Gene annotation
Transcriptome id Sobic.008G079300.1
Synonym ATGSTF13, Sb08g007300
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
glutathione S-transferase, putative, expressed
UniProt C5YTU0
Pfam PF02798 PF00043
Panther DB PTHR11260 PTHR11260:SF311
NCBI CDD KOG0867; Glutathione S-transferase
KEGG Orthology K00799; GST, glutathione S-transferase
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G62760 : Glutathione S-transferase family protein
RAP-DB (Rice) LOC_Os01g27360.1 : glutathione S-transferase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS1A02G078800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G184900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@esterase, putative, expressed -
2 Sobic.003G105800 No apical meristem protein, putative, expressed -
3 Sobic.007G225900 OsWAK13 - OsWAK receptor-like protein kinase, expressed -
4 Sobic.004G321800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@saccharopine dehydrogenase, putative, expressed K14157: alpha-aminoadipic semialdehyde synthase
5 Sobic.009G207600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dnaJ domain containing protein, expressed -
6 Sobic.005G178100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@F-box/Kelch-repeat protein, putative, expressed -
7 Sobic.009G034700 aspartic proteinase oryzasin-1 precursor, putative, expressed K08245: phytepsin
8 Sobic.001G474500 mitochondrial carrier protein, putative, expressed -
9 Sobic.001G325200 Expressed in drought and oxidative stress(PubMedID : 29862293)@aldehyde oxidase, putative, expressed K00106: xanthine dehydrogenase/oxidase
10 Sobic.006G181300 Polyphenol oxidas(PubMedID : 28818380)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
11 Sobic.004G345800 Peroxisomal 3-ketoacyl-CoA thiolase 3 PKT3 (At)(PubMedID : 27208977)@3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed K07513: acetyl-CoA acyltransferase 1
12 Sobic.003G388251 - K01166: ribonuclease T2
13 Sobic.001G015500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
14 Sobic.003G087200 nuclease PA3, putative, expressed -
15 Sobic.009G226600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@wax synthase, putative, expressed -
16 Sobic.004G113300 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant
17 Sobic.005G169400 WIP5 - Wound-induced protein precursor, expressed -
18 Sobic.002G324000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@isocitrate lyase, putative, expressed K01637: E4.1.3.1, isocitrate lyase
19 Sobic.001G069900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
20 Sobic.004G060900 STRUBBELIG-RECEPTOR FAMILY 3 precursor, putative, expressed -


Gene co-expression network
sample Sobic008G079300 Sobic008G079300 Sobic003G184900 Sobic003G184900 Sobic008G079300--Sobic003G184900 Sobic003G105800 Sobic003G105800 Sobic008G079300--Sobic003G105800 Sobic007G225900 Sobic007G225900 Sobic008G079300--Sobic007G225900 Sobic004G321800 Sobic004G321800 Sobic008G079300--Sobic004G321800 Sobic009G207600 Sobic009G207600 Sobic008G079300--Sobic009G207600 Sobic005G178100 Sobic005G178100 Sobic008G079300--Sobic005G178100 Sobic009G034700 Sobic009G034700 Sobic008G079300--Sobic009G034700 Sobic001G474500 Sobic001G474500 Sobic008G079300--Sobic001G474500 Sobic001G325200 Sobic001G325200 Sobic008G079300--Sobic001G325200 Sobic003G184900--Sobic003G105800 Sobic003G184900--Sobic008G079300 Sobic003G184900--Sobic004G321800 Sobic006G100332 Sobic006G100332 Sobic003G184900--Sobic006G100332 Sobic003G184900--Sobic007G225900 Sobic002G324000 Sobic002G324000 Sobic003G184900--Sobic002G324000 