Gene annotation
Transcriptome id Sobic.001G194200.1
Synonym Sb01g017100, LCBK1, ATLCBK1
Functional annotation diacylglycerol kinase, putative, expressed
UniProt C5WVD9
Pfam PF00781
Panther DB PTHR12358 PTHR12358:SF39
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016301; kinase activity


Orthologs (automatic annotation)
TAIR AT5G23450 : long-chain base (LCB) kinase 1
RAP-DB (Rice) LOC_Os10g37280.1 : diacylglycerol kinase, putative, expressed
MaizeGDB (Corn) Zm00025a006299
Brachypodium PNT67720 , KQJ97462 , KQJ97463 , PNT67719
Barley HORVU1Hr1G047730.8 , HORVU1Hr1G047730.9 , HORVU1Hr1G047730.1 , HORVU1Hr1G047730.2 , HORVU1Hr1G047730.3 , HORVU1Hr1G047730.4 , HORVU1Hr1G047730.5 , HORVU1Hr1G047730.6 , HORVU1Hr1G047730.7 , HORVU1Hr1G047730.10
Wheat TraesCS1B02G200000 , TraesCS1B02G200000 , TraesCS1B02G200000 , TraesCS1B02G200000 , TraesCS1B02G200000 , TraesCS1D02G184100 , TraesCS1D02G184100 , TraesCS1D02G184100 , TraesCS1D02G184100 , TraesCS1A02G180500 , TraesCS1A02G180500 , TraesCS1A02G180500
Populus -


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cDNA sequences
Sobic.001G194200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G291900 ESP4, putative, expressed K06100: symplekin
2 Sobic.006G055200 RNA-binding motif protein, putative, expressed K13192: RNA-binding protein 26
3 Sobic.005G001000 RNA recognition motif containing protein, putative, expressed K10643: CNOT4, NOT4, CCR4-NOT transcription complex subunit 4
4 Sobic.010G010700 PHD-finger family protein, expressed -
5 Sobic.004G276400 expressed protein K11320: E1A-binding protein p400
6 Sobic.001G289800 BAH domain containing protein, putative, expressed -
7 Sobic.008G001200 RNA recognition motif containing protein, putative, expressed -
8 Sobic.010G206900 transcription initiation factor TFIID subunit 1, putative, expressed K03125: transcription initiation factor TFIID subunit 1
9 Sobic.004G034900 histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
10 Sobic.001G370900 expressed protein K11665: INO80, DNA helicase INO80
11 Sobic.001G002000 protein kinase domain containing protein, expressed -
12 Sobic.003G422500 expressed protein -
13 Sobic.006G041600 WD domain, G-beta repeat domain containing protein, expressed K17985: activating molecule in BECN1-regulated autophagy protein 1
14 Sobic.009G256400 ATP binding protein, putative, expressed K15192: BTAF1, TATA-binding protein-associated factor
15 Sobic.003G186000 WD domain, G-beta repeat domain containing protein, expressed -
16 Sobic.003G205200 expressed protein K19027: zinc finger FYVE domain-containing protein 26
17 Sobic.003G196300 DNA binding protein, putative, expressed -
18 Sobic.007G103100 SWP, putative, expressed K15156: MED14, mediator of RNA polymerase II transcription subunit 14
19 Sobic.004G174200 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12813: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
20 Sobic.003G155100 suppressor of Mek, putative, expressed K17491: SMEK, protein phosphatase 4 regulatory subunit 3


