Gene annotation
Transcriptome id Sobic.004G034900.1
Synonym ATHAC1, ATHPCAT2, Sb04g003020, PCAT2, HAC1
Functional annotation histone acetyltransferase HAC1, putative, expressed
UniProt C5XTZ4
Pfam PF00569 PF02135 PF08214
Panther DB PTHR13808
NCBI CDD KOG1778; CREB binding protein/P300 and related TAZ Zn-finger proteins
KEGG Orthology K04498; EP300, CREBBP, E1A/CREB-binding protein
Gene Ontology GO:0008270; zinc ion binding GO:0006355regulation of transcription, DNA-templated GO:0005634nucleus GO:0004402histone acetyltransferase activity GO:0003712transcription coregulator activity GO:0016573histone acetylation


Orthologs (automatic annotation)
TAIR AT1G16710 : histone acetyltransferase of the CBP family 12
RAP-DB (Rice) LOC_Os02g04490.1 : histone acetyltransferase HAC1, putative, expressed
MaizeGDB (Corn) Zm00025a031000 , Zm00025a035027 , Zm00025a018920
Brachypodium KQK17450 , KQJ93234
Barley HORVU7Hr1G096240.8 , HORVU7Hr1G096240.9 , HORVU7Hr1G096240.4 , HORVU7Hr1G096240.5 , HORVU7Hr1G096240.6 , HORVU7Hr1G096240.7 , HORVU6Hr1G019190.12 , HORVU6Hr1G019190.10 , HORVU6Hr1G019190.11 , HORVU6Hr1G019190.1 , HORVU6Hr1G019190.2 , HORVU6Hr1G019190.3 , HORVU6Hr1G019190.4 , HORVU6Hr1G019190.5 , HORVU6Hr1G019190.6 , HORVU6Hr1G019190.7 , HORVU6Hr1G019190.8 , HORVU6Hr1G019190.9 , HORVU7Hr1G096240.11
Wheat TraesCS6B02G135800 , TraesCS6D02G317200 , TraesCS6A02G107300 , TraesCS6A02G107300 , TraesCS6B02G367300 , TraesCS7D02G407600 , TraesCS7D02G407600 , TraesCS7A02G414500 , TraesCS7A02G414500 , TraesCS7B02G314400 , TraesCS7B02G314400 , TraesCS6D02G095400
Populus PNT26245 , PNT02242 , PNT02243 , PNT02240 , PNT02241 , PNT02244 , PNT02245 , PNT02239


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G289600 BAH domain containing protein, putative, expressed -
2 Sobic.010G206900 transcription initiation factor TFIID subunit 1, putative, expressed K03125: transcription initiation factor TFIID subunit 1
3 Sobic.010G010700 PHD-finger family protein, expressed -
4 Sobic.002G411600 CW-type Zinc Finger, putative, expressed -
5 Sobic.001G540400 expressed protein -
6 Sobic.003G422500 expressed protein -
7 Sobic.004G276400 expressed protein K11320: E1A-binding protein p400
8 Sobic.002G008900 sister chromatid cohesion 2, putative, expressed K06672: SCC2, cohesin loading factor subunit SCC2
9 Sobic.007G062800 SET domain containing protein, expressed -
10 Sobic.001G289800 BAH domain containing protein, putative, expressed -
11 Sobic.001G194200 diacylglycerol kinase, putative, expressed -
12 Sobic.004G291900 ESP4, putative, expressed K06100: symplekin
13 Sobic.003G196300 DNA binding protein, putative, expressed -
14 Sobic.010G105200 SYD, putative, expressed -
15 Sobic.005G001000 RNA recognition motif containing protein, putative, expressed K10643: CNOT4, NOT4, CCR4-NOT transcription complex subunit 4
16 Sobic.009G191000 MATH domain containing protein, expressed -
17 Sobic.001G365900 PWWP domain containing protein, expressed -
18 Sobic.002G405800 PHD-finger family protein, expressed -
19 Sobic.001G002000 protein kinase domain containing protein, expressed -
20 Sobic.003G205200 expressed protein K19027: zinc finger FYVE domain-containing protein 26


