Gene annotation
Transcriptome id Sobic.004G225100.1,Sobic.004G225100.2
Synonym Sb04g026940, NIT4, AtNIT4
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Protein nitrilase 4 NIT4 (Os) (PubMedID : 27208977)
Protein nitrilase 4 NIT4 (Os) (PubMedID : 27208977)
nitrilase, putative, expressed
UniProt A0A194YR77 , A0A194YS86
Pfam PF00795
Panther DB PTHR23088 PTHR23088:SF31
NCBI CDD KOG0805; Carbon-nitrogen hydrolase
KEGG Orthology K01501; nitrilase
Gene Ontology GO:0016810; hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds GO:0006807nitrogen compound metabolic process


Orthologs (automatic annotation)
TAIR AT5G22300 : nitrilase 4
RAP-DB (Rice) LOC_Os02g42330.1 : nitrilase, putative, expressed
MaizeGDB (Corn) Zm00025a021016 , Zm00025a032087
Brachypodium -
Barley HORVU6Hr1G059740.1 , HORVU6Hr1G059730.1 , HORVU6Hr1G059730.2 , HORVU6Hr1G059730.4
Wheat TraesCS6D02G215300 , TraesCS6D02G215400 , TraesCS6D02G215400 , TraesCS6D02G215400 , TraesCS6B02G260800 , TraesCS6B02G260800 , TraesCS6B02G260700 , TraesCS6B02G260700 , TraesCS6A02G232400 , TraesCS6A02G232400 , TraesCS6A02G232500 , TraesCS6A02G232500 , TraesCS6A02G232300 , TraesCS6B02G261000
Populus -


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cDNA sequences
Sobic.004G225100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G225200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein nitrilase 4 NIT4 (Os)(PubMedID : 27208977)@nitrilase, putative, expressed K13035: beta-cyano-L-alanine hydratase/nitrilase
2 Sobic.002G244100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.001G334600 OsFBX95 - F-box domain containing protein, expressed -
4 Sobic.009G167700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
5 Sobic.003G388251 - K01166: ribonuclease T2
6 Sobic.005G178100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@F-box/Kelch-repeat protein, putative, expressed -
7 Sobic.003G354400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyl-coenzyme A oxidase, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
8 Sobic.001G305800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@U-box domain containing protein, expressed -
9 Sobic.002G087800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@1-aminocyclopropane-1-carboxylate oxidase 2, putative, expressed -
10 Sobic.003G265100 lipid phosphatase protein, putative, expressed -
11 Sobic.004G071200 limonoid UDP-glucosyltransferase, putative, expressed -
12 Sobic.008G074400 glutathione S-transferase, putative, expressed K01800: maiA, maleylacetoacetate isomerase
13 Sobic.006G247100 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
14 Sobic.004G329300 leucine aminopeptidase, chloroplast precursor, putative, expressed K01255: CARP, leucyl aminopeptidase
15 Sobic.006G091700 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
16 Sobic.001G089800 nuclear prelamin A recognition factor, putative, expressed -
17 Sobic.009G161000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
18 Sobic.009G057300 acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
19 Sobic.002G266000 ankyrin repeat-containing protein, putative, expressed -
20 Sobic.008G179900 cysteine synthase, putative, expressed K01738: cysteine synthase