Gene co-expression network
sample Sobic001G194200 Sobic001G194200 Sobic004G291900 Sobic004G291900 Sobic001G194200--Sobic004G291900 Sobic006G055200 Sobic006G055200 Sobic001G194200--Sobic006G055200 Sobic005G001000 Sobic005G001000 Sobic001G194200--Sobic005G001000 Sobic010G010700 Sobic010G010700 Sobic001G194200--Sobic010G010700 Sobic004G276400 Sobic004G276400 Sobic001G194200--Sobic004G276400 Sobic001G289800 Sobic001G289800 Sobic001G194200--Sobic001G289800 Sobic008G001200 Sobic008G001200 Sobic001G194200--Sobic008G001200 Sobic010G206900 Sobic010G206900 Sobic001G194200--Sobic010G206900 Sobic004G034900 Sobic004G034900 Sobic001G194200--Sobic004G034900 Sobic004G291900--Sobic001G194200 Sobic004G291900--Sobic001G289800 Sobic004G174200 Sobic004G174200 Sobic004G291900--Sobic004G174200 Sobic004G291900--Sobic004G276400 Sobic004G291900--Sobic005G001000 Sobic004G291900--Sobic004G034900 Sobic009G256400 Sobic009G256400 Sobic004G291900--Sobic009G256400 Sobic001G002000 Sobic001G002000 Sobic004G291900--Sobic001G002000 Sobic004G291900--Sobic010G010700 Sobic006G055200--Sobic001G194200 Sobic006G055200--Sobic010G010700 Sobic006G055200--Sobic005G001000 Sobic006G055200--Sobic004G276400 Sobic006G055200--Sobic004G291900 Sobic003G186000 Sobic003G186000 Sobic006G055200--Sobic003G186000 Sobic006G055200--Sobic001G289800 Sobic004G263600 Sobic004G263600 Sobic006G055200--Sobic004G263600 Sobic006G055200--Sobic001G002000 Sobic005G001000--Sobic001G194200 Sobic002G008900 Sobic002G008900 Sobic005G001000--Sobic002G008900 Sobic001G370900 Sobic001G370900 Sobic005G001000--Sobic001G370900 Sobic003G205200 Sobic003G205200 Sobic005G001000--Sobic003G205200 Sobic005G001000--Sobic004G291900 Sobic005G001000--Sobic003G186000 Sobic005G001000--Sobic008G001200 Sobic003G422500 Sobic003G422500 Sobic005G001000--Sobic003G422500 Sobic005G001000--Sobic009G256400 Sobic010G010700--Sobic010G206900 Sobic010G010700--Sobic004G034900 Sobic010G010700--Sobic004G276400 Sobic010G010700--Sobic001G194200 Sobic007G062800 Sobic007G062800 Sobic010G010700--Sobic007G062800 Sobic010G010700--Sobic002G008900 Sobic005G112300 Sobic005G112300 Sobic010G010700--Sobic005G112300 Sobic010G010700--Sobic008G001200 Sobic010G010700--Sobic003G186000 Sobic004G276400--Sobic003G186000 Sobic004G276400--Sobic010G010700 Sobic010G105200 Sobic010G105200 Sobic004G276400--Sobic010G105200 Sobic004G276400--Sobic001G194200 Sobic004G276400--Sobic004G034900 Sobic004G276400--Sobic007G062800 Sobic004G276400--Sobic004G291900 Sobic004G242400 Sobic004G242400 Sobic004G276400--Sobic004G242400 Sobic004G276400--Sobic008G001200 Sobic001G289600 Sobic001G289600 Sobic001G289800--Sobic001G289600 Sobic001G289800--Sobic003G422500 Sobic001G289800--Sobic001G194200 Sobic001G289800--Sobic004G291900 Sobic001G289800--Sobic004G034900 Sobic001G289800--Sobic001G002000 Sobic001G289800--Sobic010G010700 Sobic001G289800--Sobic007G062800 Sobic001G289800--Sobic005G001000 Sobic003G155100 Sobic003G155100 Sobic008G001200--Sobic003G155100 Sobic008G001200--Sobic010G206900 Sobic008G001200--Sobic009G256400 Sobic008G001200--Sobic003G205200 Sobic008G001200--Sobic010G010700 Sobic008G001200--Sobic001G194200 Sobic008G001200--Sobic005G001000 Sobic008G001200--Sobic004G276400 Sobic008G001200--Sobic004G174200 Sobic010G206900--Sobic010G010700 Sobic001G365900 Sobic001G365900 Sobic010G206900--Sobic001G365900 Sobic010G206900--Sobic004G034900 Sobic001G534700 Sobic001G534700 Sobic010G206900--Sobic001G534700 Sobic010G247800 Sobic010G247800 Sobic010G206900--Sobic010G247800 Sobic002G411600 Sobic002G411600 Sobic010G206900--Sobic002G411600 Sobic010G206900--Sobic008G001200 Sobic003G196300 Sobic003G196300 Sobic010G206900--Sobic003G196300 Sobic009G165700 Sobic009G165700 Sobic010G206900--Sobic009G165700 Sobic004G034900--Sobic001G289600 Sobic004G034900--Sobic010G206900 Sobic004G034900--Sobic010G010700 Sobic004G034900--Sobic002G411600 Sobic001G540400 Sobic001G540400 Sobic004G034900--Sobic001G540400 Sobic004G034900--Sobic003G422500 Sobic004G034900--Sobic004G276400 Sobic004G034900--Sobic002G008900 Sobic004G034900--Sobic007G062800
Octagon: transcription factors


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