Gene annotation
Transcriptome id Sobic.002G169900.2,Sobic.002G169900.1
Synonym atnudt20, NUDT20, Sb02g021770
Functional annotation hydrolase, NUDIX family, domain containing protein, expressed
UniProt A0A1B6QBW1 , A0A1W0W4N0
Pfam PF00293 PF15916
Panther DB PTHR13622 PTHR13622:SF8
NCBI CDD KOG4313; Thiamine pyrophosphokinase
KEGG Orthology -
Gene Ontology GO:0016787; hydrolase activity


Orthologs (automatic annotation)
TAIR AT5G19460 : nudix hydrolase homolog 20
RAP-DB (Rice) LOC_Os09g15340.1 : hydrolase, NUDIX family, domain containing protein, expressed
MaizeGDB (Corn) Zm00025a046469
Brachypodium KQJ89816
Barley HORVU5Hr1G055890.8 , HORVU5Hr1G055890.9 , HORVU5Hr1G055890.6 , HORVU5Hr1G055890.4 , HORVU5Hr1G055890.2 , HORVU5Hr1G055890.3 , HORVU5Hr1G055890.1 , HORVU5Hr1G055890.7 , HORVU5Hr1G055890.5 , HORVU5Hr1G055890.10
Wheat TraesCS5A02G182900 , TraesCS5D02G188100 , TraesCS5D02G188100 , TraesCS5B02G181200 , TraesCS5B02G181200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G248300 OsPOP21 - Putative Prolyl Oligopeptidase homologue, expressed K01303: acylaminoacyl-peptidase
2 Sobic.010G138000 FAD binding domain of DNA photolyase domain containing protein, expressed K12119: cryptochrome 2
3 Sobic.007G193700 Sua5/YciO/YrdC/YwlC family protein, putative, expressed -
4 Sobic.010G175500 expressed protein -
5 Sobic.001G327800 uncharacterized mscS family protein, putative, expressed K16052: ynaI, MscS family membrane protein
6 Sobic.007G116200 expressed protein K13217: PRPF39, pre-mRNA-processing factor 39
7 Sobic.006G055200 RNA-binding motif protein, putative, expressed K13192: RNA-binding protein 26
8 Sobic.010G175400 - -
9 Sobic.009G211000 phosphotransferase, putative, expressed K14156: choline/ethanolamine kinase
10 Sobic.005G014700 aminotransferase, putative, expressed K11717: cysteine desulfurase / selenocysteine lyase
11 Sobic.002G403500 tetratricopeptide-like helical, putative, expressed -
12 Sobic.003G247500 expressed protein -
13 Sobic.004G266400 monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
14 Sobic.002G159700 - -
15 Sobic.003G186000 WD domain, G-beta repeat domain containing protein, expressed -
16 Sobic.005G001000 RNA recognition motif containing protein, putative, expressed K10643: CNOT4, NOT4, CCR4-NOT transcription complex subunit 4
17 Sobic.002G140700 triacylglycerol lipase 1 precursor, putative, expressed -
18 Sobic.001G014900 AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
19 Sobic.001G178700 NBS-LRR disease resistance protein, putative, expressed -
20 Sobic.001G194200 diacylglycerol kinase, putative, expressed -


