Gene annotation
Transcriptome id Sobic.001G289600.1
Synonym Sb01g028380
Functional annotation BAH domain containing protein, putative, expressed
UniProt A0A1B6QLT1
Pfam PF01426 PF08711
Panther DB PTHR15141 PTHR15141:SF52
NCBI CDD KOG1886; BAH domain proteins
KEGG Orthology -
Gene Ontology GO:0003682; chromatin binding GO:0006351transcription, DNA-templated GO:0005634nucleus GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT3G48050 : BAH domain ;TFIIS helical bundle-like domain
RAP-DB (Rice) LOC_Os02g50840.2 : BAH domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a051830 , Zm00025a051831 , Zm00025a003481
Brachypodium KQK01972 , KQK01970 , KQK01971 , KQK01969 , KQK01968 , PNT69650 , KQK01967
Barley HORVU0Hr1G017170.6 , HORVU0Hr1G017170.4 , HORVU0Hr1G017170.2 , HORVU0Hr1G017170.5 , HORVU0Hr1G017170.3 , HORVU0Hr1G017170.1 , HORVU0Hr1G017170.7 , HORVU0Hr1G017170.8 , HORVU0Hr1G017170.9
Wheat TraesCS6B02G338200 , TraesCS6B02G338200 , TraesCS6B02G338200 , TraesCS6B02G338200 , TraesCS6A02G309100 , TraesCS6D02G288400 , TraesCS6A02G309200 , TraesCS6A02G309200 , TraesCS6A02G309200 , TraesCS6B02G338100 , TraesCS6B02G338100 , TraesCS6B02G338100 , TraesCS6D02G288500 , TraesCS6D02G288500 , TraesCS6D02G288500 , TraesCS6D02G288500 , TraesCS6A02G309100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G540400 expressed protein -
2 Sobic.004G034900 histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
3 Sobic.001G289800 BAH domain containing protein, putative, expressed -
4 Sobic.003G422500 expressed protein -
5 Sobic.001G365900 PWWP domain containing protein, expressed -
6 Sobic.009G191000 MATH domain containing protein, expressed -
7 Sobic.005G008800 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR
8 Sobic.007G105100 STE_MEK_ste7_MAP2K.8 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K04368: MAP2K1, mitogen-activated protein kinase kinase 1
9 Sobic.010G010700 PHD-finger family protein, expressed -
10 Sobic.002G405800 PHD-finger family protein, expressed -
11 Sobic.002G411600 CW-type Zinc Finger, putative, expressed -
12 Sobic.009G053900 HECT-domain domain containing protein, expressed K10589: ubiquitin-protein ligase E3 C
13 Sobic.002G309600 DNA-binding protein, putative, expressed K14326: UPF1, regulator of nonsense transcripts 1
14 Sobic.002G008900 sister chromatid cohesion 2, putative, expressed K06672: SCC2, cohesin loading factor subunit SCC2
15 Sobic.001G154900 "GL3.1/qGL3(Ortholog in rice:Qi et al., 2012, Zhang et al., 2012)"(PubMedID : 31659834)@serine/threonine protein phosphatase, putative, expressed -
16 Sobic.007G062800 SET domain containing protein, expressed -
17 Sobic.005G112300 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
18 Sobic.010G206900 transcription initiation factor TFIID subunit 1, putative, expressed K03125: transcription initiation factor TFIID subunit 1
19 Sobic.003G313500 MATH domain containing protein, expressed -
20 Sobic.001G002000 protein kinase domain containing protein, expressed -


Gene co-expression network
sample Sobic001G289600 Sobic001G289600 Sobic001G540400 Sobic001G540400 Sobic001G289600--Sobic001G540400 Sobic004G034900 Sobic004G034900 Sobic001G289600--Sobic004G034900 Sobic001G289800 Sobic001G289800 Sobic001G289600--Sobic001G289800 Sobic003G422500 Sobic003G422500 Sobic001G289600--Sobic003G422500 Sobic001G365900 Sobic001G365900 Sobic001G289600--Sobic001G365900 Sobic009G191000 Sobic009G191000 Sobic001G289600--Sobic009G191000 Sobic005G008800 Sobic005G008800 Sobic001G289600--Sobic005G008800 Sobic007G105100 Sobic007G105100 Sobic001G289600--Sobic007G105100 Sobic010G010700 Sobic010G010700 