Gene annotation
Transcriptome id Sobic.004G265800.1
Synonym Sb04g030380
Functional annotation uridine kinase, putative, expressed
UniProt C5Y0A1
Pfam PF01928 PF00485
Panther DB PTHR10285 PTHR10285:SF76
NCBI CDD KOG4203; Armadillo/beta-Catenin/plakoglobin
KEGG Orthology -
Gene Ontology GO:0016301; kinase activity GO:0008152metabolic process GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT1G26190 : Phosphoribulokinase / Uridine kinase family
RAP-DB (Rice) LOC_Os02g47860.1 : uridine kinase, putative, expressed
MaizeGDB (Corn) Zm00025a021745
Brachypodium KQK00959 , KQJ92235 , PNT69291
Barley HORVU6Hr1G069280.5 , HORVU6Hr1G069280.4 , HORVU6Hr1G069280.3 , HORVU6Hr1G069280.2 , HORVU6Hr1G069280.1 , HORVU6Hr1G069280.7 , HORVU6Hr1G069280.6 , HORVU6Hr1G069280.8 , HORVU6Hr1G069280.13 , HORVU6Hr1G069280.12 , HORVU6Hr1G069280.11 , HORVU6Hr1G069280.10 , HORVU6Hr1G069280.9
Wheat TraesCS6A02G274300 , TraesCS6A02G274300 , TraesCS6B02G301800 , TraesCS6D02G254500
Populus PNT16342 , PNT23993 , PNT23992 , PNT23991


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cDNA sequences
Sobic.004G265800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G131040 - K03544: clpX, ATP-dependent Clp protease ATP-binding subunit ClpX
2 Sobic.001G462500 natural resistance-associated macrophage protein, putative, expressed K12347: SLC11A1, natural resistance-associated macrophage protein 1
3 Sobic.007G004500 phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
4 Sobic.003G200100 DUF630/DUF632 domains containing protein, putative, expressed -
5 Sobic.004G065000 expressed protein -
6 Sobic.001G351800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@integral membrane protein, putative, expressed -
7 Sobic.003G322700 expressed protein -
8 Sobic.006G204900 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
9 Sobic.002G266000 ankyrin repeat-containing protein, putative, expressed -
10 Sobic.001G436900 autophagy protein 9, putative, expressed K17907: autophagy-related protein 9
11 Sobic.004G124200 3-hydroxyacyl-CoA dehydrogenase, putative, expressed K10527: enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
12 Sobic.010G001500 AML1, putative, expressed -
13 Sobic.009G133500 expressed protein -
14 Sobic.002G249200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin efflux carrier component, putative, expressed -
15 Sobic.004G329300 leucine aminopeptidase, chloroplast precursor, putative, expressed K01255: CARP, leucyl aminopeptidase
16 Sobic.003G320700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.001G016700 ion channel DMI1-like, chloroplast precursor, putative, expressed -
18 Sobic.001G146800 expressed protein -
19 Sobic.005G059600 WD domain, G-beta repeat domain containing protein, expressed -
20 Sobic.010G203200 protein kinase domain containing protein, expressed -


