Gene annotation
Transcriptome id Sobic.002G415900.1
Synonym Sb02g042770, IBR3
Functional annotation acyl-CoA dehydrogenase family member 10, putative, expressed
UniProt A0A1W0W7X0
Pfam PF08028 PF02771 PF02770 PF01636
Panther DB PTHR10909 PTHR10909:SF282
NCBI CDD -
KEGG Orthology K00249; ACADM, acyl-CoA dehydrogenase
Gene Ontology GO:0016627; oxidoreductase activity, acting on the CH-CH group of donors GO:0008152metabolic process GO:0003995acyl-CoA dehydrogenase activity


Orthologs (automatic annotation)
TAIR AT3G06810 : acyl-CoA dehydrogenase-related
RAP-DB (Rice) LOC_Os07g47820.1 : acyl-CoA dehydrogenase family member 10, putative, expressed
MaizeGDB (Corn) Zm00025a015425
Brachypodium KQK14668 , KQK14669
Barley HORVU2Hr1G018720.1 , HORVU2Hr1G018720.2 , HORVU2Hr1G018720.3 , HORVU2Hr1G018720.4 , HORVU2Hr1G018720.5 , HORVU2Hr1G018720.6 , HORVU2Hr1G018720.7 , HORVU2Hr1G018720.8
Wheat TraesCS2A02G109700 , TraesCS2D02G109900 , TraesCS2D02G109900 , TraesCS2B02G127700
Populus PNS23870 , PNS23869 , PNT26069


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cDNA sequences
Sobic.002G415900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G068100 aconitate hydratase protein, putative, expressed K01681: ACO, aconitate hydratase
2 Sobic.001G474500 mitochondrial carrier protein, putative, expressed -
3 Sobic.009G057300 acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
4 Sobic.003G388251 - K01166: ribonuclease T2
5 Sobic.001G111150 - K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
6 Sobic.001G322700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@5-oxoprolinase, putative, expressed K01469: OPLAH, OXP1, 5-oxoprolinase (ATP-hydrolysing)
7 Sobic.003G200100 DUF630/DUF632 domains containing protein, putative, expressed -
8 Sobic.003G226200 neutral ceramidase precursor, putative, expressed K12349: neutral ceramidase
9 Sobic.004G124200 3-hydroxyacyl-CoA dehydrogenase, putative, expressed K10527: enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
10 Sobic.004G127700 alpha-1,2-fucosidase, putative, expressed K15923: AXY8, FUC95A, alpha-L-fucosidase 2
11 Sobic.003G354400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyl-coenzyme A oxidase, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
12 Sobic.010G205500 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
13 Sobic.001G265600 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
14 Sobic.004G345800 Peroxisomal 3-ketoacyl-CoA thiolase 3 PKT3 (At)(PubMedID : 27208977)@3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed K07513: acetyl-CoA acyltransferase 1
15 Sobic.001G325200 Expressed in drought and oxidative stress(PubMedID : 29862293)@aldehyde oxidase, putative, expressed K00106: xanthine dehydrogenase/oxidase
16 Sobic.002G315800 Papain family cysteine protease domain containing protein, expressed K01363: cathepsin B
17 Sobic.003G241500 dehydrogenase, putative, expressed K00031: IDH1, IDH2, isocitrate dehydrogenase
18 Sobic.004G101900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@citrate synthase, putative, expressed K01647: CS, citrate synthase
19 Sobic.003G428400 beta-galactosidase, putative, expressed K01190: beta-galactosidase
20 Sobic.003G329400 dihydropyrimidinase, putative, expressed K01464: DPYS, dht, dihydropyrimidinase


