Gene annotation
Transcriptome id Sobic.010G205500.2,Sobic.010G205500.1
Synonym 1, ATAVP3, AtVHP1, AVP-3, Sb10g025280, AVP1
Functional annotation inorganic H+ pyrophosphatase, putative, expressed
UniProt A0A1W0VU28 , A0A1W0VU03
Pfam PF03030
Panther DB PTHR31998 PTHR31998:SF10
NCBI CDD -
KEGG Orthology K01507; inorganic pyrophosphatase
Gene Ontology GO:0016020; membrane GO:0009678pyrophosphate hydrolysis-driven proton transmembrane transporter activity GO:0004427inorganic diphosphatase activity


Orthologs (automatic annotation)
TAIR AT1G15690 : Inorganic H pyrophosphatase family protein
RAP-DB (Rice) LOC_Os02g09150.1 : inorganic H+ pyrophosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a051395 , Zm00025a049815 , Zm00025a042870 , Zm00025a025159 , Zm00025a034722 , Zm00025a019304
Brachypodium KQK19093 , KQK19346 , KQK16780 , KQK04235
Barley HORVU7Hr1G115540.11 , HORVU7Hr1G115540.10 , HORVU7Hr1G115540.5 , HORVU7Hr1G115540.4 , HORVU7Hr1G115540.7 , HORVU7Hr1G115540.6 , HORVU7Hr1G115540.1 , HORVU7Hr1G115540.3 , HORVU7Hr1G115540.2 , HORVU7Hr1G115540.9 , HORVU7Hr1G115540.8 , HORVU1Hr1G023100.1 , HORVU1Hr1G023100.2 , HORVU1Hr1G061140.9 , HORVU1Hr1G061140.8 , HORVU1Hr1G061140.3 , HORVU1Hr1G061140.2 , HORVU1Hr1G061140.1 , HORVU1Hr1G061140.7 , HORVU1Hr1G061140.6 , HORVU1Hr1G061140.5 , HORVU1Hr1G061140.4 , HORVU1Hr1G061140.12 , HORVU1Hr1G061140.11 , HORVU1Hr1G061140.10
Wheat TraesCS1B02G124600 , TraesCS7A02G141300 , TraesCS7D02G142600 , TraesCS7A02G141300 , TraesCS7D02G142600 , TraesCS7A02G517700 , TraesCS7A02G517700 , TraesCS7B02G433800 , TraesCS7A02G141300 , TraesCS1A02G107200 , TraesCS1A02G107200 , TraesCS1A02G253600 , TraesCS7D02G142600 , TraesCS7B02G042600 , TraesCS7B02G042600 , TraesCS7D02G507600
Populus PNT30074 , PNS94048 , PNS94009


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cDNA sequences
Sobic.010G205500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G474500 mitochondrial carrier protein, putative, expressed -
2 Sobic.007G068100 aconitate hydratase protein, putative, expressed K01681: ACO, aconitate hydratase
3 Sobic.004G266400 monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
4 Sobic.003G388251 - K01166: ribonuclease T2
5 Sobic.001G176600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
6 Sobic.001G111150 - K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
7 Sobic.003G100800 acetyl-CoA acetyltransferase, cytosolic, putative, expressed K00626: ACAT, acetyl-CoA C-acetyltransferase
8 Sobic.010G251200 UDP-glucose Pyrophosphorylase(PubMedID : 26616172)@UTP--glucose-1-phosphate uridylyltransferase, putative, expressed K12447: UDP-sugar pyrophosphorylase
9 Sobic.009G034700 aspartic proteinase oryzasin-1 precursor, putative, expressed K08245: phytepsin
10 Sobic.009G057300 acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
11 Sobic.001G248300 OsPOP21 - Putative Prolyl Oligopeptidase homologue, expressed K01303: acylaminoacyl-peptidase
12 Sobic.002G338100 THYLAKOID FORMATION1, chloroplast precursor, putative, expressed -
13 Sobic.002G415900 acyl-CoA dehydrogenase family member 10, putative, expressed K00249: ACADM, acyl-CoA dehydrogenase
14 Sobic.010G001500 AML1, putative, expressed -
15 Sobic.006G043600 cysteine proteinase 1 precursor, putative, expressed K01373: cathepsin F
16 Sobic.010G112300 aluminum-activated malate transporter, putative, expressed -
17 Sobic.003G428400 beta-galactosidase, putative, expressed K01190: beta-galactosidase
18 Sobic.001G146800 expressed protein -
19 Sobic.002G403500 tetratricopeptide-like helical, putative, expressed -
20 Sobic.002G430000 expressed protein K08518: STXBP5, syntaxin-binding protein 5