Gene co-expression network
sample Sobic004G225100 Sobic004G225100 Sobic004G225200 Sobic004G225200 Sobic004G225100--Sobic004G225200 Sobic002G244100 Sobic002G244100 Sobic004G225100--Sobic002G244100 Sobic001G334600 Sobic001G334600 Sobic004G225100--Sobic001G334600 Sobic009G167700 Sobic009G167700 Sobic004G225100--Sobic009G167700 Sobic003G388251 Sobic003G388251 Sobic004G225100--Sobic003G388251 Sobic005G178100 Sobic005G178100 Sobic004G225100--Sobic005G178100 Sobic003G354400 Sobic003G354400 Sobic004G225100--Sobic003G354400 Sobic001G305800 Sobic001G305800 Sobic004G225100--Sobic001G305800 Sobic002G087800 Sobic002G087800 Sobic004G225100--Sobic002G087800 Sobic004G225200--Sobic004G225100 Sobic001G282600 Sobic001G282600 Sobic004G225200--Sobic001G282600 Sobic002G266000 Sobic002G266000 Sobic004G225200--Sobic002G266000 Sobic006G199000 Sobic006G199000 Sobic004G225200--Sobic006G199000 Sobic003G398100 Sobic003G398100 Sobic004G225200--Sobic003G398100 Sobic006G104600 Sobic006G104600 Sobic004G225200--Sobic006G104600 Sobic004G071200 Sobic004G071200 Sobic004G225200--Sobic004G071200 Sobic003G322700 Sobic003G322700 Sobic004G225200--Sobic003G322700 Sobic004G225200--Sobic005G178100 Sobic002G244100--Sobic009G167700 Sobic001G089800 Sobic001G089800 Sobic002G244100--Sobic001G089800 Sobic008G093000 Sobic008G093000 Sobic002G244100--Sobic008G093000 Sobic002G244100--Sobic004G225100 Sobic002G244100--Sobic003G354400 Sobic010G064600 Sobic010G064600 Sobic002G244100--Sobic010G064600 Sobic004G167400 Sobic004G167400 Sobic002G244100--Sobic004G167400 Sobic002G244100--Sobic001G334600 Sobic009G126900 Sobic009G126900 Sobic002G244100--Sobic009G126900 Sobic009G057300 Sobic009G057300 Sobic001G334600--Sobic009G057300 Sobic001G334600--Sobic003G354400 Sobic004G101900 Sobic004G101900 Sobic001G334600--Sobic004G101900 Sobic003G061800 Sobic003G061800 Sobic001G334600--Sobic003G061800 Sobic001G111150 Sobic001G111150 Sobic001G334600--Sobic001G111150 Sobic001G334600--Sobic004G225100 Sobic001G334600--Sobic006G199000 Sobic001G015500 Sobic001G015500 Sobic001G334600--Sobic001G015500 Sobic010G264700 Sobic010G264700 Sobic001G334600--Sobic010G264700 Sobic009G167700--Sobic002G244100 Sobic004G341200 Sobic004G341200 Sobic009G167700--Sobic004G341200 Sobic004G102400 Sobic004G102400 Sobic009G167700--Sobic004G102400 Sobic001G386400 Sobic001G386400 Sobic009G167700--Sobic001G386400 Sobic010G016400 Sobic010G016400 Sobic009G167700--Sobic010G016400 Sobic009G167700--Sobic001G089800 Sobic009G167700--Sobic003G354400 Sobic001G132000 Sobic001G132000 Sobic009G167700--Sobic001G132000 Sobic006G119200 Sobic006G119200 Sobic009G167700--Sobic006G119200 Sobic004G124200 Sobic004G124200 Sobic003G388251--Sobic004G124200 Sobic007G068100 Sobic007G068100 Sobic003G388251--Sobic007G068100 Sobic001G325200 Sobic001G325200 Sobic003G388251--Sobic001G325200 Sobic001G474500 Sobic001G474500 Sobic003G388251--Sobic001G474500 Sobic003G388251--Sobic004G101900 Sobic003G388251--Sobic005G178100 Sobic009G034700 Sobic009G034700 Sobic003G388251--Sobic009G034700 Sobic003G388251--Sobic009G057300 Sobic003G388251--Sobic001G015500 Sobic009G161000 Sobic009G161000 Sobic005G178100--Sobic009G161000 Sobic005G178100--Sobic001G305800 Sobic003G087200 Sobic003G087200 Sobic005G178100--Sobic003G087200 Sobic002G420700 Sobic002G420700 Sobic005G178100--Sobic002G420700 Sobic005G178100--Sobic001G015500 Sobic003G105800 Sobic003G105800 Sobic005G178100--Sobic003G105800 Sobic005G178100--Sobic009G034700 Sobic003G184900 Sobic003G184900 Sobic005G178100--Sobic003G184900 Sobic001G150600 Sobic001G150600 Sobic005G178100--Sobic001G150600 Sobic003G354400--Sobic003G061800 Sobic003G329400 Sobic003G329400 Sobic003G354400--Sobic003G329400 Sobic003G354400--Sobic009G057300 Sobic010G130200 Sobic010G130200 Sobic003G354400--Sobic010G130200 Sobic008G144401 Sobic008G144401 Sobic003G354400--Sobic008G144401 Sobic001G120300 Sobic001G120300 Sobic003G354400--Sobic001G120300 Sobic003G354400--Sobic001G111150 Sobic008G147700 Sobic008G147700 Sobic003G354400--Sobic008G147700 Sobic003G354400--Sobic009G126900 Sobic001G305800--Sobic005G178100 Sobic006G030700 Sobic006G030700 Sobic001G305800--Sobic006G030700 Sobic001G305800--Sobic001G150600 Sobic001G305800--Sobic009G161000 Sobic006G100332 Sobic006G100332 Sobic001G305800--Sobic006G100332 Sobic001G305800--Sobic003G087200 Sobic009G226300 Sobic009G226300 Sobic001G305800--Sobic009G226300 Sobic009G054500 Sobic009G054500 Sobic001G305800--Sobic009G054500 Sobic007G092900 Sobic007G092900 Sobic001G305800--Sobic007G092900 Sobic005G024900 Sobic005G024900 Sobic002G087800--Sobic005G024900 Sobic002G087800--Sobic009G057300 Sobic002G087800--Sobic003G388251 Sobic009G226600 Sobic009G226600 Sobic002G087800--Sobic009G226600 Sobic003G241500 Sobic003G241500 Sobic002G087800--Sobic003G241500 Sobic002G087800--Sobic001G474500 Sobic002G087800--Sobic003G061800 Sobic002G087800--Sobic001G305800 Sobic002G087800--Sobic005G178100
Octagon: transcription factors


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