Gene annotation
Transcriptome id Sobic.001G111150.2,Sobic.001G111150.1
Synonym -
Functional annotation -
UniProt A0A1Z5S573 , C5WMY4
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF153
NCBI CDD -
KEGG Orthology K14638; SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT2G02040 : peptide transporter 2
RAP-DB (Rice) LOC_Os03g51050.1 : peptide transporter PTR2, putative, expressed
MaizeGDB (Corn) Zm00025a007920
Brachypodium KQK13492
Barley HORVU4Hr1G008580.3 , HORVU4Hr1G008580.2 , HORVU4Hr1G008580.1 , HORVU4Hr1G008580.6 , HORVU4Hr1G008580.5 , HORVU4Hr1G008580.4
Wheat TraesCS4A02G076200 , TraesCS4D02G052400 , TraesCS4A02G076200 , TraesCS4A02G262700 , TraesCS4D02G233400 , TraesCS4D02G233400 , TraesCS4D02G052400 , TraesCS4A02G076200 , TraesCS4B02G052200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G130200 BPI/LBP family protein At3g20270 precursor, putative, expressed K05399: lipopolysaccharide-binding protein
2 Sobic.007G068100 aconitate hydratase protein, putative, expressed K01681: ACO, aconitate hydratase
3 Sobic.009G057300 acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
4 Sobic.003G354400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyl-coenzyme A oxidase, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
5 Sobic.010G001500 AML1, putative, expressed -
6 Sobic.003G388251 - K01166: ribonuclease T2
7 Sobic.001G474500 mitochondrial carrier protein, putative, expressed -
8 Sobic.004G127700 alpha-1,2-fucosidase, putative, expressed K15923: AXY8, FUC95A, alpha-L-fucosidase 2
9 Sobic.004G124200 3-hydroxyacyl-CoA dehydrogenase, putative, expressed K10527: enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
10 Sobic.002G415900 acyl-CoA dehydrogenase family member 10, putative, expressed K00249: ACADM, acyl-CoA dehydrogenase
11 Sobic.009G133500 expressed protein -
12 Sobic.002G270500 UBX domain-containing protein, putative, expressed -
13 Sobic.008G017800 alpha-N-arabinofuranosidase A, putative, expressed K01209: alpha-L-arabinofuranosidase
14 Sobic.001G334600 OsFBX95 - F-box domain containing protein, expressed -
15 Sobic.006G204900 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
16 Sobic.003G317400 Diacylglycerol kinase DGK (Os)(PubMedID : 27208977)@diacylglycerol kinase, putative, expressed K04718: sphingosine kinase
17 Sobic.007G024700 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
18 Sobic.003G329400 dihydropyrimidinase, putative, expressed K01464: DPYS, dht, dihydropyrimidinase
19 Sobic.003G200100 DUF630/DUF632 domains containing protein, putative, expressed -
20 Sobic.010G205500 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase


Gene co-expression network
sample Sobic001G111150 Sobic001G111150 Sobic010G130200 Sobic010G130200 Sobic001G111150--Sobic010G130200 Sobic007G068100 Sobic007G068100 Sobic001G111150--Sobic007G068100 Sobic009G057300 Sobic009G057300 Sobic001G111150--Sobic009G057300 Sobic003G354400 Sobic003G354400 Sobic001G111150--Sobic003G354400 Sobic010G001500 Sobic010G001500 Sobic001G111150--Sobic010G001500 Sobic003G388251 Sobic003G388251 Sobic001G111150--Sobic003G388251 Sobic001G474500 Sobic001G474500 Sobic001G111150--Sobic001G474500 Sobic004G127700 Sobic004G127700 Sobic001G111150--Sobic004G127700 Sobic004G124200 Sobic004G124200 Sobic001G111150--Sobic004G124200 Sobic006G083600 Sobic006G083600 Sobic010G130200--Sobic006G083600 Sobic010G130200--Sobic001G111150 Sobic003G305200 Sobic003G305200 Sobic010G130200--Sobic003G305200 Sobic006G271200 Sobic006G271200 Sobic010G130200--Sobic006G271200 Sobic002G270500 Sobic002G270500 Sobic010G130200--Sobic002G270500 Sobic010G264200 Sobic010G264200 Sobic010G130200--Sobic010G264200 Sobic010G130200--Sobic003G354400 Sobic007G024700 Sobic007G024700 