Gene annotation
Transcriptome id Sobic.004G167400.1
Synonym Sb04g021880
Functional annotation expressed protein
UniProt C5XU02
Pfam -
Panther DB PTHR34564 PTHR34564:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G22280 : -
RAP-DB (Rice) LOC_Os02g33290.2 : expressed protein
MaizeGDB (Corn) Zm00025a020566
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G000900 spotted leaf 11, putative, expressed -
2 Sobic.002G166900 ubiquitin-conjugating enzyme, putative, expressed K10580: UBE2N, BLU, ubiquitin-conjugating enzyme E2 N
3 Sobic.001G329100 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
4 Sobic.003G257000 THAP domain-containing protein 4, putative, expressed -
5 Sobic.010G253800 expressed protein -
6 Sobic.002G352700 expressed protein K08505: protein transport protein SFT1
7 Sobic.003G117900 protein kinase, putative, expressed -
8 Sobic.001G057800 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
9 Sobic.010G229400 polyprenyl synthetase, putative, expressed K14066: geranyl diphosphate synthase
10 Sobic.009G146100 RNA recognition motif containing protein, putative, expressed K12831: SF3B4, splicing factor 3B subunit 4
11 Sobic.002G385900 DCN1, putative, expressed K17822: DCN1-like protein 1/2
12 Sobic.001G393800 enoyl-CoA hydratase/isomerase family protein, putative, expressed -
13 Sobic.002G244100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.004G067100 homeobox protein knotted-1, putative, expressed -
15 Sobic.002G375300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FYVE zinc finger domain containing protein, expressed -
16 Sobic.005G150800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@yippee zinc-binding protein, putative, expressed -
17 Sobic.007G216100 expressed protein -
18 Sobic.004G212200 enhancer of rudimentary protein, putative, expressed -
19 Sobic.001G158500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@LSD1 zinc finger domain containing protein, expressed -
20 Sobic.006G281800 ras-related protein, putative, expressed K07910: Ras-related protein Rab-18


Gene co-expression network
sample Sobic004G167400 Sobic004G167400 Sobic010G000900 Sobic010G000900 Sobic004G167400--Sobic010G000900 Sobic002G166900 Sobic002G166900 Sobic004G167400--Sobic002G166900 Sobic001G329100 Sobic001G329100 Sobic004G167400--Sobic001G329100 Sobic003G257000 Sobic003G257000 Sobic004G167400--Sobic003G257000 Sobic010G253800 Sobic010G253800 Sobic004G167400--Sobic010G253800 Sobic002G352700 Sobic002G352700 Sobic004G167400--Sobic002G352700 Sobic003G117900 Sobic003G117900 Sobic004G167400--Sobic003G117900 Sobic001G057800 Sobic001G057800 Sobic004G167400--Sobic001G057800 Sobic010G229400 Sobic010G229400 Sobic004G167400--Sobic010G229400 Sobic002G400000 Sobic002G400000 Sobic010G000900--Sobic002G400000 Sobic003G012200 Sobic003G012200 Sobic010G000900--Sobic003G012200 Sobic001G047400 Sobic001G047400 Sobic010G000900--Sobic001G047400 Sobic003G261400 Sobic003G261400 Sobic010G000900--Sobic003G261400 Sobic004G130900 Sobic004G130900 Sobic010G000900--Sobic004G130900 Sobic001G051200 Sobic001G051200 Sobic010G000900--Sobic001G051200 Sobic001G323000 Sobic001G323000 Sobic010G000900--Sobic001G323000 Sobic001G388200 Sobic001G388200 Sobic010G000900--Sobic001G388200 Sobic001G085100 Sobic001G085100 Sobic010G000900--Sobic001G085100 Sobic006G090000 Sobic006G090000 Sobic002G166900--Sobic006G090000 Sobic004G067100 Sobic004G067100 Sobic002G166900--Sobic004G067100 Sobic001G283200 Sobic001G283200 Sobic002G166900--Sobic001G283200 Sobic002G385900 Sobic002G385900 Sobic002G166900--Sobic002G385900 