Gene annotation
Transcriptome id Sobic.005G150800.1
Synonym Sb05g021470
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
yippee zinc-binding protein, putative, expressed
UniProt C5Y4B9
Pfam PF03226
Panther DB PTHR13848 PTHR13848:SF8
NCBI CDD KOG3399; Predicted Yippee-type zinc-binding protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G27745 : Yippee family putative zinc-binding protein
RAP-DB (Rice) LOC_Os11g35020.2 : yippee zinc-binding protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ88222 , KQJ88220 , KQJ88221
Barley HORVU4Hr1G029200.1 , HORVU7Hr1G001090.3 , HORVU4Hr1G029200.2 , HORVU5Hr1G065980.1 , HORVU4Hr1G029200.10 , HORVU4Hr1G029200.8 , HORVU4Hr1G029200.5 , HORVU4Hr1G029200.4 , HORVU4Hr1G029200.7 , HORVU4Hr1G029200.6 , HORVU7Hr1G001090.1 , HORVU5Hr1G065980.2 , HORVU4Hr1G029200.3 , HORVU7Hr1G001090.2
Wheat TraesCS7A02G013500 , TraesCS7A02G013800 , TraesCS7A02G013800 , TraesCS7A02G010900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G102400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@FYVE zinc finger domain containing protein, expressed -
2 Sobic.001G393800 enoyl-CoA hydratase/isomerase family protein, putative, expressed -
3 Sobic.008G107500 WRKY96, expressed -
4 Sobic.003G009100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxisomal membrane protein, putative, expressed K13348: protein Mpv17
5 Sobic.009G167700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
6 Sobic.001G057800 transmembrane BAX inhibitor motif-containing protein, putative, expressed K06890: uncharacterized protein
7 Sobic.003G354400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyl-coenzyme A oxidase, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
8 Sobic.006G114800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ras-related protein, putative, expressed K07877: Ras-related protein Rab-2A
9 Sobic.004G167400 expressed protein -
10 Sobic.003G338400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase NAK, putative, expressed -
11 Sobic.009G099500 expressed protein -
12 Sobic.002G244100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.006G140000 receptor-like protein kinase precursor, putative, expressed -
14 Sobic.004G042300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.010G016400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxisomal biogenesis factor 11, putative, expressed -
16 Sobic.009G003900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ras-related protein, putative, expressed K07874: Ras-related protein Rab-1A
17 Sobic.010G130200 BPI/LBP family protein At3g20270 precursor, putative, expressed K05399: lipopolysaccharide-binding protein
18 Sobic.006G192700 expressed protein -
19 Sobic.001G010400 snRK1-interacting protein 1, putative, expressed -
20 Sobic.001G158500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@LSD1 zinc finger domain containing protein, expressed -


Gene co-expression network
sample Sobic005G150800 Sobic005G150800 Sobic004G102400 Sobic004G102400 Sobic005G150800--Sobic004G102400 Sobic001G393800 Sobic001G393800 Sobic005G150800--Sobic001G393800 Sobic008G107500 Sobic008G107500 Sobic005G150800--Sobic008G107500 Sobic003G009100 Sobic003G009100 Sobic005G150800--Sobic003G009100 Sobic009G167700 Sobic009G167700 Sobic005G150800--Sobic009G167700 Sobic001G057800 Sobic001G057800 Sobic005G150800--Sobic001G057800 Sobic003G354400 Sobic003G354400 Sobic005G150800--Sobic003G354400 Sobic006G114800 Sobic006G114800 Sobic005G150800--Sobic006G114800 Sobic004G167400 Sobic004G167400 Sobic005G150800--Sobic004G167400 Sobic003G338400 Sobic003G338400 Sobic004G102400--Sobic003G338400 Sobic001G158500 Sobic001G158500 Sobic004G102400--Sobic001G158500 Sobic001G003000 Sobic001G003000 Sobic004G102400--Sobic001G003000 Sobic004G102400--Sobic009G167700 Sobic004G102400--Sobic005G150800 Sobic006G271200 Sobic006G271200 Sobic004G102400--Sobic006G271200 Sobic001G089800 Sobic001G089800 Sobic004G102400--Sobic001G089800 Sobic004G102400--Sobic001G057800 Sobic004G042300 