Sobic010G130200--Sobic007G024700 Sobic005G203800 Sobic005G203800 Sobic010G130200--Sobic005G203800 Sobic001G325200 Sobic001G325200 Sobic007G068100--Sobic001G325200 Sobic007G068100--Sobic001G474500 Sobic007G068100--Sobic003G388251 Sobic003G148800 Sobic003G148800 Sobic007G068100--Sobic003G148800 Sobic007G068100--Sobic009G057300 Sobic004G101900 Sobic004G101900 Sobic007G068100--Sobic004G101900 Sobic003G428400 Sobic003G428400 Sobic007G068100--Sobic003G428400 Sobic009G226300 Sobic009G226300 Sobic007G068100--Sobic009G226300 Sobic004G321800 Sobic004G321800 Sobic007G068100--Sobic004G321800 Sobic003G061800 Sobic003G061800 Sobic009G057300--Sobic003G061800 Sobic009G057300--Sobic001G474500 Sobic009G057300--Sobic007G068100 Sobic009G057300--Sobic001G325200 Sobic009G057300--Sobic003G388251 Sobic003G329400 Sobic003G329400 Sobic009G057300--Sobic003G329400 Sobic009G057300--Sobic003G354400 Sobic001G334600 Sobic001G334600 Sobic009G057300--Sobic001G334600 Sobic001G322700 Sobic001G322700 Sobic009G057300--Sobic001G322700 Sobic003G354400--Sobic003G061800 Sobic003G354400--Sobic003G329400 Sobic003G354400--Sobic009G057300 Sobic003G354400--Sobic010G130200 Sobic008G144401 Sobic008G144401 Sobic003G354400--Sobic008G144401 Sobic001G120300 Sobic001G120300 Sobic003G354400--Sobic001G120300 Sobic003G354400--Sobic001G111150 Sobic008G147700 Sobic008G147700 Sobic003G354400--Sobic008G147700 Sobic009G126900 Sobic009G126900 Sobic003G354400--Sobic009G126900 Sobic003G322700 Sobic003G322700 Sobic010G001500--Sobic003G322700 Sobic010G001500--Sobic007G024700 Sobic004G355000 Sobic004G355000 Sobic010G001500--Sobic004G355000 Sobic006G204900 Sobic006G204900 Sobic010G001500--Sobic006G204900 Sobic010G224000 Sobic010G224000 Sobic010G001500--Sobic010G224000 Sobic002G419800 Sobic002G419800 Sobic010G001500--Sobic002G419800 Sobic001G207400 Sobic001G207400 Sobic010G001500--Sobic001G207400 Sobic001G178700 Sobic001G178700 Sobic010G001500--Sobic001G178700 Sobic001G146800 Sobic001G146800 Sobic010G001500--Sobic001G146800 Sobic003G388251--Sobic004G124200 Sobic003G388251--Sobic007G068100 Sobic003G388251--Sobic001G325200 Sobic003G388251--Sobic001G474500 Sobic003G388251--Sobic004G101900 Sobic005G178100 Sobic005G178100 Sobic003G388251--Sobic005G178100 Sobic009G034700 Sobic009G034700 Sobic003G388251--Sobic009G034700 Sobic003G388251--Sobic009G057300 Sobic001G015500 Sobic001G015500 Sobic003G388251--Sobic001G015500 Sobic001G474500--Sobic007G068100 Sobic001G474500--Sobic001G325200 Sobic001G474500--Sobic009G057300 Sobic004G060900 Sobic004G060900 Sobic001G474500--Sobic004G060900 Sobic001G474500--Sobic003G388251 Sobic001G474500--Sobic004G321800 Sobic001G474500--Sobic003G428400 Sobic001G130000 Sobic001G130000 Sobic001G474500--Sobic001G130000 Sobic001G474500--Sobic009G034700 Sobic003G233600 Sobic003G233600 Sobic004G127700--Sobic003G233600 Sobic009G094300 Sobic009G094300 Sobic004G127700--Sobic009G094300 Sobic002G308500 Sobic002G308500 Sobic004G127700--Sobic002G308500 Sobic004G339100 Sobic004G339100 Sobic004G127700--Sobic004G339100 Sobic004G127700--Sobic001G120300 Sobic004G127700--Sobic001G111150 Sobic009G139900 Sobic009G139900 Sobic004G127700--Sobic009G139900 Sobic004G127700--Sobic009G057300 Sobic004G136300 Sobic004G136300 Sobic004G127700--Sobic004G136300 Sobic004G124200--Sobic003G388251 Sobic004G124200--Sobic004G101900 Sobic004G124200--Sobic001G325200 Sobic004G124200--Sobic001G015500 Sobic009G161000 Sobic009G161000 Sobic004G124200--Sobic009G161000 Sobic010G043400 Sobic010G043400 Sobic004G124200--Sobic010G043400 Sobic006G199000 Sobic006G199000 Sobic004G124200--Sobic006G199000 Sobic004G124200--Sobic007G068100 Sobic004G124200--Sobic005G178100
Octagon: transcription factors


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