
11 Sobic.006G064600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AMP-binding enzyme, putative, expressed K01895: ACSS1_2, acetyl-CoA synthetase
12 Sobic.006G199000 pathogenesis-related Bet v I family protein, putative, expressed -
13 Sobic.001G089800 nuclear prelamin A recognition factor, putative, expressed -
14 Sobic.009G080400 hydroquinone glucosyltransferase, putative, expressed K08237: hydroquinone glucosyltransferase
15 Sobic.006G028900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
16 Sobic.007G210500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed -
17 Sobic.004G225100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein nitrilase 4 NIT4 (Os)(PubMedID : 27208977)@Protein nitrilase 4 NIT4 (Os)(PubMedID : 27208977)@nitrilase, putative, expressed K01501: nitrilase
18 Sobic.003G320700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.008G153400 peptidase, putative, expressed K18151: ureidoglycolate amidohydrolase
20 Sobic.004G341200 Glutathione reductases(PubMedID : 23783412)@glutathione reductase, putative, expressed K00383: GSR, glutathione reductase (NADPH)


Gene co-expression network
sample Sobic004G329300 Sobic004G329300 Sobic001G282600 Sobic001G282600 Sobic004G329300--Sobic001G282600 Sobic010G169000 Sobic010G169000 Sobic004G329300--Sobic010G169000 Sobic002G266000 Sobic002G266000 Sobic004G329300--Sobic002G266000 Sobic006G104600 Sobic006G104600 Sobic004G329300--Sobic006G104600 Sobic004G225200 Sobic004G225200 Sobic004G329300--Sobic004G225200 Sobic009G193700 Sobic009G193700 Sobic004G329300--Sobic009G193700 Sobic003G257100 Sobic003G257100 Sobic004G329300--Sobic003G257100 Sobic003G322700 Sobic003G322700 Sobic004G329300--Sobic003G322700 Sobic007G004500 Sobic007G004500 Sobic004G329300--Sobic007G004500 Sobic001G282600--Sobic002G266000 Sobic001G282600--Sobic006G104600 Sobic006G199000 Sobic006G199000 Sobic001G282600--Sobic006G199000 Sobic001G282600--Sobic004G225200 Sobic007G210500 Sobic007G210500 Sobic001G282600--Sobic007G210500 Sobic001G282600--Sobic004G329300 Sobic008G153400 Sobic008G153400 Sobic001G282600--Sobic008G153400 Sobic003G355600 Sobic003G355600 Sobic001G282600--Sobic003G355600 Sobic001G282600--Sobic003G322700 Sobic010G169000--Sobic004G329300 Sobic010G169000--Sobic007G210500 Sobic010G169000--Sobic001G282600 Sobic004G042300 Sobic004G042300 Sobic010G169000--Sobic004G042300 Sobic001G217400 Sobic001G217400 Sobic010G169000--Sobic001G217400 Sobic004G053700 Sobic004G053700 Sobic010G169000--Sobic004G053700 Sobic006G214200 Sobic006G214200 Sobic010G169000--Sobic006G214200 Sobic010G107000 Sobic010G107000 Sobic010G169000--Sobic010G107000 Sobic010G169000--Sobic003G355600 Sobic002G266000--Sobic003G322700 Sobic002G266000--Sobic001G282600 Sobic002G266000--Sobic006G104600 Sobic002G249200 Sobic002G249200 Sobic002G266000--Sobic002G249200 Sobic004G261900 Sobic004G261900 Sobic002G266000--Sobic004G261900 Sobic002G266000--Sobic007G004500 Sobic004G034600 Sobic004G034600 Sobic002G266000--Sobic004G034600 Sobic005G149700 Sobic005G149700 Sobic002G266000--Sobic005G149700 Sobic002G266000--Sobic004G225200 Sobic006G104600--Sobic001G282600 Sobic006G104600--Sobic002G266000 Sobic003G320700 Sobic003G320700 Sobic006G104600--Sobic003G320700 Sobic001G305500 Sobic001G305500 Sobic006G104600--Sobic001G305500 Sobic002G128200 Sobic002G128200 Sobic006G104600--Sobic002G128200 Sobic006G104600--Sobic003G322700 Sobic006G104600--Sobic006G199000 Sobic006G104600--Sobic005G149700 Sobic006G104600--Sobic004G225200 Sobic004G225100 Sobic004G225100 Sobic004G225200--Sobic004G225100 Sobic004G225200--Sobic001G282600 Sobic004G225200--Sobic002G266000 Sobic004G225200--Sobic006G199000 Sobic003G398100 Sobic003G398100 Sobic004G225200--Sobic003G398100 Sobic004G225200--Sobic006G104600 Sobic004G071200 Sobic004G071200 Sobic004G225200--Sobic004G071200 Sobic004G225200--Sobic003G322700 Sobic005G178100 Sobic005G178100 Sobic004G225200--Sobic005G178100 Sobic009G193700--Sobic010G107000 Sobic008G062200 Sobic008G062200 Sobic009G193700--Sobic008G062200 Sobic009G211400 Sobic009G211400 Sobic009G193700--Sobic009G211400 Sobic009G193700--Sobic003G355600 Sobic009G029600 Sobic009G029600 Sobic009G193700--Sobic009G029600 Sobic004G260000 Sobic004G260000 Sobic009G193700--Sobic004G260000 Sobic003G219600 Sobic003G219600 Sobic009G193700--Sobic003G219600 Sobic009G193700--Sobic006G199000 Sobic001G089800 Sobic001G089800 Sobic009G193700--Sobic001G089800 Sobic003G257100--Sobic009G029600 Sobic003G257100--Sobic006G199000 Sobic003G257100--Sobic008G153400 Sobic003G257100--Sobic003G398100 Sobic003G257100--Sobic010G107000 Sobic002G352800 Sobic002G352800 Sobic003G257100--Sobic002G352800 Sobic003G257100--Sobic009G211400 Sobic006G030700 Sobic006G030700 Sobic003G257100--Sobic006G030700 Sobic002G409500 Sobic002G409500 Sobic003G257100--Sobic002G409500 Sobic003G322700--Sobic002G266000 Sobic006G204900 Sobic006G204900 Sobic003G322700--Sobic006G204900 Sobic010G001500 Sobic010G001500 Sobic003G322700--Sobic010G001500 Sobic004G355000 Sobic004G355000 Sobic003G322700--Sobic004G355000 Sobic001G207400 Sobic001G207400 Sobic003G322700--Sobic001G207400 Sobic003G322700--Sobic003G355600 Sobic006G087700 Sobic006G087700 Sobic003G322700--Sobic006G087700 Sobic003G322700--Sobic006G199000 Sobic003G322700--Sobic004G034600 Sobic007G004500--Sobic002G266000 Sobic002G430000 Sobic002G430000 Sobic007G004500--Sobic002G430000 Sobic001G085300 Sobic001G085300 Sobic007G004500--Sobic001G085300 Sobic001G390800 Sobic001G390800 Sobic007G004500--Sobic001G390800 Sobic001G016700 Sobic001G016700 Sobic007G004500--Sobic001G016700 Sobic007G004500--Sobic003G322700 Sobic010G139600 Sobic010G139600 Sobic007G004500--Sobic010G139600 Sobic004G065000 Sobic004G065000 Sobic007G004500--Sobic004G065000 Sobic009G133500 Sobic009G133500 Sobic007G004500--Sobic009G133500
Octagon: transcription factors


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