Gene annotation
Transcriptome id Sobic.001G474500.5,Sobic.001G474500.1,Sobic.001G474500.4
Synonym Sb01g044470
Functional annotation mitochondrial carrier protein, putative, expressed
UniProt A0A1B6QPZ8
Pfam PF00153
Panther DB PTHR24089 PTHR24089:SF292
NCBI CDD KOG0752; Mitochondrial solute carrier protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G64970 : Mitochondrial substrate carrier family protein
RAP-DB (Rice) LOC_Os03g09110.1 : mitochondrial carrier protein, putative, expressed
MaizeGDB (Corn) Zm00025a001042 , Zm00025a053212
Brachypodium KQK23187 , KQK23186 , PNT77996
Barley HORVU4Hr1G078650.1 , HORVU4Hr1G078650.2 , HORVU4Hr1G078650.3
Wheat TraesCS4A02G407200 , TraesCS4B02G306400 , TraesCS4D02G304600
Populus -


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cDNA sequences
Sobic.001G474500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G068100 aconitate hydratase protein, putative, expressed K01681: ACO, aconitate hydratase
2 Sobic.001G325200 Expressed in drought and oxidative stress(PubMedID : 29862293)@aldehyde oxidase, putative, expressed K00106: xanthine dehydrogenase/oxidase
3 Sobic.009G057300 acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
4 Sobic.004G060900 STRUBBELIG-RECEPTOR FAMILY 3 precursor, putative, expressed -
5 Sobic.003G388251 - K01166: ribonuclease T2
6 Sobic.004G321800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@saccharopine dehydrogenase, putative, expressed K14157: alpha-aminoadipic semialdehyde synthase
7 Sobic.003G428400 beta-galactosidase, putative, expressed K01190: beta-galactosidase
8 Sobic.001G130000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
9 Sobic.009G034700 aspartic proteinase oryzasin-1 precursor, putative, expressed K08245: phytepsin
10 Sobic.004G345800 Peroxisomal 3-ketoacyl-CoA thiolase 3 PKT3 (At)(PubMedID : 27208977)@3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed K07513: acetyl-CoA acyltransferase 1
11 Sobic.009G207600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@dnaJ domain containing protein, expressed -
12 Sobic.008G079300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
13 Sobic.003G061800 glutaryl-CoA dehydrogenase, mitochondrial precursor, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
14 Sobic.003G148800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K09699: DBT, 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase)
15 Sobic.001G015500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
16 Sobic.003G010600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K13606: NOL, chlorophyll(ide) b reductase
17 Sobic.003G329400 dihydropyrimidinase, putative, expressed K01464: DPYS, dht, dihydropyrimidinase
18 Sobic.004G101900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@citrate synthase, putative, expressed K01647: CS, citrate synthase
19 Sobic.003G184900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@esterase, putative, expressed -
20 Sobic.010G205500 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase


Gene co-expression network
sample Sobic001G474500 Sobic001G474500 Sobic007G068100 Sobic007G068100 Sobic001G474500--Sobic007G068100 Sobic001G325200 Sobic001G325200 Sobic001G474500--Sobic001G325200 Sobic009G057300 Sobic009G057300 Sobic001G474500--Sobic009G057300 Sobic004G060900 Sobic004G060900 Sobic001G474500--Sobic004G060900 Sobic003G388251 Sobic003G388251 Sobic001G474500--Sobic003G388251 Sobic004G321800 Sobic004G321800 Sobic001G474500--Sobic004G321800 Sobic003G428400 Sobic003G428400 Sobic001G474500--Sobic003G428400 Sobic001G130000 Sobic001G130000 Sobic001G474500--Sobic001G130000 Sobic009G034700 Sobic009G034700 Sobic001G474500--Sobic009G034700 Sobic007G068100--Sobic001G325200 Sobic007G068100--Sobic001G474500 Sobic007G068100--Sobic003G388251 Sobic003G148800 Sobic003G148800 Sobic007G068100--Sobic003G148800 Sobic007G068100--Sobic009G057300 Sobic004G101900 Sobic004G101900 Sobic007G068100--Sobic004G101900 Sobic007G068100--Sobic003G428400 Sobic009G226300 Sobic009G226300 Sobic007G068100--Sobic009G226300 Sobic007G068100--Sobic004G321800 Sobic001G325200--Sobic007G068100 Sobic001G325200--Sobic009G226300 Sobic001G325200--Sobic003G148800 Sobic001G325200--Sobic004G321800 Sobic001G325200--Sobic004G101900 Sobic002G304000 Sobic002G304000 Sobic001G325200--Sobic002G304000 Sobic009G054500 Sobic009G054500 Sobic001G325200--Sobic009G054500 Sobic001G015500 Sobic001G015500 Sobic001G325200--Sobic001G015500 Sobic003G355600 Sobic003G355600 Sobic001G325200--Sobic003G355600 Sobic003G061800 Sobic003G061800 Sobic009G057300--Sobic003G061800 Sobic009G057300--Sobic001G474500 Sobic009G057300--Sobic007G068100 Sobic009G057300--Sobic001G325200 Sobic009G057300--Sobic003G388251 Sobic003G329400 Sobic003G329400 Sobic009G057300--Sobic003G329400 Sobic003G354400 Sobic003G354400 Sobic009G057300--Sobic003G354400 Sobic001G334600 Sobic001G334600 Sobic009G057300--Sobic001G334600 Sobic001G322700 Sobic001G322700 Sobic009G057300--Sobic001G322700 Sobic004G060900--Sobic001G474500 Sobic004G060900--Sobic004G321800 Sobic004G060900--Sobic007G068100 Sobic004G060900--Sobic003G148800 Sobic004G060900--Sobic001G325200 Sobic002G324000 Sobic002G324000 Sobic004G060900--Sobic002G324000 Sobic009G229800 Sobic009G229800 Sobic004G060900--Sobic009G229800 Sobic004G060900--Sobic003G428400 Sobic004G060900--Sobic009G057300 Sobic004G124200 Sobic004G124200 Sobic003G388251--Sobic004G124200 Sobic003G388251--Sobic007G068100 Sobic003G388251--Sobic001G325200 Sobic003G388251--Sobic001G474500 Sobic003G388251--Sobic004G101900 Sobic005G178100 Sobic005G178100 Sobic003G388251--Sobic005G178100 Sobic003G388251--Sobic009G034700 Sobic003G388251--Sobic009G057300 Sobic003G388251--Sobic001G015500 Sobic006G100332 Sobic006G100332 Sobic004G321800--Sobic006G100332 Sobic003G087200 Sobic003G087200 Sobic004G321800--Sobic003G087200 Sobic004G321800--Sobic003G148800 Sobic004G321800--Sobic009G226300 Sobic004G321800--Sobic001G325200 Sobic003G105800 Sobic003G105800 Sobic004G321800--Sobic003G105800 Sobic003G184900 Sobic003G184900 Sobic004G321800--Sobic003G184900 Sobic001G150600 Sobic001G150600 Sobic004G321800--Sobic001G150600 Sobic004G320600 Sobic004G320600 Sobic004G321800--Sobic004G320600 Sobic003G428400--Sobic007G068100 Sobic003G428400--Sobic001G474500 Sobic003G428400--Sobic001G325200 Sobic003G428400--Sobic001G015500 Sobic010G205200 Sobic010G205200 Sobic003G428400--Sobic010G205200 Sobic001G069900 Sobic001G069900 Sobic003G428400--Sobic001G069900 Sobic003G428400--Sobic009G057300 Sobic001G438600 Sobic001G438600 Sobic003G428400--Sobic001G438600 Sobic010G112300 Sobic010G112300 Sobic003G428400--Sobic010G112300 Sobic001G130000--Sobic001G474500 Sobic001G130000--Sobic009G034700 Sobic001G130000--Sobic007G068100 Sobic001G130000--Sobic003G388251 Sobic001G130000--Sobic001G325200 Sobic001G130000--Sobic001G069900 Sobic008G079300 Sobic008G079300 Sobic001G130000--Sobic008G079300 Sobic008G017800 Sobic008G017800 Sobic001G130000--Sobic008G017800 Sobic004G345800 Sobic004G345800 Sobic001G130000--Sobic004G345800 Sobic009G034700--Sobic005G178100 Sobic009G034700--Sobic003G388251 Sobic009G034700--Sobic004G124200 Sobic009G034700--Sobic001G474500 Sobic009G034700--Sobic001G069900 Sobic006G028900 Sobic006G028900 Sobic009G034700--Sobic006G028900 Sobic009G034700--Sobic008G079300 Sobic009G034700--Sobic001G325200 Sobic009G034700--Sobic001G015500
Octagon: transcription factors


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