Gene co-expression network
sample Sobic002G169900 Sobic002G169900 Sobic001G248300 Sobic001G248300 Sobic002G169900--Sobic001G248300 Sobic010G138000 Sobic010G138000 Sobic002G169900--Sobic010G138000 Sobic007G193700 Sobic007G193700 Sobic002G169900--Sobic007G193700 Sobic010G175500 Sobic010G175500 Sobic002G169900--Sobic010G175500 Sobic001G327800 Sobic001G327800 Sobic002G169900--Sobic001G327800 Sobic007G116200 Sobic007G116200 Sobic002G169900--Sobic007G116200 Sobic006G055200 Sobic006G055200 Sobic002G169900--Sobic006G055200 Sobic010G175400 Sobic010G175400 Sobic002G169900--Sobic010G175400 Sobic009G211000 Sobic009G211000 Sobic002G169900--Sobic009G211000 Sobic004G355000 Sobic004G355000 Sobic001G248300--Sobic004G355000 Sobic001G248300--Sobic002G169900 Sobic001G178700 Sobic001G178700 Sobic001G248300--Sobic001G178700 Sobic004G052900 Sobic004G052900 Sobic001G248300--Sobic004G052900 Sobic005G001000 Sobic005G001000 Sobic001G248300--Sobic005G001000 Sobic009G094300 Sobic009G094300 Sobic001G248300--Sobic009G094300 Sobic010G112000 Sobic010G112000 Sobic001G248300--Sobic010G112000 Sobic004G329400 Sobic004G329400 Sobic001G248300--Sobic004G329400 Sobic004G113400 Sobic004G113400 Sobic001G248300--Sobic004G113400 Sobic010G138000--Sobic010G175400 Sobic001G194200 Sobic001G194200 Sobic010G138000--Sobic001G194200 Sobic007G103100 Sobic007G103100 Sobic010G138000--Sobic007G103100 Sobic004G136300 Sobic004G136300 Sobic010G138000--Sobic004G136300 Sobic002G276100 Sobic002G276100 Sobic010G138000--Sobic002G276100 Sobic001G002000 Sobic001G002000 Sobic010G138000--Sobic001G002000 Sobic004G291900 Sobic004G291900 Sobic010G138000--Sobic004G291900 Sobic001G268200 Sobic001G268200 Sobic010G138000--Sobic001G268200 Sobic002G275700 Sobic002G275700 Sobic010G138000--Sobic002G275700 Sobic004G263600 Sobic004G263600 Sobic007G193700--Sobic004G263600 Sobic003G086900 Sobic003G086900 Sobic007G193700--Sobic003G086900 Sobic004G200200 Sobic004G200200 Sobic007G193700--Sobic004G200200 Sobic004G174200 Sobic004G174200 Sobic007G193700--Sobic004G174200 Sobic002G134200 Sobic002G134200 Sobic007G193700--Sobic002G134200 Sobic010G239600 Sobic010G239600 Sobic007G193700--Sobic010G239600 Sobic003G139900 Sobic003G139900 Sobic007G193700--Sobic003G139900 Sobic003G247500 Sobic003G247500 Sobic007G193700--Sobic003G247500 Sobic003G396200 Sobic003G396200 Sobic007G193700--Sobic003G396200 Sobic010G175500--Sobic010G138000 Sobic010G175500--Sobic002G169900 Sobic010G175500--Sobic007G103100 Sobic003G381200 Sobic003G381200 Sobic010G175500--Sobic003G381200 Sobic010G175500--Sobic010G175400 Sobic005G014700 Sobic005G014700 Sobic010G175500--Sobic005G014700 Sobic004G030100 Sobic004G030100 Sobic010G175500--Sobic004G030100 Sobic001G159400 Sobic001G159400 Sobic010G175500--Sobic001G159400 Sobic010G175500--Sobic002G276100 Sobic002G231200 Sobic002G231200 Sobic001G327800--Sobic002G231200 Sobic001G327800--Sobic005G014700 Sobic004G163800 Sobic004G163800 Sobic001G327800--Sobic004G163800 Sobic003G343400 Sobic003G343400 Sobic001G327800--Sobic003G343400 Sobic005G082200 Sobic005G082200 Sobic001G327800--Sobic005G082200 Sobic009G164400 Sobic009G164400 Sobic001G327800--Sobic009G164400 Sobic001G032700 Sobic001G032700 Sobic001G327800--Sobic001G032700 Sobic004G054400 Sobic004G054400 Sobic001G327800--Sobic004G054400 Sobic003G067100 Sobic003G067100 Sobic001G327800--Sobic003G067100 Sobic006G216800 Sobic006G216800 Sobic007G116200--Sobic006G216800 Sobic010G010700 Sobic010G010700 Sobic007G116200--Sobic010G010700 Sobic007G116200--Sobic002G134200 Sobic006G182900 Sobic006G182900 Sobic007G116200--Sobic006G182900 Sobic004G359800 Sobic004G359800 Sobic007G116200--Sobic004G359800 Sobic010G139000 Sobic010G139000 Sobic007G116200--Sobic010G139000 Sobic010G256700 Sobic010G256700 Sobic007G116200--Sobic010G256700 Sobic004G209600 Sobic004G209600 Sobic007G116200--Sobic004G209600 Sobic003G280800 Sobic003G280800 Sobic007G116200--Sobic003G280800 Sobic006G055200--Sobic001G194200 Sobic006G055200--Sobic010G010700 Sobic006G055200--Sobic005G001000 Sobic004G276400 Sobic004G276400 Sobic006G055200--Sobic004G276400 Sobic006G055200--Sobic004G291900 Sobic003G186000 Sobic003G186000 Sobic006G055200--Sobic003G186000 Sobic001G289800 Sobic001G289800 Sobic006G055200--Sobic001G289800 Sobic006G055200--Sobic004G263600 Sobic006G055200--Sobic001G002000 Sobic010G175400--Sobic010G138000 Sobic010G175400--Sobic007G103100 Sobic001G375100 Sobic001G375100 Sobic010G175400--Sobic001G375100 Sobic001G373900 Sobic001G373900 Sobic010G175400--Sobic001G373900 Sobic010G175400--Sobic003G186000 Sobic010G175400--Sobic003G247500 Sobic010G175400--Sobic001G194200 Sobic010G175400--Sobic006G055200 Sobic006G087700 Sobic006G087700 Sobic010G175400--Sobic006G087700 Sobic009G211000--Sobic002G169900 Sobic009G016600 Sobic009G016600 Sobic009G211000--Sobic009G016600 Sobic001G048766 Sobic001G048766 Sobic009G211000--Sobic001G048766 Sobic009G006400 Sobic009G006400 Sobic009G211000--Sobic009G006400 Sobic002G140700 Sobic002G140700 Sobic009G211000--Sobic002G140700 Sobic002G032700 Sobic002G032700 Sobic009G211000--Sobic002G032700 Sobic001G073500 Sobic001G073500 Sobic009G211000--Sobic001G073500 Sobic004G153501 Sobic004G153501 Sobic009G211000--Sobic004G153501 Sobic004G266400 Sobic004G266400 Sobic009G211000--Sobic004G266400
Octagon: transcription factors


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