Gene annotation
Transcriptome id Sobic.005G008800.1,Sobic.005G008800.2,Sobic.005G008800.4,Sobic.005G008800.3
Synonym RAPTOR1B, RAPTOR1, ATRAPTOR1B
Functional annotation WD domain and HEAT domain containing protein, putative, expressed
UniProt A0A1B6PPJ4 , A0A1B6PPK5
Pfam PF13646 PF14538
Panther DB PTHR12848 PTHR12848:SF16
NCBI CDD -
KEGG Orthology K07204; regulatory associated protein of mTOR
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G08850 : HEAT repeat ;WD domain, G-beta repeat protein protein
RAP-DB (Rice) LOC_Os12g01922.1 : WD domain and HEAT domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a053670 , Zm00025a013185 , Zm00025a033288
Brachypodium PNT65577 , PNT65576
Barley -
Wheat TraesCS5B02G147900 , TraesCS5B02G147900 , TraesCS5B02G147900 , TraesCS5B02G147900 , TraesCS5B02G147900 , TraesCS5B02G147900 , TraesCS5D02G143600 , TraesCS5D02G143600 , TraesCS5D02G143600 , TraesCS5D02G143600 , TraesCS5A02G149200 , TraesCS5A02G149200 , TraesCS5A02G149200 , TraesCS5A02G149200 , TraesCS5A02G149200
Populus -


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cDNA sequences
Sobic.005G008800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G540400 expressed protein -
2 Sobic.003G408600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
3 Sobic.005G112300 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
4 Sobic.007G062800 SET domain containing protein, expressed -
5 Sobic.001G289600 BAH domain containing protein, putative, expressed -
6 Sobic.004G314000 expressed protein -
7 Sobic.008G009700 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR
8 Sobic.001G289800 BAH domain containing protein, putative, expressed -
9 Sobic.009G109200 phosphatidylinositol kinase, putative, expressed K07203: MTOR, FRAP, serine/threonine-protein kinase mTOR
10 Sobic.010G010700 PHD-finger family protein, expressed -
11 Sobic.002G309600 DNA-binding protein, putative, expressed K14326: UPF1, regulator of nonsense transcripts 1
12 Sobic.007G105100 STE_MEK_ste7_MAP2K.8 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K04368: MAP2K1, mitogen-activated protein kinase kinase 1
13 Sobic.001G241200 protein kinase domain containing protein, expressed -
14 Sobic.010G139000 surp module family protein, putative, expressed K13123: G patch domain-containing protein 1
15 Sobic.004G242400 nuclear-pore anchor, putative, expressed K09291: TPR, MLP1, nucleoprotein TPR
16 Sobic.010G105200 SYD, putative, expressed -
17 Sobic.004G034900 histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
18 Sobic.010G112100 transcription factor jumonji, putative, expressed K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
19 Sobic.002G134200 WD domain, G-beta repeat domain containing protein, expressed K11293: HIRA, protein HIRA/HIR1
20 Sobic.010G206900 transcription initiation factor TFIID subunit 1, putative, expressed K03125: transcription initiation factor TFIID subunit 1


