Gene annotation
Transcriptome id Sobic.001G289800.1,Sobic.001G289800.2
Synonym Sb01g028395
Functional annotation BAH domain containing protein, putative, expressed
UniProt C5WRC3
Pfam PF01426 PF08711
Panther DB PTHR15141 PTHR15141:SF52
NCBI CDD KOG1886; BAH domain proteins
KEGG Orthology -
Gene Ontology GO:0003682; chromatin binding GO:0006351transcription, DNA-templated GO:0005634nucleus GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT3G48050 : BAH domain ;TFIIS helical bundle-like domain
RAP-DB (Rice) LOC_Os02g50840.2 : BAH domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a051830 , Zm00025a051831 , Zm00025a003481
Brachypodium KQK01972 , KQK01970 , KQK01971 , KQK01969 , KQK01968 , PNT69650 , KQK01967
Barley HORVU6Hr1G076220.1 , HORVU6Hr1G076220.3 , HORVU6Hr1G076220.2 , HORVU6Hr1G076220.5 , HORVU6Hr1G076220.4 , HORVU6Hr1G076220.7 , HORVU6Hr1G076220.6 , HORVU6Hr1G076220.8 , HORVU0Hr1G017170.1 , HORVU0Hr1G017170.6 , HORVU0Hr1G017170.7 , HORVU0Hr1G017170.4 , HORVU0Hr1G017170.5 , HORVU0Hr1G017170.2 , HORVU0Hr1G017170.3 , HORVU0Hr1G017170.8 , HORVU0Hr1G017170.9
Wheat TraesCS6B02G338200 , TraesCS6B02G338200 , TraesCS6B02G338200 , TraesCS6B02G338200 , TraesCS6D02G288400 , TraesCS6A02G309200 , TraesCS6A02G309200 , TraesCS6A02G309200 , TraesCS6B02G338100 , TraesCS6B02G338100 , TraesCS6B02G338100 , TraesCS6D02G288500 , TraesCS6D02G288500 , TraesCS6D02G288500 , TraesCS6D02G288500 , TraesCS6A02G309100 , TraesCS6A02G309100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G289600 BAH domain containing protein, putative, expressed -
2 Sobic.003G422500 expressed protein -
3 Sobic.001G194200 diacylglycerol kinase, putative, expressed -
4 Sobic.004G291900 ESP4, putative, expressed K06100: symplekin
5 Sobic.004G034900 histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
6 Sobic.001G002000 protein kinase domain containing protein, expressed -
7 Sobic.010G010700 PHD-finger family protein, expressed -
8 Sobic.007G062800 SET domain containing protein, expressed -
9 Sobic.005G001000 RNA recognition motif containing protein, putative, expressed K10643: CNOT4, NOT4, CCR4-NOT transcription complex subunit 4
10 Sobic.005G008800 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR
11 Sobic.004G276400 expressed protein K11320: E1A-binding protein p400
12 Sobic.001G540400 expressed protein -
13 Sobic.004G174200 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12813: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
14 Sobic.003G196300 DNA binding protein, putative, expressed -
15 Sobic.001G542500 1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
16 Sobic.009G256400 ATP binding protein, putative, expressed K15192: BTAF1, TATA-binding protein-associated factor
17 Sobic.009G191000 MATH domain containing protein, expressed -
18 Sobic.010G206900 transcription initiation factor TFIID subunit 1, putative, expressed K03125: transcription initiation factor TFIID subunit 1
19 Sobic.002G133300 ZOS9-20 - C2H2 zinc finger protein, expressed K14400: pre-mRNA cleavage complex 2 protein Pcf11
20 Sobic.007G105100 STE_MEK_ste7_MAP2K.8 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K04368: MAP2K1, mitogen-activated protein kinase kinase 1


Gene co-expression network
