Gene annotation
Transcriptome id Sobic.002G249200.1,Sobic.002G249200.8,Sobic.002G249200.6,Sobic.002G249200.4,Sobic.002G249200.5,Sobic.002G249200.7
Synonym Sb02g028510
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
auxin efflux carrier component, putative, expressed
UniProt C5X4G7 , A0A1W0W5S9
Pfam PF03547
Panther DB PTHR31651 PTHR31651:SF5
NCBI CDD KOG2722; Predicted membrane protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G20925 : Auxin efflux carrier family protein
RAP-DB (Rice) LOC_Os09g31478.1 : auxin efflux carrier component, putative, expressed
MaizeGDB (Corn) Zm00025a047462
Brachypodium KQJ90777 , KQJ90776 , KQJ90741
Barley HORVU5Hr1G073670.4 , HORVU5Hr1G073670.5 , HORVU5Hr1G073670.2 , HORVU5Hr1G073670.3 , HORVU5Hr1G073670.1 , HORVU5Hr1G073630.2 , HORVU5Hr1G073630.3 , HORVU5Hr1G073630.1 , HORVU5Hr1G073630.4 , HORVU5Hr1G073630.5
Wheat TraesCS5D02G275200 , TraesCS5B02G267800 , TraesCS5B02G267800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G266000 ankyrin repeat-containing protein, putative, expressed -
2 Sobic.001G282600 transporter family protein, putative, expressed -
3 Sobic.009G161000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
4 Sobic.002G274800 "senescence-inducible chloroplast stay-green protein, GenBank annotation:AY850140"(PubMedID : 17513504)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@senescence-inducible chloroplast stay-green protein 1, putative, expressed -
5 Sobic.001G504900 pheophorbide a oxygenase, chloroplast precursor, putative, expressed K13071: PAO, pheophorbide a oxygenase
6 Sobic.005G178100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@F-box/Kelch-repeat protein, putative, expressed -
7 Sobic.010G203200 protein kinase domain containing protein, expressed -
8 Sobic.007G225900 OsWAK13 - OsWAK receptor-like protein kinase, expressed -
9 Sobic.004G124200 3-hydroxyacyl-CoA dehydrogenase, putative, expressed K10527: enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
10 Sobic.009G207600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dnaJ domain containing protein, expressed -
11 Sobic.009G034700 aspartic proteinase oryzasin-1 precursor, putative, expressed K08245: phytepsin
12 Sobic.001G462500 natural resistance-associated macrophage protein, putative, expressed K12347: SLC11A1, natural resistance-associated macrophage protein 1
13 Sobic.008G079300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
14 Sobic.001G301700 MYB family transcription factor, putative, expressed K09522: DnaJ homolog subfamily C member 2
15 Sobic.001G351800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@integral membrane protein, putative, expressed -
16 Sobic.004G261900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@diacylglycerol O-acyltransferase, putative, expressed K14457: MOGAT2, 2-acylglycerol O-acyltransferase 2
17 Sobic.004G225200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein nitrilase 4 NIT4 (Os)(PubMedID : 27208977)@nitrilase, putative, expressed K13035: beta-cyano-L-alanine hydratase/nitrilase
18 Sobic.003G322700 expressed protein -
19 Sobic.006G028900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
20 Sobic.004G034600 hydrolase, alpha/beta fold family domain containing protein, expressed -


Gene co-expression network
sample Sobic002G249200 Sobic002G249200 Sobic002G266000 Sobic002G266000 Sobic002G249200--Sobic002G266000 Sobic001G282600 Sobic001G282600 Sobic002G249200--Sobic001G282600 Sobic009G161000 Sobic009G161000 Sobic002G249200--Sobic009G161000 Sobic002G274800 Sobic002G274800 Sobic002G249200--Sobic002G274800 Sobic001G504900 Sobic001G504900 Sobic002G249200--Sobic001G504900 Sobic005G178100 Sobic005G178100 Sobic002G249200--Sobic005G178100 Sobic010G203200 Sobic010G203200 Sobic002G249200--Sobic010G203200 Sobic007G225900 Sobic007G225900 Sobic002G249200--Sobic007G225900 Sobic004G124200 Sobic004G124200 Sobic002G249200--Sobic004G124200 Sobic003G322700 Sobic003G322700 Sobic002G266000--Sobic003G322700 Sobic002G266000--Sobic001G282600 