Gene annotation
Transcriptome id Sobic.003G200100.1
Synonym Sb03g026230
Functional annotation DUF630/DUF632 domains containing protein, putative, expressed
UniProt C5XPF2
Pfam PF04783 PF04782
Panther DB PTHR21450 PTHR21450:SF21
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G34670 : Protein of unknown function (DUF630 and DUF632)
RAP-DB (Rice) LOC_Os01g40330.1 : DUF630/DUF632 domains containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a028518 , Zm00025a038409
Brachypodium KQK08470
Barley HORVU3Hr1G050880.1 , HORVU3Hr1G050880.2 , HORVU3Hr1G050880.3
Wheat TraesCS3B02G240800 , TraesCS3A02G210200 , TraesCS3A02G210200 , TraesCS3D02G213000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G065000 expressed protein -
2 Sobic.010G001500 AML1, putative, expressed -
3 Sobic.004G265800 uridine kinase, putative, expressed -
4 Sobic.009G133500 expressed protein -
5 Sobic.001G111150 - K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
6 Sobic.010G130200 BPI/LBP family protein At3g20270 precursor, putative, expressed K05399: lipopolysaccharide-binding protein
7 Sobic.006G204900 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
8 Sobic.002G415900 acyl-CoA dehydrogenase family member 10, putative, expressed K00249: ACADM, acyl-CoA dehydrogenase
9 Sobic.001G436900 autophagy protein 9, putative, expressed K17907: autophagy-related protein 9
10 Sobic.007G088100 phosphatidylinositol 3-kinase, root isoform, putative, expressed K00914: PIK3C3, phosphatidylinositol 3-kinase
11 Sobic.004G266400 monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
12 Sobic.006G043600 cysteine proteinase 1 precursor, putative, expressed K01373: cathepsin F
13 Sobic.002G230500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.003G100800 acetyl-CoA acetyltransferase, cytosolic, putative, expressed K00626: ACAT, acetyl-CoA C-acetyltransferase
15 Sobic.006G240700 AP2 domain containing protein, expressed K09284: AP2-like factor, euAP2 lineage
16 Sobic.006G083600 expressed protein K10134: etoposide-induced 2.4 mRNA
17 Sobic.010G224000 molybdenum cofactor sulfurase, putative, expressed K15631: molybdenum cofactor sulfurtransferase
18 Sobic.001G146800 expressed protein -
19 Sobic.004G131040 - K03544: clpX, ATP-dependent Clp protease ATP-binding subunit ClpX
20 Sobic.007G068100 aconitate hydratase protein, putative, expressed K01681: ACO, aconitate hydratase


Gene co-expression network
sample Sobic003G200100 Sobic003G200100 Sobic004G065000 Sobic004G065000 Sobic003G200100--Sobic004G065000 Sobic010G001500 Sobic010G001500 Sobic003G200100--Sobic010G001500 Sobic004G265800 Sobic004G265800 Sobic003G200100--Sobic004G265800 Sobic009G133500 Sobic009G133500 Sobic003G200100--Sobic009G133500 Sobic001G111150 Sobic001G111150 Sobic003G200100--Sobic001G111150 Sobic010G130200 Sobic010G130200 Sobic003G200100--Sobic010G130200 Sobic006G204900 Sobic006G204900 Sobic003G200100--Sobic006G204900 Sobic002G415900 Sobic002G415900 Sobic003G200100--Sobic002G415900 Sobic001G436900 Sobic001G436900 Sobic003G200100--Sobic001G436900 Sobic007G075400 Sobic007G075400 Sobic004G065000--Sobic007G075400 Sobic004G331100 Sobic004G331100 Sobic004G065000--Sobic004G331100 Sobic004G065000--Sobic009G133500 Sobic007G163100 Sobic007G163100 Sobic004G065000--Sobic007G163100 Sobic007G133700 Sobic007G133700 Sobic004G065000--Sobic007G133700 Sobic010G139600 Sobic010G139600 Sobic004G065000--Sobic010G139600 Sobic001G313700 Sobic001G313700 Sobic004G065000--Sobic001G313700 Sobic001G273700 Sobic001G273700 Sobic004G065000--Sobic001G273700 Sobic001G085300 Sobic001G085300 Sobic004G065000--Sobic001G085300 Sobic003G322700 Sobic003G322700 