Gene co-expression network
sample Sobic005G008800 Sobic005G008800 Sobic001G540400 Sobic001G540400 Sobic005G008800--Sobic001G540400 Sobic003G408600 Sobic003G408600 Sobic005G008800--Sobic003G408600 Sobic005G112300 Sobic005G112300 Sobic005G008800--Sobic005G112300 Sobic007G062800 Sobic007G062800 Sobic005G008800--Sobic007G062800 Sobic001G289600 Sobic001G289600 Sobic005G008800--Sobic001G289600 Sobic004G314000 Sobic004G314000 Sobic005G008800--Sobic004G314000 Sobic008G009700 Sobic008G009700 Sobic005G008800--Sobic008G009700 Sobic001G289800 Sobic001G289800 Sobic005G008800--Sobic001G289800 Sobic009G109200 Sobic009G109200 Sobic005G008800--Sobic009G109200 Sobic001G540400--Sobic001G289600 Sobic001G540400--Sobic003G408600 Sobic001G540400--Sobic007G062800 Sobic001G540400--Sobic005G008800 Sobic004G034900 Sobic004G034900 Sobic001G540400--Sobic004G034900 Sobic001G540400--Sobic005G112300 Sobic003G422500 Sobic003G422500 Sobic001G540400--Sobic003G422500 Sobic002G397500 Sobic002G397500 Sobic001G540400--Sobic002G397500 Sobic010G112100 Sobic010G112100 Sobic001G540400--Sobic010G112100 Sobic003G408600--Sobic001G540400 Sobic003G408600--Sobic005G008800 Sobic003G408600--Sobic002G397500 Sobic003G408600--Sobic005G112300 Sobic007G163100 Sobic007G163100 Sobic003G408600--Sobic007G163100 Sobic003G408600--Sobic010G112100 Sobic001G058700 Sobic001G058700 Sobic003G408600--Sobic001G058700 Sobic002G071500 Sobic002G071500 Sobic003G408600--Sobic002G071500 Sobic002G045600 Sobic002G045600 Sobic003G408600--Sobic002G045600 Sobic001G363500 Sobic001G363500 Sobic005G112300--Sobic001G363500 Sobic005G112300--Sobic007G062800 Sobic005G112300--Sobic010G112100 Sobic010G139000 Sobic010G139000 Sobic005G112300--Sobic010G139000 Sobic007G105100 Sobic007G105100 Sobic005G112300--Sobic007G105100 Sobic005G112300--Sobic001G540400 Sobic010G010700 Sobic010G010700 Sobic005G112300--Sobic010G010700 Sobic005G112300--Sobic005G008800 Sobic005G112300--Sobic002G071500 Sobic007G062800--Sobic001G540400 Sobic007G062800--Sobic005G112300 Sobic002G405800 Sobic002G405800 Sobic007G062800--Sobic002G405800 Sobic002G008900 Sobic002G008900 Sobic007G062800--Sobic002G008900 Sobic007G062800--Sobic010G010700 Sobic004G242400 Sobic004G242400 Sobic007G062800--Sobic004G242400 Sobic007G062800--Sobic004G034900 Sobic004G276400 Sobic004G276400 Sobic007G062800--Sobic004G276400 Sobic007G062800--Sobic002G397500 Sobic001G289600--Sobic001G540400 Sobic001G289600--Sobic004G034900 Sobic001G289600--Sobic001G289800 Sobic001G289600--Sobic003G422500 Sobic001G365900 Sobic001G365900 Sobic001G289600--Sobic001G365900 Sobic009G191000 Sobic009G191000 Sobic001G289600--Sobic009G191000 Sobic001G289600--Sobic005G008800 Sobic001G289600--Sobic007G105100 Sobic001G289600--Sobic010G010700 Sobic004G314000--Sobic010G139000 Sobic004G314000--Sobic005G008800 Sobic004G314000--Sobic005G112300 Sobic010G279450 Sobic010G279450 Sobic004G314000--Sobic010G279450 Sobic004G314000--Sobic004G242400 Sobic010G206900 Sobic010G206900 Sobic004G314000--Sobic010G206900 Sobic003G401600 Sobic003G401600 Sobic004G314000--Sobic003G401600 Sobic002G309600 Sobic002G309600 Sobic004G314000--Sobic002G309600 Sobic009G040600 Sobic009G040600 Sobic004G314000--Sobic009G040600 Sobic008G009700--Sobic002G309600 Sobic008G009700--Sobic005G008800 Sobic008G009700--Sobic005G112300 Sobic007G065400 Sobic007G065400 Sobic008G009700--Sobic007G065400 Sobic008G009700--Sobic002G071500 Sobic010G002100 Sobic010G002100 Sobic008G009700--Sobic010G002100 Sobic002G153700 Sobic002G153700 Sobic008G009700--Sobic002G153700 Sobic010G065300 Sobic010G065300 Sobic008G009700--Sobic010G065300 Sobic001G241200 Sobic001G241200 Sobic008G009700--Sobic001G241200 Sobic001G289800--Sobic001G289600 Sobic001G289800--Sobic003G422500 Sobic001G194200 Sobic001G194200 Sobic001G289800--Sobic001G194200 Sobic004G291900 Sobic004G291900 Sobic001G289800--Sobic004G291900 Sobic001G289800--Sobic004G034900 Sobic001G002000 Sobic001G002000 Sobic001G289800--Sobic001G002000 Sobic001G289800--Sobic010G010700 Sobic001G289800--Sobic007G062800 Sobic005G001000 Sobic005G001000 Sobic001G289800--Sobic005G001000 Sobic010G105200 Sobic010G105200 Sobic009G109200--Sobic010G105200 Sobic009G109200--Sobic004G242400 Sobic009G109200--Sobic002G397500 Sobic001G542400 Sobic001G542400 Sobic009G109200--Sobic001G542400 Sobic009G109200--Sobic001G540400 Sobic009G109200--Sobic005G008800 Sobic009G109200--Sobic004G276400 Sobic009G109200--Sobic003G408600 Sobic009G109200--Sobic010G112100
Octagon: transcription factors


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