Sobic003G087200 Sobic003G087200 Sobic003G184900--Sobic003G087200 Sobic003G184900--Sobic005G178100 Sobic001G182500 Sobic001G182500 Sobic003G184900--Sobic001G182500 Sobic003G105800--Sobic003G184900 Sobic003G105800--Sobic008G079300 Sobic003G105800--Sobic004G321800 Sobic003G105800--Sobic001G325200 Sobic002G304000 Sobic002G304000 Sobic003G105800--Sobic002G304000 Sobic003G105800--Sobic007G225900 Sobic003G105800--Sobic006G100332 Sobic003G105800--Sobic003G087200 Sobic009G226300 Sobic009G226300 Sobic003G105800--Sobic009G226300 Sobic007G225900--Sobic003G105800 Sobic007G225900--Sobic003G184900 Sobic007G225900--Sobic008G079300 Sobic007G225900--Sobic005G178100 Sobic009G161000 Sobic009G161000 Sobic007G225900--Sobic009G161000 Sobic002G274800 Sobic002G274800 Sobic007G225900--Sobic002G274800 Sobic004G320600 Sobic004G320600 Sobic007G225900--Sobic004G320600 Sobic007G225900--Sobic009G034700 Sobic007G225900--Sobic003G087200 Sobic004G321800--Sobic006G100332 Sobic004G321800--Sobic003G087200 Sobic003G148800 Sobic003G148800 Sobic004G321800--Sobic003G148800 Sobic004G321800--Sobic009G226300 Sobic004G321800--Sobic001G325200 Sobic004G321800--Sobic003G105800 Sobic004G321800--Sobic003G184900 Sobic001G150600 Sobic001G150600 Sobic004G321800--Sobic001G150600 Sobic004G321800--Sobic004G320600 Sobic001G504900 Sobic001G504900 Sobic009G207600--Sobic001G504900 Sobic003G398100 Sobic003G398100 Sobic009G207600--Sobic003G398100 Sobic002G338100 Sobic002G338100 Sobic009G207600--Sobic002G338100 Sobic009G207600--Sobic008G079300 Sobic009G207600--Sobic001G474500 Sobic008G153400 Sobic008G153400 Sobic009G207600--Sobic008G153400 Sobic001G496100 Sobic001G496100 Sobic009G207600--Sobic001G496100 Sobic006G091700 Sobic006G091700 Sobic009G207600--Sobic006G091700 Sobic009G207600--Sobic003G087200 Sobic005G178100--Sobic009G161000 Sobic001G305800 Sobic001G305800 Sobic005G178100--Sobic001G305800 Sobic005G178100--Sobic003G087200 Sobic002G420700 Sobic002G420700 Sobic005G178100--Sobic002G420700 Sobic001G015500 Sobic001G015500 Sobic005G178100--Sobic001G015500 Sobic005G178100--Sobic003G105800 Sobic005G178100--Sobic009G034700 Sobic005G178100--Sobic003G184900 Sobic005G178100--Sobic001G150600 Sobic009G034700--Sobic005G178100 Sobic003G388251 Sobic003G388251 Sobic009G034700--Sobic003G388251 Sobic004G124200 Sobic004G124200 Sobic009G034700--Sobic004G124200 Sobic009G034700--Sobic001G474500 Sobic001G069900 Sobic001G069900 Sobic009G034700--Sobic001G069900 Sobic006G028900 Sobic006G028900 Sobic009G034700--Sobic006G028900 Sobic009G034700--Sobic008G079300 Sobic009G034700--Sobic001G325200 Sobic009G034700--Sobic001G015500 Sobic007G068100 Sobic007G068100 Sobic001G474500--Sobic007G068100 Sobic001G474500--Sobic001G325200 Sobic009G057300 Sobic009G057300 Sobic001G474500--Sobic009G057300 Sobic004G060900 Sobic004G060900 Sobic001G474500--Sobic004G060900 Sobic001G474500--Sobic003G388251 Sobic001G474500--Sobic004G321800 Sobic003G428400 Sobic003G428400 Sobic001G474500--Sobic003G428400 Sobic001G130000 Sobic001G130000 Sobic001G474500--Sobic001G130000 Sobic001G474500--Sobic009G034700 Sobic001G325200--Sobic007G068100 Sobic001G325200--Sobic009G226300 Sobic001G325200--Sobic003G148800 Sobic001G325200--Sobic004G321800 Sobic004G101900 Sobic004G101900 Sobic001G325200--Sobic004G101900 Sobic001G325200--Sobic002G304000 Sobic009G054500 Sobic009G054500 Sobic001G325200--Sobic009G054500 Sobic001G325200--Sobic001G015500 Sobic003G355600 Sobic003G355600 Sobic001G325200--Sobic003G355600
Octagon: transcription factors


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