Sobic010G001500--Sobic003G322700 Sobic007G024700 Sobic007G024700 Sobic010G001500--Sobic007G024700 Sobic004G355000 Sobic004G355000 Sobic010G001500--Sobic004G355000 Sobic010G001500--Sobic006G204900 Sobic010G224000 Sobic010G224000 Sobic010G001500--Sobic010G224000 Sobic002G419800 Sobic002G419800 Sobic010G001500--Sobic002G419800 Sobic001G207400 Sobic001G207400 Sobic010G001500--Sobic001G207400 Sobic001G178700 Sobic001G178700 Sobic010G001500--Sobic001G178700 Sobic001G146800 Sobic001G146800 Sobic010G001500--Sobic001G146800 Sobic004G131040 Sobic004G131040 Sobic004G265800--Sobic004G131040 Sobic001G462500 Sobic001G462500 Sobic004G265800--Sobic001G462500 Sobic007G004500 Sobic007G004500 Sobic004G265800--Sobic007G004500 Sobic004G265800--Sobic003G200100 Sobic004G265800--Sobic004G065000 Sobic001G351800 Sobic001G351800 Sobic004G265800--Sobic001G351800 Sobic004G265800--Sobic003G322700 Sobic004G265800--Sobic006G204900 Sobic002G266000 Sobic002G266000 Sobic004G265800--Sobic002G266000 Sobic009G133500--Sobic004G065000 Sobic009G133500--Sobic006G204900 Sobic009G133500--Sobic010G139600 Sobic002G147600 Sobic002G147600 Sobic009G133500--Sobic002G147600 Sobic004G136300 Sobic004G136300 Sobic009G133500--Sobic004G136300 Sobic008G092600 Sobic008G092600 Sobic009G133500--Sobic008G092600 Sobic004G329400 Sobic004G329400 Sobic009G133500--Sobic004G329400 Sobic009G133500--Sobic007G004500 Sobic009G133500--Sobic007G075400 Sobic001G111150--Sobic010G130200 Sobic007G068100 Sobic007G068100 Sobic001G111150--Sobic007G068100 Sobic009G057300 Sobic009G057300 Sobic001G111150--Sobic009G057300 Sobic003G354400 Sobic003G354400 Sobic001G111150--Sobic003G354400 Sobic001G111150--Sobic010G001500 Sobic003G388251 Sobic003G388251 Sobic001G111150--Sobic003G388251 Sobic001G474500 Sobic001G474500 Sobic001G111150--Sobic001G474500 Sobic004G127700 Sobic004G127700 Sobic001G111150--Sobic004G127700 Sobic004G124200 Sobic004G124200 Sobic001G111150--Sobic004G124200 Sobic006G083600 Sobic006G083600 Sobic010G130200--Sobic006G083600 Sobic010G130200--Sobic001G111150 Sobic003G305200 Sobic003G305200 Sobic010G130200--Sobic003G305200 Sobic006G271200 Sobic006G271200 Sobic010G130200--Sobic006G271200 Sobic002G270500 Sobic002G270500 Sobic010G130200--Sobic002G270500 Sobic010G264200 Sobic010G264200 Sobic010G130200--Sobic010G264200 Sobic010G130200--Sobic003G354400 Sobic010G130200--Sobic007G024700 Sobic005G203800 Sobic005G203800 Sobic010G130200--Sobic005G203800 Sobic006G204900--Sobic003G322700 Sobic006G204900--Sobic001G207400 Sobic004G269200 Sobic004G269200 Sobic006G204900--Sobic004G269200 Sobic006G204900--Sobic009G133500 Sobic006G204900--Sobic010G001500 Sobic004G068400 Sobic004G068400 Sobic006G204900--Sobic004G068400 Sobic006G204900--Sobic004G355000 Sobic003G320700 Sobic003G320700 Sobic006G204900--Sobic003G320700 Sobic002G430000 Sobic002G430000 Sobic006G204900--Sobic002G430000 Sobic002G415900--Sobic007G068100 Sobic002G415900--Sobic001G474500 Sobic002G415900--Sobic009G057300 Sobic002G415900--Sobic003G388251 Sobic002G415900--Sobic001G111150 Sobic001G322700 Sobic001G322700 Sobic002G415900--Sobic001G322700 Sobic002G415900--Sobic003G200100 Sobic003G226200 Sobic003G226200 Sobic002G415900--Sobic003G226200 Sobic002G415900--Sobic004G124200 Sobic001G436900--Sobic004G331100 Sobic001G436900--Sobic003G320700 Sobic001G436900--Sobic004G065000 Sobic001G436900--Sobic006G271200 Sobic001G436900--Sobic006G204900 Sobic001G436900--Sobic007G075400 Sobic009G113000 Sobic009G113000 Sobic001G436900--Sobic009G113000 Sobic002G382600 Sobic002G382600 Sobic001G436900--Sobic002G382600 Sobic001G436900--Sobic010G264200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.