Sobic001G289600--Sobic010G010700 Sobic001G540400--Sobic001G289600 Sobic003G408600 Sobic003G408600 Sobic001G540400--Sobic003G408600 Sobic007G062800 Sobic007G062800 Sobic001G540400--Sobic007G062800 Sobic001G540400--Sobic005G008800 Sobic001G540400--Sobic004G034900 Sobic005G112300 Sobic005G112300 Sobic001G540400--Sobic005G112300 Sobic001G540400--Sobic003G422500 Sobic002G397500 Sobic002G397500 Sobic001G540400--Sobic002G397500 Sobic010G112100 Sobic010G112100 Sobic001G540400--Sobic010G112100 Sobic004G034900--Sobic001G289600 Sobic010G206900 Sobic010G206900 Sobic004G034900--Sobic010G206900 Sobic004G034900--Sobic010G010700 Sobic002G411600 Sobic002G411600 Sobic004G034900--Sobic002G411600 Sobic004G034900--Sobic001G540400 Sobic004G034900--Sobic003G422500 Sobic004G276400 Sobic004G276400 Sobic004G034900--Sobic004G276400 Sobic002G008900 Sobic002G008900 Sobic004G034900--Sobic002G008900 Sobic004G034900--Sobic007G062800 Sobic001G289800--Sobic001G289600 Sobic001G289800--Sobic003G422500 Sobic001G194200 Sobic001G194200 Sobic001G289800--Sobic001G194200 Sobic004G291900 Sobic004G291900 Sobic001G289800--Sobic004G291900 Sobic001G289800--Sobic004G034900 Sobic001G002000 Sobic001G002000 Sobic001G289800--Sobic001G002000 Sobic001G289800--Sobic010G010700 Sobic001G289800--Sobic007G062800 Sobic005G001000 Sobic005G001000 Sobic001G289800--Sobic005G001000 Sobic003G422500--Sobic002G411600 Sobic003G422500--Sobic009G191000 Sobic003G422500--Sobic001G289600 Sobic009G165700 Sobic009G165700 Sobic003G422500--Sobic009G165700 Sobic003G422500--Sobic002G008900 Sobic003G422500--Sobic004G034900 Sobic003G422500--Sobic001G289800 Sobic003G422500--Sobic001G540400 Sobic008G132600 Sobic008G132600 Sobic003G422500--Sobic008G132600 Sobic001G365900--Sobic010G206900 Sobic001G534700 Sobic001G534700 Sobic001G365900--Sobic001G534700 Sobic001G365900--Sobic001G289600 Sobic008G130100 Sobic008G130100 Sobic001G365900--Sobic008G130100 Sobic001G365900--Sobic002G411600 Sobic001G365900--Sobic002G008900 Sobic001G365900--Sobic009G191000 Sobic001G365900--Sobic004G034900 Sobic001G365900--Sobic001G540400 Sobic009G191000--Sobic002G008900 Sobic009G191000--Sobic002G411600 Sobic009G191000--Sobic003G422500 Sobic009G053900 Sobic009G053900 Sobic009G191000--Sobic009G053900 Sobic009G191000--Sobic001G289600 Sobic003G313500 Sobic003G313500 Sobic009G191000--Sobic003G313500 Sobic010G247800 Sobic010G247800 Sobic009G191000--Sobic010G247800 Sobic009G191000--Sobic004G034900 Sobic009G191000--Sobic001G365900 Sobic005G008800--Sobic001G540400 Sobic005G008800--Sobic003G408600 Sobic005G008800--Sobic005G112300 Sobic005G008800--Sobic007G062800 Sobic005G008800--Sobic001G289600 Sobic004G314000 Sobic004G314000 Sobic005G008800--Sobic004G314000 Sobic008G009700 Sobic008G009700 Sobic005G008800--Sobic008G009700 Sobic005G008800--Sobic001G289800 Sobic009G109200 Sobic009G109200 Sobic005G008800--Sobic009G109200 Sobic007G105100--Sobic005G112300 Sobic007G105100--Sobic001G289600 Sobic007G105100--Sobic003G408600 Sobic007G105100--Sobic010G010700 Sobic007G105100--Sobic007G062800 Sobic007G105100--Sobic005G008800 Sobic007G105100--Sobic001G540400 Sobic003G360400 Sobic003G360400 Sobic007G105100--Sobic003G360400 Sobic007G105100--Sobic010G112100 Sobic010G010700--Sobic010G206900 Sobic010G010700--Sobic004G034900 Sobic010G010700--Sobic004G276400 Sobic010G010700--Sobic001G194200 Sobic010G010700--Sobic007G062800 Sobic010G010700--Sobic002G008900 Sobic010G010700--Sobic005G112300 Sobic008G001200 Sobic008G001200 Sobic010G010700--Sobic008G001200 Sobic003G186000 Sobic003G186000 Sobic010G010700--Sobic003G186000
Octagon: transcription factors


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