sample Sobic001G289800 Sobic001G289800 Sobic001G289600 Sobic001G289600 Sobic001G289800--Sobic001G289600 Sobic003G422500 Sobic003G422500 Sobic001G289800--Sobic003G422500 Sobic001G194200 Sobic001G194200 Sobic001G289800--Sobic001G194200 Sobic004G291900 Sobic004G291900 Sobic001G289800--Sobic004G291900 Sobic004G034900 Sobic004G034900 Sobic001G289800--Sobic004G034900 Sobic001G002000 Sobic001G002000 Sobic001G289800--Sobic001G002000 Sobic010G010700 Sobic010G010700 Sobic001G289800--Sobic010G010700 Sobic007G062800 Sobic007G062800 Sobic001G289800--Sobic007G062800 Sobic005G001000 Sobic005G001000 Sobic001G289800--Sobic005G001000 Sobic001G540400 Sobic001G540400 Sobic001G289600--Sobic001G540400 Sobic001G289600--Sobic004G034900 Sobic001G289600--Sobic001G289800 Sobic001G289600--Sobic003G422500 Sobic001G365900 Sobic001G365900 Sobic001G289600--Sobic001G365900 Sobic009G191000 Sobic009G191000 Sobic001G289600--Sobic009G191000 Sobic005G008800 Sobic005G008800 Sobic001G289600--Sobic005G008800 Sobic007G105100 Sobic007G105100 Sobic001G289600--Sobic007G105100 Sobic001G289600--Sobic010G010700 Sobic002G411600 Sobic002G411600 Sobic003G422500--Sobic002G411600 Sobic003G422500--Sobic009G191000 Sobic003G422500--Sobic001G289600 Sobic009G165700 Sobic009G165700 Sobic003G422500--Sobic009G165700 Sobic002G008900 Sobic002G008900 Sobic003G422500--Sobic002G008900 Sobic003G422500--Sobic004G034900 Sobic003G422500--Sobic001G289800 Sobic003G422500--Sobic001G540400 Sobic008G132600 Sobic008G132600 Sobic003G422500--Sobic008G132600 Sobic001G194200--Sobic004G291900 Sobic006G055200 Sobic006G055200 Sobic001G194200--Sobic006G055200 Sobic001G194200--Sobic005G001000 Sobic001G194200--Sobic010G010700 Sobic004G276400 Sobic004G276400 Sobic001G194200--Sobic004G276400 Sobic001G194200--Sobic001G289800 Sobic008G001200 Sobic008G001200 Sobic001G194200--Sobic008G001200 Sobic010G206900 Sobic010G206900 Sobic001G194200--Sobic010G206900 Sobic001G194200--Sobic004G034900 Sobic004G291900--Sobic001G194200 Sobic004G291900--Sobic001G289800 Sobic004G174200 Sobic004G174200 Sobic004G291900--Sobic004G174200 Sobic004G291900--Sobic004G276400 Sobic004G291900--Sobic005G001000 Sobic004G291900--Sobic004G034900 Sobic009G256400 Sobic009G256400 Sobic004G291900--Sobic009G256400 Sobic004G291900--Sobic001G002000 Sobic004G291900--Sobic010G010700 Sobic004G034900--Sobic001G289600 Sobic004G034900--Sobic010G206900 Sobic004G034900--Sobic010G010700 Sobic004G034900--Sobic002G411600 Sobic004G034900--Sobic001G540400 Sobic004G034900--Sobic003G422500 Sobic004G034900--Sobic004G276400 Sobic004G034900--Sobic002G008900 Sobic004G034900--Sobic007G062800 Sobic001G002000--Sobic001G194200 Sobic001G002000--Sobic001G289800 Sobic001G002000--Sobic004G291900 Sobic001G002000--Sobic003G422500 Sobic010G247800 Sobic010G247800 Sobic001G002000--Sobic010G247800 Sobic001G002000--Sobic010G010700 Sobic001G002000--Sobic004G034900 Sobic001G002000--Sobic001G289600 Sobic001G002000--Sobic002G411600 Sobic010G010700--Sobic010G206900 Sobic010G010700--Sobic004G034900 Sobic010G010700--Sobic004G276400 Sobic010G010700--Sobic001G194200 Sobic010G010700--Sobic007G062800 Sobic010G010700--Sobic002G008900 Sobic005G112300 Sobic005G112300 Sobic010G010700--Sobic005G112300 Sobic010G010700--Sobic008G001200 Sobic003G186000 Sobic003G186000 Sobic010G010700--Sobic003G186000 Sobic007G062800--Sobic001G540400 Sobic007G062800--Sobic005G112300 Sobic002G405800 Sobic002G405800 Sobic007G062800--Sobic002G405800 Sobic007G062800--Sobic002G008900 Sobic007G062800--Sobic010G010700 Sobic004G242400 Sobic004G242400 Sobic007G062800--Sobic004G242400 Sobic007G062800--Sobic004G034900 Sobic007G062800--Sobic004G276400 Sobic002G397500 Sobic002G397500 Sobic007G062800--Sobic002G397500 Sobic005G001000--Sobic001G194200 Sobic005G001000--Sobic002G008900 Sobic001G370900 Sobic001G370900 Sobic005G001000--Sobic001G370900 Sobic003G205200 Sobic003G205200 Sobic005G001000--Sobic003G205200 Sobic005G001000--Sobic004G291900 Sobic005G001000--Sobic003G186000 Sobic005G001000--Sobic008G001200 Sobic005G001000--Sobic003G422500 Sobic005G001000--Sobic009G256400
Octagon: transcription factors


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