Gene co-expression network
sample Sobic010G205500 Sobic010G205500 Sobic001G474500 Sobic001G474500 Sobic010G205500--Sobic001G474500 Sobic007G068100 Sobic007G068100 Sobic010G205500--Sobic007G068100 Sobic004G266400 Sobic004G266400 Sobic010G205500--Sobic004G266400 Sobic003G388251 Sobic003G388251 Sobic010G205500--Sobic003G388251 Sobic001G176600 Sobic001G176600 Sobic010G205500--Sobic001G176600 Sobic001G111150 Sobic001G111150 Sobic010G205500--Sobic001G111150 Sobic003G100800 Sobic003G100800 Sobic010G205500--Sobic003G100800 Sobic010G251200 Sobic010G251200 Sobic010G205500--Sobic010G251200 Sobic009G034700 Sobic009G034700 Sobic010G205500--Sobic009G034700 Sobic001G474500--Sobic007G068100 Sobic001G325200 Sobic001G325200 Sobic001G474500--Sobic001G325200 Sobic009G057300 Sobic009G057300 Sobic001G474500--Sobic009G057300 Sobic004G060900 Sobic004G060900 Sobic001G474500--Sobic004G060900 Sobic001G474500--Sobic003G388251 Sobic004G321800 Sobic004G321800 Sobic001G474500--Sobic004G321800 Sobic003G428400 Sobic003G428400 Sobic001G474500--Sobic003G428400 Sobic001G130000 Sobic001G130000 Sobic001G474500--Sobic001G130000 Sobic001G474500--Sobic009G034700 Sobic007G068100--Sobic001G325200 Sobic007G068100--Sobic001G474500 Sobic007G068100--Sobic003G388251 Sobic003G148800 Sobic003G148800 Sobic007G068100--Sobic003G148800 Sobic007G068100--Sobic009G057300 Sobic004G101900 Sobic004G101900 Sobic007G068100--Sobic004G101900 Sobic007G068100--Sobic003G428400 Sobic009G226300 Sobic009G226300 Sobic007G068100--Sobic009G226300 Sobic007G068100--Sobic004G321800 Sobic006G043600 Sobic006G043600 Sobic004G266400--Sobic006G043600 Sobic006G204900 Sobic006G204900 Sobic004G266400--Sobic006G204900 Sobic002G159700 Sobic002G159700 Sobic004G266400--Sobic002G159700 Sobic001G016700 Sobic001G016700 Sobic004G266400--Sobic001G016700 Sobic010G224000 Sobic010G224000 Sobic004G266400--Sobic010G224000 Sobic003G322700 Sobic003G322700 Sobic004G266400--Sobic003G322700 Sobic001G462500 Sobic001G462500 Sobic004G266400--Sobic001G462500 Sobic001G121200 Sobic001G121200 Sobic004G266400--Sobic001G121200 Sobic001G207400 Sobic001G207400 Sobic004G266400--Sobic001G207400 Sobic004G124200 Sobic004G124200 Sobic003G388251--Sobic004G124200 Sobic003G388251--Sobic007G068100 Sobic003G388251--Sobic001G325200 Sobic003G388251--Sobic001G474500 Sobic003G388251--Sobic004G101900 Sobic005G178100 Sobic005G178100 Sobic003G388251--Sobic005G178100 Sobic003G388251--Sobic009G034700 Sobic003G388251--Sobic009G057300 Sobic001G015500 Sobic001G015500 Sobic003G388251--Sobic001G015500 Sobic002G338100 Sobic002G338100 Sobic001G176600--Sobic002G338100 Sobic001G176600--Sobic001G474500 Sobic001G176600--Sobic001G130000 Sobic001G176600--Sobic010G205500 Sobic008G017800 Sobic008G017800 Sobic001G176600--Sobic008G017800 Sobic001G176600--Sobic009G034700 Sobic001G176600--Sobic007G068100 Sobic001G359500 Sobic001G359500 Sobic001G176600--Sobic001G359500 Sobic001G069900 Sobic001G069900 Sobic001G176600--Sobic001G069900 Sobic010G130200 Sobic010G130200 Sobic001G111150--Sobic010G130200 Sobic001G111150--Sobic007G068100 Sobic001G111150--Sobic009G057300 Sobic003G354400 Sobic003G354400 Sobic001G111150--Sobic003G354400 Sobic010G001500 Sobic010G001500 Sobic001G111150--Sobic010G001500 Sobic001G111150--Sobic003G388251 Sobic001G111150--Sobic001G474500 Sobic004G127700 Sobic004G127700 Sobic001G111150--Sobic004G127700 Sobic001G111150--Sobic004G124200 Sobic004G052900 Sobic004G052900 Sobic003G100800--Sobic004G052900 Sobic007G172400 Sobic007G172400 Sobic003G100800--Sobic007G172400 Sobic003G109100 Sobic003G109100 Sobic003G100800--Sobic003G109100 Sobic007G024700 Sobic007G024700 Sobic003G100800--Sobic007G024700 Sobic004G329400 Sobic004G329400 Sobic003G100800--Sobic004G329400 Sobic001G248300 Sobic001G248300 Sobic003G100800--Sobic001G248300 Sobic001G178700 Sobic001G178700 Sobic003G100800--Sobic001G178700 Sobic003G100800--Sobic010G251200 Sobic004G113400 Sobic004G113400 Sobic003G100800--Sobic004G113400 Sobic010G251200--Sobic003G100800 Sobic009G094300 Sobic009G094300 Sobic010G251200--Sobic009G094300 Sobic010G251200--Sobic001G474500 Sobic003G259100 Sobic003G259100 Sobic010G251200--Sobic003G259100 Sobic006G037700 Sobic006G037700 Sobic010G251200--Sobic006G037700 Sobic010G251200--Sobic004G052900 Sobic010G251200--Sobic009G057300 Sobic010G251200--Sobic001G248300 Sobic007G088100 Sobic007G088100 Sobic010G251200--Sobic007G088100 Sobic009G034700--Sobic005G178100 Sobic009G034700--Sobic003G388251 Sobic009G034700--Sobic004G124200 Sobic009G034700--Sobic001G474500 Sobic009G034700--Sobic001G069900 Sobic006G028900 Sobic006G028900 Sobic009G034700--Sobic006G028900 Sobic008G079300 Sobic008G079300 Sobic009G034700--Sobic008G079300 Sobic009G034700--Sobic001G325200 Sobic009G034700--Sobic001G015500
Octagon: transcription factors


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