Sobic010G188100 Sobic010G188100 Sobic002G166900--Sobic010G188100 Sobic002G166900--Sobic004G167400 Sobic004G321900 Sobic004G321900 Sobic002G166900--Sobic004G321900 Sobic004G212200 Sobic004G212200 Sobic002G166900--Sobic004G212200 Sobic001G220400 Sobic001G220400 Sobic002G166900--Sobic001G220400 Sobic006G264300 Sobic006G264300 Sobic001G329100--Sobic006G264300 Sobic005G195200 Sobic005G195200 Sobic001G329100--Sobic005G195200 Sobic002G264400 Sobic002G264400 Sobic001G329100--Sobic002G264400 Sobic001G329100--Sobic004G167400 Sobic002G180600 Sobic002G180600 Sobic001G329100--Sobic002G180600 Sobic001G329100--Sobic003G117900 Sobic001G329100--Sobic010G253800 Sobic002G122700 Sobic002G122700 Sobic001G329100--Sobic002G122700 Sobic006G254800 Sobic006G254800 Sobic001G329100--Sobic006G254800 Sobic003G257000--Sobic004G167400 Sobic003G257000--Sobic002G385900 Sobic001G199100 Sobic001G199100 Sobic003G257000--Sobic001G199100 Sobic006G192700 Sobic006G192700 Sobic003G257000--Sobic006G192700 Sobic003G257000--Sobic002G352700 Sobic004G119200 Sobic004G119200 Sobic003G257000--Sobic004G119200 Sobic003G257000--Sobic010G229400 Sobic003G257000--Sobic002G166900 Sobic008G093000 Sobic008G093000 Sobic003G257000--Sobic008G093000 Sobic009G146100 Sobic009G146100 Sobic010G253800--Sobic009G146100 Sobic004G293700 Sobic004G293700 Sobic010G253800--Sobic004G293700 Sobic010G083700 Sobic010G083700 Sobic010G253800--Sobic010G083700 Sobic002G247500 Sobic002G247500 Sobic010G253800--Sobic002G247500 Sobic010G253800--Sobic002G352700 Sobic001G007200 Sobic001G007200 Sobic010G253800--Sobic001G007200 Sobic006G263900 Sobic006G263900 Sobic010G253800--Sobic006G263900 Sobic009G171700 Sobic009G171700 Sobic010G253800--Sobic009G171700 Sobic001G054200 Sobic001G054200 Sobic010G253800--Sobic001G054200 Sobic010G168600 Sobic010G168600 Sobic002G352700--Sobic010G168600 Sobic002G352700--Sobic010G253800 Sobic002G352700--Sobic001G057800 Sobic002G256300 Sobic002G256300 Sobic002G352700--Sobic002G256300 Sobic003G007500 Sobic003G007500 Sobic002G352700--Sobic003G007500 Sobic004G203100 Sobic004G203100 Sobic002G352700--Sobic004G203100 Sobic002G352700--Sobic010G083700 Sobic009G246950 Sobic009G246950 Sobic002G352700--Sobic009G246950 Sobic008G180900 Sobic008G180900 Sobic002G352700--Sobic008G180900 Sobic010G042100 Sobic010G042100 Sobic003G117900--Sobic010G042100 Sobic003G370900 Sobic003G370900 Sobic003G117900--Sobic003G370900 Sobic001G106700 Sobic001G106700 Sobic003G117900--Sobic001G106700 Sobic003G117900--Sobic001G329100 Sobic003G117900--Sobic001G007200 Sobic003G117900--Sobic004G167400 Sobic003G117900--Sobic004G067100 Sobic002G045300 Sobic002G045300 Sobic003G117900--Sobic002G045300 Sobic003G117900--Sobic010G253800 Sobic001G057800--Sobic001G323000 Sobic001G057800--Sobic002G400000 Sobic001G057800--Sobic002G352700 Sobic001G057800--Sobic002G385900 Sobic001G158500 Sobic001G158500 Sobic001G057800--Sobic001G158500 Sobic001G057800--Sobic004G130900 Sobic001G057800--Sobic010G000900 Sobic001G057800--Sobic010G168600 Sobic009G207000 Sobic009G207000 Sobic001G057800--Sobic009G207000 Sobic003G139800 Sobic003G139800 Sobic010G229400--Sobic003G139800 Sobic006G215700 Sobic006G215700 Sobic010G229400--Sobic006G215700 Sobic009G222500 Sobic009G222500 Sobic010G229400--Sobic009G222500 Sobic010G229400--Sobic008G093000 Sobic010G164000 Sobic010G164000 Sobic010G229400--Sobic010G164000 Sobic010G229400--Sobic002G385900 Sobic010G229400--Sobic010G000900 Sobic010G229400--Sobic002G166900 Sobic010G229400--Sobic001G199100
Octagon: transcription factors


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