Gene annotation
Transcriptome id Sobic.001G248300.3,Sobic.001G248300.4,Sobic.001G248300.1,Sobic.001G248300.2
Synonym Sb01g021970
Functional annotation OsPOP21 - Putative Prolyl Oligopeptidase homologue, expressed
UniProt A0A1B6QKS3 , A0A1B6QKS0 , A0A1B6QKT3 , A0A1B6QKT1
Pfam PF07676 PF12695 PF07676 PF00326
Panther DB PTHR11731 PTHR11731:SF124
NCBI CDD KOG4391; Predicted alpha/beta hydrolase BEM46
KEGG Orthology K01303; acylaminoacyl-peptidase
Gene Ontology GO:0008236; serine-type peptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT4G14570 : acylaminoacyl-peptidase-related
RAP-DB (Rice) LOC_Os10g28020.1,LOC_Os10g28020.2 : OsPOP21 - Putative Prolyl Oligopeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a006919
Brachypodium KQJ96718 , KQJ96716 , PNT67386
Barley HORVU1Hr1G065960.9 , HORVU1Hr1G065960.8 , HORVU1Hr1G065960.5 , HORVU1Hr1G065960.4 , HORVU1Hr1G065960.7 , HORVU1Hr1G065960.6 , HORVU1Hr1G065960.1 , HORVU1Hr1G065960.3 , HORVU1Hr1G065960.2 , HORVU1Hr1G065960.14 , HORVU1Hr1G065960.11 , HORVU1Hr1G065960.10 , HORVU1Hr1G065960.13 , HORVU1Hr1G065960.12 , HORVU1Hr1G065960.15 , HORVU1Hr1G065960.16
Wheat TraesCS1A02G322300 , TraesCS1A02G322300 , TraesCS1B02G334600 , TraesCS1B02G334600 , TraesCS1B02G334600 , TraesCS1B02G334600 , TraesCS1B02G334600 , TraesCS1D02G322400 , TraesCS1D02G322400 , TraesCS1D02G322400 , TraesCS1D02G322400 , TraesCS1D02G322400 , TraesCS1D02G322400 , TraesCS1D02G322400
Populus -


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cDNA sequences
Sobic.001G248300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G355000 SAC9, putative, expressed -
2 Sobic.002G169900 hydrolase, NUDIX family, domain containing protein, expressed -
3 Sobic.001G178700 NBS-LRR disease resistance protein, putative, expressed -
4 Sobic.004G052900 biotin--protein ligase, putative, expressed K01942: biotin---protein ligase
5 Sobic.005G001000 RNA recognition motif containing protein, putative, expressed K10643: CNOT4, NOT4, CCR4-NOT transcription complex subunit 4
6 Sobic.009G094300 emp24/gp25L/p24 family protein, putative, expressed -
7 Sobic.010G112000 expressed protein K17906: autophagy-related protein 2
8 Sobic.004G329400 formin, putative, expressed -
9 Sobic.004G113400 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant
10 Sobic.010G224000 molybdenum cofactor sulfurase, putative, expressed K15631: molybdenum cofactor sulfurtransferase
11 Sobic.010G138000 FAD binding domain of DNA photolyase domain containing protein, expressed K12119: cryptochrome 2
12 Sobic.001G071400 WD domain, G-beta repeat domain containing protein, expressed K11293: HIRA, protein HIRA/HIR1
13 Sobic.006G040500 phospholipid-transporting ATPase 2, putative, expressed K01530: phospholipid-translocating ATPase
14 Sobic.006G055200 RNA-binding motif protein, putative, expressed K13192: RNA-binding protein 26
15 Sobic.003G186000 WD domain, G-beta repeat domain containing protein, expressed -
16 Sobic.007G172400 AAA-type ATPase family protein, putative, expressed K13338: peroxin-1
17 Sobic.001G291000 disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
18 Sobic.009G047200 protein kinase domain containing protein, expressed -
19 Sobic.002G403500 tetratricopeptide-like helical, putative, expressed -
20 Sobic.009G010600 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1