Gene co-expression network
sample Sobic004G265800 Sobic004G265800 Sobic004G131040 Sobic004G131040 Sobic004G265800--Sobic004G131040 Sobic001G462500 Sobic001G462500 Sobic004G265800--Sobic001G462500 Sobic007G004500 Sobic007G004500 Sobic004G265800--Sobic007G004500 Sobic003G200100 Sobic003G200100 Sobic004G265800--Sobic003G200100 Sobic004G065000 Sobic004G065000 Sobic004G265800--Sobic004G065000 Sobic001G351800 Sobic001G351800 Sobic004G265800--Sobic001G351800 Sobic003G322700 Sobic003G322700 Sobic004G265800--Sobic003G322700 Sobic006G204900 Sobic006G204900 Sobic004G265800--Sobic006G204900 Sobic002G266000 Sobic002G266000 Sobic004G265800--Sobic002G266000 Sobic010G000600 Sobic010G000600 Sobic004G131040--Sobic010G000600 Sobic004G131040--Sobic004G265800 Sobic002G181300 Sobic002G181300 Sobic004G131040--Sobic002G181300 Sobic001G146800 Sobic001G146800 Sobic004G131040--Sobic001G146800 Sobic002G315800 Sobic002G315800 Sobic004G131040--Sobic002G315800 Sobic006G030600 Sobic006G030600 Sobic004G131040--Sobic006G030600 Sobic004G131040--Sobic007G004500 Sobic002G193100 Sobic002G193100 Sobic004G131040--Sobic002G193100 Sobic003G110000 Sobic003G110000 Sobic004G131040--Sobic003G110000 Sobic001G462500--Sobic002G266000 Sobic001G462500--Sobic006G204900 Sobic001G462500--Sobic003G322700 Sobic001G462500--Sobic004G265800 Sobic001G016700 Sobic001G016700 Sobic001G462500--Sobic001G016700 Sobic001G462500--Sobic007G004500 Sobic004G266400 Sobic004G266400 Sobic001G462500--Sobic004G266400 Sobic006G087700 Sobic006G087700 Sobic001G462500--Sobic006G087700 Sobic001G207400 Sobic001G207400 Sobic001G462500--Sobic001G207400 Sobic007G004500--Sobic002G266000 Sobic002G430000 Sobic002G430000 Sobic007G004500--Sobic002G430000 Sobic001G085300 Sobic001G085300 Sobic007G004500--Sobic001G085300 Sobic001G390800 Sobic001G390800 Sobic007G004500--Sobic001G390800 Sobic007G004500--Sobic001G016700 Sobic007G004500--Sobic003G322700 Sobic010G139600 Sobic010G139600 Sobic007G004500--Sobic010G139600 Sobic007G004500--Sobic004G065000 Sobic009G133500 Sobic009G133500 Sobic007G004500--Sobic009G133500 Sobic003G200100--Sobic004G065000 Sobic010G001500 Sobic010G001500 Sobic003G200100--Sobic010G001500 Sobic003G200100--Sobic004G265800 Sobic003G200100--Sobic009G133500 Sobic001G111150 Sobic001G111150 Sobic003G200100--Sobic001G111150 Sobic010G130200 Sobic010G130200 Sobic003G200100--Sobic010G130200 Sobic003G200100--Sobic006G204900 Sobic002G415900 Sobic002G415900 Sobic003G200100--Sobic002G415900 Sobic001G436900 Sobic001G436900 Sobic003G200100--Sobic001G436900 Sobic007G075400 Sobic007G075400 Sobic004G065000--Sobic007G075400 Sobic004G331100 Sobic004G331100 Sobic004G065000--Sobic004G331100 Sobic004G065000--Sobic009G133500 Sobic007G163100 Sobic007G163100 Sobic004G065000--Sobic007G163100 Sobic007G133700 Sobic007G133700 Sobic004G065000--Sobic007G133700 Sobic004G065000--Sobic010G139600 Sobic001G313700 Sobic001G313700 Sobic004G065000--Sobic001G313700 Sobic001G273700 Sobic001G273700 Sobic004G065000--Sobic001G273700 Sobic004G065000--Sobic001G085300 Sobic004G034600 Sobic004G034600 Sobic001G351800--Sobic004G034600 Sobic001G351800--Sobic003G322700 Sobic001G351800--Sobic002G266000 Sobic003G010600 Sobic003G010600 Sobic001G351800--Sobic003G010600 Sobic004G124200 Sobic004G124200 Sobic001G351800--Sobic004G124200 Sobic009G034700 Sobic009G034700 Sobic001G351800--Sobic009G034700 Sobic010G192800 Sobic010G192800 Sobic001G351800--Sobic010G192800 Sobic004G225200 Sobic004G225200 Sobic001G351800--Sobic004G225200 Sobic001G282600 Sobic001G282600 Sobic001G351800--Sobic001G282600 Sobic003G322700--Sobic002G266000 Sobic003G322700--Sobic006G204900 Sobic003G322700--Sobic010G001500 Sobic004G355000 Sobic004G355000 Sobic003G322700--Sobic004G355000 Sobic003G322700--Sobic001G207400 Sobic003G355600 Sobic003G355600 Sobic003G322700--Sobic003G355600 Sobic003G322700--Sobic006G087700 Sobic006G199000 Sobic006G199000 Sobic003G322700--Sobic006G199000 Sobic003G322700--Sobic004G034600 Sobic006G204900--Sobic003G322700 Sobic006G204900--Sobic001G207400 Sobic004G269200 Sobic004G269200 Sobic006G204900--Sobic004G269200 Sobic006G204900--Sobic009G133500 Sobic006G204900--Sobic010G001500 Sobic004G068400 Sobic004G068400 Sobic006G204900--Sobic004G068400 Sobic006G204900--Sobic004G355000 Sobic003G320700 Sobic003G320700 Sobic006G204900--Sobic003G320700 Sobic006G204900--Sobic002G430000 Sobic002G266000--Sobic003G322700 Sobic002G266000--Sobic001G282600 Sobic006G104600 Sobic006G104600 Sobic002G266000--Sobic006G104600 Sobic002G249200 Sobic002G249200 Sobic002G266000--Sobic002G249200 Sobic004G261900 Sobic004G261900 Sobic002G266000--Sobic004G261900 Sobic002G266000--Sobic007G004500 Sobic002G266000--Sobic004G034600 Sobic005G149700 Sobic005G149700 Sobic002G266000--Sobic005G149700 Sobic002G266000--Sobic004G225200
Octagon: transcription factors


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