Gene co-expression network
sample Sobic004G034900 Sobic004G034900 Sobic001G289600 Sobic001G289600 Sobic004G034900--Sobic001G289600 Sobic010G206900 Sobic010G206900 Sobic004G034900--Sobic010G206900 Sobic010G010700 Sobic010G010700 Sobic004G034900--Sobic010G010700 Sobic002G411600 Sobic002G411600 Sobic004G034900--Sobic002G411600 Sobic001G540400 Sobic001G540400 Sobic004G034900--Sobic001G540400 Sobic003G422500 Sobic003G422500 Sobic004G034900--Sobic003G422500 Sobic004G276400 Sobic004G276400 Sobic004G034900--Sobic004G276400 Sobic002G008900 Sobic002G008900 Sobic004G034900--Sobic002G008900 Sobic007G062800 Sobic007G062800 Sobic004G034900--Sobic007G062800 Sobic001G289600--Sobic001G540400 Sobic001G289600--Sobic004G034900 Sobic001G289800 Sobic001G289800 Sobic001G289600--Sobic001G289800 Sobic001G289600--Sobic003G422500 Sobic001G365900 Sobic001G365900 Sobic001G289600--Sobic001G365900 Sobic009G191000 Sobic009G191000 Sobic001G289600--Sobic009G191000 Sobic005G008800 Sobic005G008800 Sobic001G289600--Sobic005G008800 Sobic007G105100 Sobic007G105100 Sobic001G289600--Sobic007G105100 Sobic001G289600--Sobic010G010700 Sobic010G206900--Sobic010G010700 Sobic010G206900--Sobic001G365900 Sobic010G206900--Sobic004G034900 Sobic001G534700 Sobic001G534700 Sobic010G206900--Sobic001G534700 Sobic010G247800 Sobic010G247800 Sobic010G206900--Sobic010G247800 Sobic010G206900--Sobic002G411600 Sobic008G001200 Sobic008G001200 Sobic010G206900--Sobic008G001200 Sobic003G196300 Sobic003G196300 Sobic010G206900--Sobic003G196300 Sobic009G165700 Sobic009G165700 Sobic010G206900--Sobic009G165700 Sobic010G010700--Sobic010G206900 Sobic010G010700--Sobic004G034900 Sobic010G010700--Sobic004G276400 Sobic001G194200 Sobic001G194200 Sobic010G010700--Sobic001G194200 Sobic010G010700--Sobic007G062800 Sobic010G010700--Sobic002G008900 Sobic005G112300 Sobic005G112300 Sobic010G010700--Sobic005G112300 Sobic010G010700--Sobic008G001200 Sobic003G186000 Sobic003G186000 Sobic010G010700--Sobic003G186000 Sobic002G411600--Sobic009G191000 Sobic002G411600--Sobic003G422500 Sobic002G411600--Sobic010G206900 Sobic002G411600--Sobic002G008900 Sobic002G411600--Sobic004G034900 Sobic004G174200 Sobic004G174200 Sobic002G411600--Sobic004G174200 Sobic002G411600--Sobic010G247800 Sobic002G411600--Sobic001G534700 Sobic003G101400 Sobic003G101400 Sobic002G411600--Sobic003G101400 Sobic001G540400--Sobic001G289600 Sobic003G408600 Sobic003G408600 Sobic001G540400--Sobic003G408600 Sobic001G540400--Sobic007G062800 Sobic001G540400--Sobic005G008800 Sobic001G540400--Sobic004G034900 Sobic001G540400--Sobic005G112300 Sobic001G540400--Sobic003G422500 Sobic002G397500 Sobic002G397500 Sobic001G540400--Sobic002G397500 Sobic010G112100 Sobic010G112100 Sobic001G540400--Sobic010G112100 Sobic003G422500--Sobic002G411600 Sobic003G422500--Sobic009G191000 Sobic003G422500--Sobic001G289600 Sobic003G422500--Sobic009G165700 Sobic003G422500--Sobic002G008900 Sobic003G422500--Sobic004G034900 Sobic003G422500--Sobic001G289800 Sobic003G422500--Sobic001G540400 Sobic008G132600 Sobic008G132600 Sobic003G422500--Sobic008G132600 Sobic004G276400--Sobic003G186000 Sobic004G276400--Sobic010G010700 Sobic010G105200 Sobic010G105200 Sobic004G276400--Sobic010G105200 Sobic004G276400--Sobic001G194200 Sobic004G276400--Sobic004G034900 Sobic004G276400--Sobic007G062800 Sobic004G291900 Sobic004G291900 Sobic004G276400--Sobic004G291900 Sobic004G242400 Sobic004G242400 Sobic004G276400--Sobic004G242400 Sobic004G276400--Sobic008G001200 Sobic002G008900--Sobic009G191000 Sobic002G008900--Sobic002G411600 Sobic002G008900--Sobic007G062800 Sobic002G008900--Sobic003G422500 Sobic005G001000 Sobic005G001000 Sobic002G008900--Sobic005G001000 Sobic002G008900--Sobic010G010700 Sobic002G008900--Sobic004G034900 Sobic002G008900--Sobic010G206900 Sobic009G053900 Sobic009G053900 Sobic002G008900--Sobic009G053900 Sobic007G062800--Sobic001G540400 Sobic007G062800--Sobic005G112300 Sobic002G405800 Sobic002G405800 Sobic007G062800--Sobic002G405800 Sobic007G062800--Sobic002G008900 Sobic007G062800--Sobic010G010700 Sobic007G062800--Sobic004G242400 Sobic007G062800--Sobic004G034900 Sobic007G062800--Sobic004G276400 Sobic007G062800--Sobic002G397500
Octagon: transcription factors


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