Sobic004G042300 Sobic004G102400--Sobic004G042300 Sobic001G393800--Sobic008G107500 Sobic001G393800--Sobic005G150800 Sobic001G010400 Sobic001G010400 Sobic001G393800--Sobic001G010400 Sobic003G333400 Sobic003G333400 Sobic001G393800--Sobic003G333400 Sobic001G393800--Sobic004G167400 Sobic001G393800--Sobic001G057800 Sobic002G175500 Sobic002G175500 Sobic001G393800--Sobic002G175500 Sobic009G099500 Sobic009G099500 Sobic001G393800--Sobic009G099500 Sobic001G023200 Sobic001G023200 Sobic001G393800--Sobic001G023200 Sobic002G258100 Sobic002G258100 Sobic008G107500--Sobic002G258100 Sobic008G107500--Sobic001G393800 Sobic008G107500--Sobic005G150800 Sobic002G180600 Sobic002G180600 Sobic008G107500--Sobic002G180600 Sobic008G107500--Sobic001G010400 Sobic003G295400 Sobic003G295400 Sobic008G107500--Sobic003G295400 Sobic004G203100 Sobic004G203100 Sobic008G107500--Sobic004G203100 Sobic008G107500--Sobic002G175500 Sobic009G003900 Sobic009G003900 Sobic008G107500--Sobic009G003900 Sobic003G009100--Sobic001G023200 Sobic003G009100--Sobic003G354400 Sobic003G009100--Sobic005G150800 Sobic002G113300 Sobic002G113300 Sobic003G009100--Sobic002G113300 Sobic002G132000 Sobic002G132000 Sobic003G009100--Sobic002G132000 Sobic004G006200 Sobic004G006200 Sobic003G009100--Sobic004G006200 Sobic009G054700 Sobic009G054700 Sobic003G009100--Sobic009G054700 Sobic003G009100--Sobic004G203100 Sobic006G192700 Sobic006G192700 Sobic003G009100--Sobic006G192700 Sobic002G244100 Sobic002G244100 Sobic009G167700--Sobic002G244100 Sobic004G341200 Sobic004G341200 Sobic009G167700--Sobic004G341200 Sobic009G167700--Sobic004G102400 Sobic001G386400 Sobic001G386400 Sobic009G167700--Sobic001G386400 Sobic010G016400 Sobic010G016400 Sobic009G167700--Sobic010G016400 Sobic009G167700--Sobic001G089800 Sobic009G167700--Sobic003G354400 Sobic001G132000 Sobic001G132000 Sobic009G167700--Sobic001G132000 Sobic006G119200 Sobic006G119200 Sobic009G167700--Sobic006G119200 Sobic001G323000 Sobic001G323000 Sobic001G057800--Sobic001G323000 Sobic002G400000 Sobic002G400000 Sobic001G057800--Sobic002G400000 Sobic002G352700 Sobic002G352700 Sobic001G057800--Sobic002G352700 Sobic002G385900 Sobic002G385900 Sobic001G057800--Sobic002G385900 Sobic001G057800--Sobic001G158500 Sobic004G130900 Sobic004G130900 Sobic001G057800--Sobic004G130900 Sobic010G000900 Sobic010G000900 Sobic001G057800--Sobic010G000900 Sobic010G168600 Sobic010G168600 Sobic001G057800--Sobic010G168600 Sobic009G207000 Sobic009G207000 Sobic001G057800--Sobic009G207000 Sobic003G061800 Sobic003G061800 Sobic003G354400--Sobic003G061800 Sobic003G329400 Sobic003G329400 Sobic003G354400--Sobic003G329400 Sobic009G057300 Sobic009G057300 Sobic003G354400--Sobic009G057300 Sobic010G130200 Sobic010G130200 Sobic003G354400--Sobic010G130200 Sobic008G144401 Sobic008G144401 Sobic003G354400--Sobic008G144401 Sobic001G120300 Sobic001G120300 Sobic003G354400--Sobic001G120300 Sobic001G111150 Sobic001G111150 Sobic003G354400--Sobic001G111150 Sobic008G147700 Sobic008G147700 Sobic003G354400--Sobic008G147700 Sobic009G126900 Sobic009G126900 Sobic003G354400--Sobic009G126900 Sobic002G378800 Sobic002G378800 Sobic006G114800--Sobic002G378800 Sobic006G114800--Sobic004G102400 Sobic006G114800--Sobic005G150800 Sobic009G004200 Sobic009G004200 Sobic006G114800--Sobic009G004200 Sobic006G114800--Sobic010G016400 Sobic006G114800--Sobic009G167700 Sobic006G114800--Sobic003G338400 Sobic006G114800--Sobic001G393800 Sobic006G114800--Sobic001G023200 Sobic004G167400--Sobic010G000900 Sobic002G166900 Sobic002G166900 Sobic004G167400--Sobic002G166900 Sobic001G329100 Sobic001G329100 Sobic004G167400--Sobic001G329100 Sobic003G257000 Sobic003G257000 Sobic004G167400--Sobic003G257000 Sobic010G253800 Sobic010G253800 Sobic004G167400--Sobic010G253800 Sobic004G167400--Sobic002G352700 Sobic003G117900 Sobic003G117900 Sobic004G167400--Sobic003G117900 Sobic004G167400--Sobic001G057800 Sobic010G229400 Sobic010G229400 Sobic004G167400--Sobic010G229400
Octagon: transcription factors


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