Gene annotation
Transcriptome id Sobic.010G130200.1
Synonym Sb10g011820
Functional annotation BPI/LBP family protein At3g20270 precursor, putative, expressed
UniProt C5Z1L3
Pfam PF01273 PF02886
Panther DB PTHR10504 PTHR10504:SF73
NCBI CDD KOG4160; BPI/LBP/CETP family protein
KEGG Orthology K05399; lipopolysaccharide-binding protein
Gene Ontology GO:0008289; lipid binding


Orthologs (automatic annotation)
TAIR AT1G04970 : lipid-binding serum glycoprotein family protein
RAP-DB (Rice) LOC_Os06g20430.1 : BPI/LBP family protein At3g20270 precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK18484
Barley HORVU7Hr1G045890.11 , HORVU7Hr1G045890.10 , HORVU7Hr1G045890.13 , HORVU7Hr1G045890.12 , HORVU7Hr1G045890.9 , HORVU7Hr1G045890.8 , HORVU7Hr1G045890.5 , HORVU7Hr1G045890.4 , HORVU7Hr1G045890.7 , HORVU7Hr1G045890.6 , HORVU7Hr1G045890.3 , HORVU7Hr1G045890.2
Wheat TraesCS7A02G223700 , TraesCS7B02G190500 , TraesCS7D02G225400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G083600 expressed protein K10134: etoposide-induced 2.4 mRNA
2 Sobic.001G111150 - K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
3 Sobic.003G305200 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed K01126: E3.1.4.46, glpQ, glycerophosphoryl diester phosphodiesterase
4 Sobic.006G271200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cysteine protease ATG4, putative, expressed K08342: cysteine protease ATG4
5 Sobic.002G270500 UBX domain-containing protein, putative, expressed -
6 Sobic.010G264200 UPF0183 protein, putative, expressed -
7 Sobic.003G354400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyl-coenzyme A oxidase, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
8 Sobic.007G024700 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
9 Sobic.005G203800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@lipase precursor, putative, expressed -
10 Sobic.003G329400 dihydropyrimidinase, putative, expressed K01464: DPYS, dht, dihydropyrimidinase
11 Sobic.004G065000 expressed protein -
12 Sobic.009G133500 expressed protein -
13 Sobic.009G126900 mitochondrial carrier protein, putative, expressed -
14 Sobic.001G436900 autophagy protein 9, putative, expressed K17907: autophagy-related protein 9
15 Sobic.006G237900 UBA/TS-N domain containing protein, expressed -
16 Sobic.010G001500 AML1, putative, expressed -
17 Sobic.001G124200 ethylene receptor, putative, expressed K14509: ETR, ethylene receptor
18 Sobic.003G200100 DUF630/DUF632 domains containing protein, putative, expressed -
19 Sobic.003G317400 Diacylglycerol kinase DGK (Os)(PubMedID : 27208977)@diacylglycerol kinase, putative, expressed K04718: sphingosine kinase
20 Sobic.004G113400 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant


Gene co-expression network
sample Sobic010G130200 Sobic010G130200 Sobic006G083600 Sobic006G083600 Sobic010G130200--Sobic006G083600 Sobic001G111150 Sobic001G111150 Sobic010G130200--Sobic001G111150 Sobic003G305200 Sobic003G305200 Sobic010G130200--Sobic003G305200 Sobic006G271200 Sobic006G271200 Sobic010G130200--Sobic006G271200 Sobic002G270500 Sobic002G270500 Sobic010G130200--Sobic002G270500 Sobic010G264200 Sobic010G264200 Sobic010G130200--Sobic010G264200 Sobic003G354400 Sobic003G354400 Sobic010G130200--Sobic003G354400 Sobic007G024700 Sobic007G024700 Sobic010G130200--Sobic007G024700 Sobic005G203800 Sobic005G203800 Sobic010G130200--Sobic005G203800 Sobic006G083600--Sobic010G130200 Sobic006G083600--Sobic003G305200 Sobic002G189400 Sobic002G189400 Sobic006G083600--Sobic002G189400 Sobic006G083600--Sobic010G264200 Sobic006G083600--Sobic007G024700 Sobic003G155900 Sobic003G155900 Sobic006G083600--Sobic003G155900 Sobic002G262900 Sobic002G262900 Sobic006G083600--Sobic002G262900 Sobic001G124200 Sobic001G124200 Sobic006G083600--Sobic001G124200 Sobic004G113400 Sobic004G113400 Sobic006G083600--Sobic004G113400 Sobic001G111150--Sobic010G130200 Sobic007G068100 Sobic007G068100 Sobic001G111150--Sobic007G068100 Sobic009G057300 Sobic009G057300 Sobic001G111150--Sobic009G057300 Sobic001G111150--Sobic003G354400 Sobic010G001500 Sobic010G001500 Sobic001G111150--Sobic010G001500 Sobic003G388251 Sobic003G388251 Sobic001G111150--Sobic003G388251 Sobic001G474500 Sobic001G474500 Sobic001G111150--Sobic001G474500 Sobic004G127700 Sobic004G127700 Sobic001G111150--Sobic004G127700 Sobic004G124200 Sobic004G124200 Sobic001G111150--Sobic004G124200 Sobic003G305200--Sobic007G024700 Sobic003G305200--Sobic010G130200 Sobic001G427100 Sobic001G427100 Sobic003G305200--Sobic001G427100 Sobic003G305200--Sobic006G083600 Sobic002G132000 Sobic002G132000 Sobic003G305200--Sobic002G132000 Sobic004G295800 Sobic004G295800 Sobic003G305200--Sobic004G295800 Sobic009G094300 Sobic009G094300 Sobic003G305200--Sobic009G094300 Sobic003G305200--Sobic002G270500 Sobic003G329400 Sobic003G329400 Sobic003G305200--Sobic003G329400 Sobic001G003000 Sobic001G003000 Sobic006G271200--Sobic001G003000 Sobic006G237900 Sobic006G237900 Sobic006G271200--Sobic006G237900 Sobic009G126900 Sobic009G126900 Sobic006G271200--Sobic009G126900 Sobic006G271200--Sobic010G130200 Sobic001G089800 Sobic001G089800 Sobic006G271200--Sobic001G089800 Sobic010G043400 Sobic010G043400 Sobic006G271200--Sobic010G043400 Sobic004G351300 Sobic004G351300 Sobic006G271200--Sobic004G351300 Sobic001G436900 Sobic001G436900 Sobic006G271200--Sobic001G436900 Sobic010G072800 Sobic010G072800 Sobic006G271200--Sobic010G072800 Sobic002G270500--Sobic007G024700 Sobic001G207400 Sobic001G207400 Sobic002G270500--Sobic001G207400 Sobic004G355000 Sobic004G355000 Sobic002G270500--Sobic004G355000 Sobic005G157000 Sobic005G157000 Sobic002G270500--Sobic005G157000 Sobic002G430000 Sobic002G430000 Sobic002G270500--Sobic002G430000 Sobic002G270500--Sobic009G126900 Sobic002G270500--Sobic009G094300 Sobic002G270500--Sobic004G113400 Sobic004G269200 Sobic004G269200 Sobic002G270500--Sobic004G269200 Sobic010G264200--Sobic007G024700 Sobic010G264200--Sobic010G130200 Sobic002G382600 Sobic002G382600 Sobic010G264200--Sobic002G382600 Sobic009G249200 Sobic009G249200 Sobic010G264200--Sobic009G249200 Sobic010G264200--Sobic001G124200 Sobic010G020300 Sobic010G020300 Sobic010G264200--Sobic010G020300 Sobic001G466700 Sobic001G466700 Sobic010G264200--Sobic001G466700 Sobic010G264200--Sobic001G436900 Sobic010G264200--Sobic006G083600 Sobic003G061800 Sobic003G061800 Sobic003G354400--Sobic003G061800 Sobic003G354400--Sobic003G329400 Sobic003G354400--Sobic009G057300 Sobic003G354400--Sobic010G130200 Sobic008G144401 Sobic008G144401 Sobic003G354400--Sobic008G144401 Sobic001G120300 Sobic001G120300 Sobic003G354400--Sobic001G120300 Sobic003G354400--Sobic001G111150 Sobic008G147700 Sobic008G147700 Sobic003G354400--Sobic008G147700 Sobic003G354400--Sobic009G126900 Sobic007G024700--Sobic002G270500 Sobic007G024700--Sobic009G094300 Sobic007G024700--Sobic009G249200 Sobic004G052900 Sobic004G052900 Sobic007G024700--Sobic004G052900 Sobic001G270400 Sobic001G270400 Sobic007G024700--Sobic001G270400 Sobic004G264400 Sobic004G264400 Sobic007G024700--Sobic004G264400 Sobic007G024700--Sobic003G305200 Sobic007G024700--Sobic002G132000 Sobic002G419800 Sobic002G419800 Sobic007G024700--Sobic002G419800 Sobic005G203800--Sobic010G130200 Sobic009G133600 Sobic009G133600 Sobic005G203800--Sobic009G133600 Sobic003G436300 Sobic003G436300 Sobic005G203800--Sobic003G436300 Sobic007G007000 Sobic007G007000 Sobic005G203800--Sobic007G007000 Sobic006G034000 Sobic006G034000 Sobic005G203800--Sobic006G034000 Sobic001G121200 Sobic001G121200 Sobic005G203800--Sobic001G121200 Sobic005G203800--Sobic003G354400 Sobic010G205800 Sobic010G205800 Sobic005G203800--Sobic010G205800 Sobic001G390800 Sobic001G390800 Sobic005G203800--Sobic001G390800
Octagon: transcription factors


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