Gene co-expression network
sample Sobic002G415900 Sobic002G415900 Sobic007G068100 Sobic007G068100 Sobic002G415900--Sobic007G068100 Sobic001G474500 Sobic001G474500 Sobic002G415900--Sobic001G474500 Sobic009G057300 Sobic009G057300 Sobic002G415900--Sobic009G057300 Sobic003G388251 Sobic003G388251 Sobic002G415900--Sobic003G388251 Sobic001G111150 Sobic001G111150 Sobic002G415900--Sobic001G111150 Sobic001G322700 Sobic001G322700 Sobic002G415900--Sobic001G322700 Sobic003G200100 Sobic003G200100 Sobic002G415900--Sobic003G200100 Sobic003G226200 Sobic003G226200 Sobic002G415900--Sobic003G226200 Sobic004G124200 Sobic004G124200 Sobic002G415900--Sobic004G124200 Sobic001G325200 Sobic001G325200 Sobic007G068100--Sobic001G325200 Sobic007G068100--Sobic001G474500 Sobic007G068100--Sobic003G388251 Sobic003G148800 Sobic003G148800 Sobic007G068100--Sobic003G148800 Sobic007G068100--Sobic009G057300 Sobic004G101900 Sobic004G101900 Sobic007G068100--Sobic004G101900 Sobic003G428400 Sobic003G428400 Sobic007G068100--Sobic003G428400 Sobic009G226300 Sobic009G226300 Sobic007G068100--Sobic009G226300 Sobic004G321800 Sobic004G321800 Sobic007G068100--Sobic004G321800 Sobic001G474500--Sobic007G068100 Sobic001G474500--Sobic001G325200 Sobic001G474500--Sobic009G057300 Sobic004G060900 Sobic004G060900 Sobic001G474500--Sobic004G060900 Sobic001G474500--Sobic003G388251 Sobic001G474500--Sobic004G321800 Sobic001G474500--Sobic003G428400 Sobic001G130000 Sobic001G130000 Sobic001G474500--Sobic001G130000 Sobic009G034700 Sobic009G034700 Sobic001G474500--Sobic009G034700 Sobic003G061800 Sobic003G061800 Sobic009G057300--Sobic003G061800 Sobic009G057300--Sobic001G474500 Sobic009G057300--Sobic007G068100 Sobic009G057300--Sobic001G325200 Sobic009G057300--Sobic003G388251 Sobic003G329400 Sobic003G329400 Sobic009G057300--Sobic003G329400 Sobic003G354400 Sobic003G354400 Sobic009G057300--Sobic003G354400 Sobic001G334600 Sobic001G334600 Sobic009G057300--Sobic001G334600 Sobic009G057300--Sobic001G322700 Sobic003G388251--Sobic004G124200 Sobic003G388251--Sobic007G068100 Sobic003G388251--Sobic001G325200 Sobic003G388251--Sobic001G474500 Sobic003G388251--Sobic004G101900 Sobic005G178100 Sobic005G178100 Sobic003G388251--Sobic005G178100 Sobic003G388251--Sobic009G034700 Sobic003G388251--Sobic009G057300 Sobic001G015500 Sobic001G015500 Sobic003G388251--Sobic001G015500 Sobic010G130200 Sobic010G130200 Sobic001G111150--Sobic010G130200 Sobic001G111150--Sobic007G068100 Sobic001G111150--Sobic009G057300 Sobic001G111150--Sobic003G354400 Sobic010G001500 Sobic010G001500 Sobic001G111150--Sobic010G001500 Sobic001G111150--Sobic003G388251 Sobic001G111150--Sobic001G474500 Sobic004G127700 Sobic004G127700 Sobic001G111150--Sobic004G127700 Sobic001G111150--Sobic004G124200 Sobic001G322700--Sobic003G329400 Sobic001G322700--Sobic001G325200 Sobic001G322700--Sobic007G068100 Sobic001G322700--Sobic009G057300 Sobic001G322700--Sobic004G101900 Sobic010G107000 Sobic010G107000 Sobic001G322700--Sobic010G107000 Sobic003G149200 Sobic003G149200 Sobic001G322700--Sobic003G149200 Sobic001G322700--Sobic001G015500 Sobic002G304000 Sobic002G304000 Sobic001G322700--Sobic002G304000 Sobic004G065000 Sobic004G065000 Sobic003G200100--Sobic004G065000 Sobic003G200100--Sobic010G001500 Sobic004G265800 Sobic004G265800 Sobic003G200100--Sobic004G265800 Sobic009G133500 Sobic009G133500 Sobic003G200100--Sobic009G133500 Sobic003G200100--Sobic001G111150 Sobic003G200100--Sobic010G130200 Sobic006G204900 Sobic006G204900 Sobic003G200100--Sobic006G204900 Sobic003G200100--Sobic002G415900 Sobic001G436900 Sobic001G436900 Sobic003G200100--Sobic001G436900 Sobic009G234800 Sobic009G234800 Sobic003G226200--Sobic009G234800 Sobic002G058500 Sobic002G058500 Sobic003G226200--Sobic002G058500 Sobic005G079900 Sobic005G079900 Sobic003G226200--Sobic005G079900 Sobic007G041400 Sobic007G041400 Sobic003G226200--Sobic007G041400 Sobic001G265600 Sobic001G265600 Sobic003G226200--Sobic001G265600 Sobic003G226200--Sobic002G415900 Sobic003G226200--Sobic007G068100 Sobic002G215700 Sobic002G215700 Sobic003G226200--Sobic002G215700 Sobic003G226200--Sobic004G101900 Sobic004G124200--Sobic003G388251 Sobic004G124200--Sobic004G101900 Sobic004G124200--Sobic001G325200 Sobic004G124200--Sobic001G015500 Sobic009G161000 Sobic009G161000 Sobic004G124200--Sobic009G161000 Sobic010G043400 Sobic010G043400 Sobic004G124200--Sobic010G043400 Sobic006G199000 Sobic006G199000 Sobic004G124200--Sobic006G199000 Sobic004G124200--Sobic007G068100 Sobic004G124200--Sobic005G178100
Octagon: transcription factors


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