Gene annotation
Transcriptome id Sobic.002G244100.1
Synonym Sb02g028090
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A1B6QD85
Pfam PF07889
Panther DB PTHR31903 PTHR31903:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G04960 : Protein of unknown function (DUF1664)
RAP-DB (Rice) LOC_Os09g30478.1 : expressed protein
MaizeGDB (Corn) Zm00025a047418
Brachypodium KQJ90715
Barley HORVU5Hr1G072530.4 , HORVU5Hr1G072530.5 , HORVU5Hr1G072530.2 , HORVU5Hr1G072530.3 , HORVU5Hr1G072530.1
Wheat TraesCS5D02G269000
Populus -


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cDNA sequences
Sobic.002G244100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G167700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
2 Sobic.001G089800 nuclear prelamin A recognition factor, putative, expressed -
3 Sobic.008G093000 ABC transporter, ATP-binding protein, putative, expressed K06185: ATP-binding cassette, subfamily F, member 2
4 Sobic.004G225100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein nitrilase 4 NIT4 (Os)(PubMedID : 27208977)@Protein nitrilase 4 NIT4 (Os)(PubMedID : 27208977)@nitrilase, putative, expressed K01501: nitrilase
5 Sobic.003G354400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyl-coenzyme A oxidase, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
6 Sobic.010G064600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@LIM domain-containing protein, putative, expressed -
7 Sobic.004G167400 expressed protein -
8 Sobic.001G334600 OsFBX95 - F-box domain containing protein, expressed -
9 Sobic.009G126900 mitochondrial carrier protein, putative, expressed -
10 Sobic.001G270400 OsPOP20 - Putative Prolyl Oligopeptidase homologue, expressed -
11 Sobic.004G097400 mitochondrial carrier protein, putative, expressed K15084: SLC25A16, GDA, solute carrier family 25 (mitochondrial carrier protein), member 16
12 Sobic.004G341200 Glutathione reductases(PubMedID : 23783412)@glutathione reductase, putative, expressed K00383: GSR, glutathione reductase (NADPH)
13 Sobic.004G102400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FYVE zinc finger domain containing protein, expressed -
14 Sobic.004G042300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.006G192700 expressed protein -
16 Sobic.002G424000 transcription factor, putative, expressed K14431: transcription factor TGA
17 Sobic.005G150800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@yippee zinc-binding protein, putative, expressed -
18 Sobic.001G137100 homeodomain protein, putative, expressed -
19 Sobic.004G275700 adaptor complexes medium subunit family domain containing protein, expressed K11826: AP-2 complex subunit mu-1
20 Sobic.001G003000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OTU-like cysteine protease family protein, putative, expressed -