Gene co-expression network
sample Sobic001G248300 Sobic001G248300 Sobic004G355000 Sobic004G355000 Sobic001G248300--Sobic004G355000 Sobic002G169900 Sobic002G169900 Sobic001G248300--Sobic002G169900 Sobic001G178700 Sobic001G178700 Sobic001G248300--Sobic001G178700 Sobic004G052900 Sobic004G052900 Sobic001G248300--Sobic004G052900 Sobic005G001000 Sobic005G001000 Sobic001G248300--Sobic005G001000 Sobic009G094300 Sobic009G094300 Sobic001G248300--Sobic009G094300 Sobic010G112000 Sobic010G112000 Sobic001G248300--Sobic010G112000 Sobic004G329400 Sobic004G329400 Sobic001G248300--Sobic004G329400 Sobic004G113400 Sobic004G113400 Sobic001G248300--Sobic004G113400 Sobic001G207400 Sobic001G207400 Sobic004G355000--Sobic001G207400 Sobic002G430000 Sobic002G430000 Sobic004G355000--Sobic002G430000 Sobic004G355000--Sobic001G248300 Sobic004G355000--Sobic005G001000 Sobic004G355000--Sobic004G329400 Sobic005G157000 Sobic005G157000 Sobic004G355000--Sobic005G157000 Sobic003G322700 Sobic003G322700 Sobic004G355000--Sobic003G322700 Sobic004G355000--Sobic004G113400 Sobic009G010600 Sobic009G010600 Sobic004G355000--Sobic009G010600 Sobic002G169900--Sobic001G248300 Sobic010G138000 Sobic010G138000 Sobic002G169900--Sobic010G138000 Sobic007G193700 Sobic007G193700 Sobic002G169900--Sobic007G193700 Sobic010G175500 Sobic010G175500 Sobic002G169900--Sobic010G175500 Sobic001G327800 Sobic001G327800 Sobic002G169900--Sobic001G327800 Sobic007G116200 Sobic007G116200 Sobic002G169900--Sobic007G116200 Sobic006G055200 Sobic006G055200 Sobic002G169900--Sobic006G055200 Sobic010G175400 Sobic010G175400 Sobic002G169900--Sobic010G175400 Sobic009G211000 Sobic009G211000 Sobic002G169900--Sobic009G211000 Sobic001G178700--Sobic004G113400 Sobic001G178700--Sobic009G010600 Sobic001G178700--Sobic001G248300 Sobic001G291000 Sobic001G291000 Sobic001G178700--Sobic001G291000 Sobic001G474600 Sobic001G474600 Sobic001G178700--Sobic001G474600 Sobic001G146800 Sobic001G146800 Sobic001G178700--Sobic001G146800 Sobic001G178700--Sobic010G112000 Sobic007G172400 Sobic007G172400 Sobic001G178700--Sobic007G172400 Sobic001G178700--Sobic004G329400 Sobic003G109100 Sobic003G109100 Sobic004G052900--Sobic003G109100 Sobic007G024700 Sobic007G024700 Sobic004G052900--Sobic007G024700 Sobic003G100800 Sobic003G100800 Sobic004G052900--Sobic003G100800 Sobic004G052900--Sobic007G172400 Sobic002G340100 Sobic002G340100 Sobic004G052900--Sobic002G340100 Sobic002G419800 Sobic002G419800 Sobic004G052900--Sobic002G419800 Sobic006G245400 Sobic006G245400 Sobic004G052900--Sobic006G245400 Sobic004G052900--Sobic001G248300 Sobic004G052900--Sobic009G094300 Sobic001G194200 Sobic001G194200 Sobic005G001000--Sobic001G194200 Sobic002G008900 Sobic002G008900 Sobic005G001000--Sobic002G008900 Sobic001G370900 Sobic001G370900 Sobic005G001000--Sobic001G370900 Sobic003G205200 Sobic003G205200 Sobic005G001000--Sobic003G205200 Sobic004G291900 Sobic004G291900 Sobic005G001000--Sobic004G291900 Sobic003G186000 Sobic003G186000 Sobic005G001000--Sobic003G186000 Sobic008G001200 Sobic008G001200 Sobic005G001000--Sobic008G001200 Sobic003G422500 Sobic003G422500 Sobic005G001000--Sobic003G422500 Sobic009G256400 Sobic009G256400 Sobic005G001000--Sobic009G256400 Sobic009G094300--Sobic007G024700 Sobic009G094300--Sobic004G113400 Sobic002G270500 Sobic002G270500 Sobic009G094300--Sobic002G270500 Sobic009G094300--Sobic004G329400 Sobic009G094300--Sobic005G157000 Sobic009G094300--Sobic004G052900 Sobic001G270400 Sobic001G270400 Sobic009G094300--Sobic001G270400 Sobic009G094300--Sobic001G248300 Sobic009G094300--Sobic001G207400 Sobic001G498600 Sobic001G498600 Sobic010G112000--Sobic001G498600 Sobic004G034900 Sobic004G034900 Sobic010G112000--Sobic004G034900 Sobic010G112000--Sobic002G008900 Sobic001G540400 Sobic001G540400 Sobic010G112000--Sobic001G540400 Sobic001G289600 Sobic001G289600 Sobic010G112000--Sobic001G289600 Sobic010G112000--Sobic001G146800 Sobic005G008800 Sobic005G008800 Sobic010G112000--Sobic005G008800 Sobic001G280900 Sobic001G280900 Sobic010G112000--Sobic001G280900 Sobic001G058700 Sobic001G058700 Sobic010G112000--Sobic001G058700 Sobic004G329400--Sobic004G113400 Sobic009G027300 Sobic009G027300 Sobic004G329400--Sobic009G027300 Sobic004G329400--Sobic005G157000 Sobic004G329400--Sobic001G058700 Sobic004G329400--Sobic004G355000 Sobic004G269200 Sobic004G269200 Sobic004G329400--Sobic004G269200 Sobic004G329400--Sobic007G024700 Sobic004G329400--Sobic007G172400 Sobic003G408600 Sobic003G408600 Sobic004G329400--Sobic003G408600 Sobic004G113400--Sobic009G010600 Sobic004G113400--Sobic003G408600 Sobic004G113400--Sobic004G329400 Sobic004G113400--Sobic001G058700 Sobic008G099800 Sobic008G099800 Sobic004G113400--Sobic008G099800 Sobic004G113400--Sobic001G178700 Sobic001G117200 Sobic001G117200 Sobic004G113400--Sobic001G117200 Sobic001G534800 Sobic001G534800 Sobic004G113400--Sobic001G534800 Sobic004G113400--Sobic002G430000
Octagon: transcription factors


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