Sobic006G104600 Sobic006G104600 Sobic002G266000--Sobic006G104600 Sobic002G266000--Sobic002G249200 Sobic004G261900 Sobic004G261900 Sobic002G266000--Sobic004G261900 Sobic007G004500 Sobic007G004500 Sobic002G266000--Sobic007G004500 Sobic004G034600 Sobic004G034600 Sobic002G266000--Sobic004G034600 Sobic005G149700 Sobic005G149700 Sobic002G266000--Sobic005G149700 Sobic004G225200 Sobic004G225200 Sobic002G266000--Sobic004G225200 Sobic001G282600--Sobic002G266000 Sobic001G282600--Sobic006G104600 Sobic006G199000 Sobic006G199000 Sobic001G282600--Sobic006G199000 Sobic001G282600--Sobic004G225200 Sobic007G210500 Sobic007G210500 Sobic001G282600--Sobic007G210500 Sobic004G329300 Sobic004G329300 Sobic001G282600--Sobic004G329300 Sobic008G153400 Sobic008G153400 Sobic001G282600--Sobic008G153400 Sobic003G355600 Sobic003G355600 Sobic001G282600--Sobic003G355600 Sobic001G282600--Sobic003G322700 Sobic009G161000--Sobic005G178100 Sobic004G101900 Sobic004G101900 Sobic009G161000--Sobic004G101900 Sobic001G325200 Sobic001G325200 Sobic009G161000--Sobic001G325200 Sobic006G100332 Sobic006G100332 Sobic009G161000--Sobic006G100332 Sobic003G105800 Sobic003G105800 Sobic009G161000--Sobic003G105800 Sobic004G260000 Sobic004G260000 Sobic009G161000--Sobic004G260000 Sobic009G226300 Sobic009G226300 Sobic009G161000--Sobic009G226300 Sobic001G305800 Sobic001G305800 Sobic009G161000--Sobic001G305800 Sobic009G161000--Sobic004G124200 Sobic010G043400 Sobic010G043400 Sobic002G274800--Sobic010G043400 Sobic002G274800--Sobic007G225900 Sobic003G252300 Sobic003G252300 Sobic002G274800--Sobic003G252300 Sobic002G274800--Sobic003G105800 Sobic002G274800--Sobic002G249200 Sobic008G189200 Sobic008G189200 Sobic002G274800--Sobic008G189200 Sobic002G274800--Sobic009G161000 Sobic002G274800--Sobic004G124200 Sobic002G274800--Sobic001G282600 Sobic009G207600 Sobic009G207600 Sobic001G504900--Sobic009G207600 Sobic003G398100 Sobic003G398100 Sobic001G504900--Sobic003G398100 Sobic001G504900--Sobic004G261900 Sobic001G504900--Sobic005G149700 Sobic001G504900--Sobic002G266000 Sobic002G338100 Sobic002G338100 Sobic001G504900--Sobic002G338100 Sobic001G069900 Sobic001G069900 Sobic001G504900--Sobic001G069900 Sobic006G181300 Sobic006G181300 Sobic001G504900--Sobic006G181300 Sobic001G015500 Sobic001G015500 Sobic001G504900--Sobic001G015500 Sobic005G178100--Sobic009G161000 Sobic005G178100--Sobic001G305800 Sobic003G087200 Sobic003G087200 Sobic005G178100--Sobic003G087200 Sobic002G420700 Sobic002G420700 Sobic005G178100--Sobic002G420700 Sobic005G178100--Sobic001G015500 Sobic005G178100--Sobic003G105800 Sobic009G034700 Sobic009G034700 Sobic005G178100--Sobic009G034700 Sobic003G184900 Sobic003G184900 Sobic005G178100--Sobic003G184900 Sobic001G150600 Sobic001G150600 Sobic005G178100--Sobic001G150600 Sobic001G207400 Sobic001G207400 Sobic010G203200--Sobic001G207400 Sobic010G203200--Sobic003G322700 Sobic010G203200--Sobic001G282600 Sobic010G203200--Sobic002G266000 Sobic002G430000 Sobic002G430000 Sobic010G203200--Sobic002G430000 Sobic004G355000 Sobic004G355000 Sobic010G203200--Sobic004G355000 Sobic010G203200--Sobic004G124200 Sobic010G001500 Sobic010G001500 Sobic010G203200--Sobic010G001500 Sobic010G203200--Sobic007G004500 Sobic007G225900--Sobic003G105800 Sobic007G225900--Sobic003G184900 Sobic008G079300 Sobic008G079300 Sobic007G225900--Sobic008G079300 Sobic007G225900--Sobic005G178100 Sobic007G225900--Sobic009G161000 Sobic007G225900--Sobic002G274800 Sobic004G320600 Sobic004G320600 Sobic007G225900--Sobic004G320600 Sobic007G225900--Sobic009G034700 Sobic007G225900--Sobic003G087200 Sobic003G388251 Sobic003G388251 Sobic004G124200--Sobic003G388251 Sobic004G124200--Sobic004G101900 Sobic004G124200--Sobic001G325200 Sobic004G124200--Sobic001G015500 Sobic004G124200--Sobic009G161000 Sobic004G124200--Sobic010G043400 Sobic004G124200--Sobic006G199000 Sobic007G068100 Sobic007G068100 Sobic004G124200--Sobic007G068100 Sobic004G124200--Sobic005G178100
Octagon: transcription factors


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