Gene co-expression network
sample Sobic002G244100 Sobic002G244100 Sobic009G167700 Sobic009G167700 Sobic002G244100--Sobic009G167700 Sobic001G089800 Sobic001G089800 Sobic002G244100--Sobic001G089800 Sobic008G093000 Sobic008G093000 Sobic002G244100--Sobic008G093000 Sobic004G225100 Sobic004G225100 Sobic002G244100--Sobic004G225100 Sobic003G354400 Sobic003G354400 Sobic002G244100--Sobic003G354400 Sobic010G064600 Sobic010G064600 Sobic002G244100--Sobic010G064600 Sobic004G167400 Sobic004G167400 Sobic002G244100--Sobic004G167400 Sobic001G334600 Sobic001G334600 Sobic002G244100--Sobic001G334600 Sobic009G126900 Sobic009G126900 Sobic002G244100--Sobic009G126900 Sobic009G167700--Sobic002G244100 Sobic004G341200 Sobic004G341200 Sobic009G167700--Sobic004G341200 Sobic004G102400 Sobic004G102400 Sobic009G167700--Sobic004G102400 Sobic001G386400 Sobic001G386400 Sobic009G167700--Sobic001G386400 Sobic010G016400 Sobic010G016400 Sobic009G167700--Sobic010G016400 Sobic009G167700--Sobic001G089800 Sobic009G167700--Sobic003G354400 Sobic001G132000 Sobic001G132000 Sobic009G167700--Sobic001G132000 Sobic006G119200 Sobic006G119200 Sobic009G167700--Sobic006G119200 Sobic001G003000 Sobic001G003000 Sobic001G089800--Sobic001G003000 Sobic001G089800--Sobic004G341200 Sobic009G193700 Sobic009G193700 Sobic001G089800--Sobic009G193700 Sobic006G271200 Sobic006G271200 Sobic001G089800--Sobic006G271200 Sobic001G089800--Sobic009G167700 Sobic001G089800--Sobic002G244100 Sobic001G089800--Sobic004G102400 Sobic001G089800--Sobic010G064600 Sobic001G089800--Sobic003G354400 Sobic001G199100 Sobic001G199100 Sobic008G093000--Sobic001G199100 Sobic008G093000--Sobic010G064600 Sobic001G301700 Sobic001G301700 Sobic008G093000--Sobic001G301700 Sobic003G312200 Sobic003G312200 Sobic008G093000--Sobic003G312200 Sobic004G275700 Sobic004G275700 Sobic008G093000--Sobic004G275700 Sobic010G229400 Sobic010G229400 Sobic008G093000--Sobic010G229400 Sobic009G207000 Sobic009G207000 Sobic008G093000--Sobic009G207000 Sobic003G087000 Sobic003G087000 Sobic008G093000--Sobic003G087000 Sobic008G093000--Sobic002G244100 Sobic004G225200 Sobic004G225200 Sobic004G225100--Sobic004G225200 Sobic004G225100--Sobic002G244100 Sobic004G225100--Sobic001G334600 Sobic004G225100--Sobic009G167700 Sobic003G388251 Sobic003G388251 Sobic004G225100--Sobic003G388251 Sobic005G178100 Sobic005G178100 Sobic004G225100--Sobic005G178100 Sobic004G225100--Sobic003G354400 Sobic001G305800 Sobic001G305800 Sobic004G225100--Sobic001G305800 Sobic002G087800 Sobic002G087800 Sobic004G225100--Sobic002G087800 Sobic003G061800 Sobic003G061800 Sobic003G354400--Sobic003G061800 Sobic003G329400 Sobic003G329400 Sobic003G354400--Sobic003G329400 Sobic009G057300 Sobic009G057300 Sobic003G354400--Sobic009G057300 Sobic010G130200 Sobic010G130200 Sobic003G354400--Sobic010G130200 Sobic008G144401 Sobic008G144401 Sobic003G354400--Sobic008G144401 Sobic001G120300 Sobic001G120300 Sobic003G354400--Sobic001G120300 Sobic001G111150 Sobic001G111150 Sobic003G354400--Sobic001G111150 Sobic008G147700 Sobic008G147700 Sobic003G354400--Sobic008G147700 Sobic003G354400--Sobic009G126900 Sobic010G064600--Sobic003G087000 Sobic010G064600--Sobic008G093000 Sobic010G261600 Sobic010G261600 Sobic010G064600--Sobic010G261600 Sobic004G228800 Sobic004G228800 Sobic010G064600--Sobic004G228800 Sobic010G184300 Sobic010G184300 Sobic010G064600--Sobic010G184300 Sobic006G281800 Sobic006G281800 Sobic010G064600--Sobic006G281800 Sobic009G072700 Sobic009G072700 Sobic010G064600--Sobic009G072700 Sobic010G064600--Sobic001G089800 Sobic010G064600--Sobic001G003000 Sobic010G000900 Sobic010G000900 Sobic004G167400--Sobic010G000900 Sobic002G166900 Sobic002G166900 Sobic004G167400--Sobic002G166900 Sobic001G329100 Sobic001G329100 Sobic004G167400--Sobic001G329100 Sobic003G257000 Sobic003G257000 Sobic004G167400--Sobic003G257000 Sobic010G253800 Sobic010G253800 Sobic004G167400--Sobic010G253800 Sobic002G352700 Sobic002G352700 Sobic004G167400--Sobic002G352700 Sobic003G117900 Sobic003G117900 Sobic004G167400--Sobic003G117900 Sobic001G057800 Sobic001G057800 Sobic004G167400--Sobic001G057800 Sobic004G167400--Sobic010G229400 Sobic001G334600--Sobic009G057300 Sobic001G334600--Sobic003G354400 Sobic004G101900 Sobic004G101900 Sobic001G334600--Sobic004G101900 Sobic001G334600--Sobic003G061800 Sobic001G334600--Sobic001G111150 Sobic001G334600--Sobic004G225100 Sobic006G199000 Sobic006G199000 Sobic001G334600--Sobic006G199000 Sobic001G015500 Sobic001G015500 Sobic001G334600--Sobic001G015500 Sobic010G264700 Sobic010G264700 Sobic001G334600--Sobic010G264700 Sobic010G043400 Sobic010G043400 Sobic009G126900--Sobic010G043400 Sobic002G270500 Sobic002G270500 Sobic009G126900--Sobic002G270500 Sobic002G009700 Sobic002G009700 Sobic009G126900--Sobic002G009700 Sobic009G126900--Sobic006G271200 Sobic009G126900--Sobic001G003000 Sobic004G124200 Sobic004G124200 Sobic009G126900--Sobic004G124200 Sobic003G005600 Sobic003G005600 Sobic009G126900--Sobic003G005600 Sobic009G126900--Sobic003G329400 Sobic009G126900--Sobic004G101900
Octagon: transcription factors


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