Gene annotation
Transcriptome id Sobic.001G542500.2
Synonym GSL08, ATGSL08, GSL8, Sb01g050480, ATGSL8, CHOR
Functional annotation 1,3-beta-glucan synthase component domain containing protein, expressed
UniProt A0A1B6QR98
Pfam PF14288 PF02364
Panther DB PTHR12741 PTHR12741:SF5
NCBI CDD -
KEGG Orthology K11000; callose synthase
Gene Ontology GO:0016020; membrane GO:0006075(1->3)-beta-D-glucan biosynthetic process GO:00038431,3-beta-D-glucan synthase activity GO:00001481,3-beta-D-glucan synthase complex


Orthologs (automatic annotation)
TAIR AT2G36850 : glucan synthase-like 8
RAP-DB (Rice) LOC_Os06g08380.1 : 1,3-beta-glucan synthase component domain containing protein, expressed
MaizeGDB (Corn) Zm00025a003717
Brachypodium KQK19996
Barley HORVU7Hr1G003460.14 , HORVU7Hr1G003460.16 , HORVU7Hr1G003460.18 , HORVU7Hr1G003460.19 , HORVU7Hr1G003460.15 , HORVU7Hr1G003460.17 , HORVU7Hr1G003460.10 , HORVU7Hr1G003460.11 , HORVU7Hr1G003460.12 , HORVU7Hr1G003460.13 , HORVU7Hr1G003460.21 , HORVU7Hr1G003460.20 , HORVU7Hr1G003460.23 , HORVU7Hr1G003460.22 , HORVU7Hr1G003460.25 , HORVU7Hr1G003460.24 , HORVU7Hr1G003460.27 , HORVU7Hr1G003460.26 , HORVU7Hr1G003460.29 , HORVU7Hr1G003460.28 , HORVU7Hr1G003460.6 , HORVU7Hr1G003460.7 , HORVU7Hr1G003460.4 , HORVU7Hr1G003460.5 , HORVU7Hr1G003460.2 , HORVU7Hr1G003460.3 , HORVU7Hr1G003460.1 , HORVU7Hr1G003460.8 , HORVU7Hr1G003460.9
Wheat TraesCS7A02G030500 , TraesCS4A02G459300 , TraesCS7D02G026700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G291900 ESP4, putative, expressed K06100: symplekin
2 Sobic.001G289800 BAH domain containing protein, putative, expressed -
3 Sobic.008G085300 hhH-GPD superfamily base excision DNA repair protein, expressed -
4 Sobic.004G276400 expressed protein K11320: E1A-binding protein p400
5 Sobic.008G098900 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
6 Sobic.003G196300 DNA binding protein, putative, expressed -
7 Sobic.001G117200 AGC_AGC_other_GWLd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
8 Sobic.009G109200 phosphatidylinositol kinase, putative, expressed K07203: MTOR, FRAP, serine/threonine-protein kinase mTOR
9 Sobic.004G174200 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12813: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
10 Sobic.002G397500 SAC3/GANP family protein, expressed -
11 Sobic.004G034900 histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
12 Sobic.001G370900 expressed protein K11665: INO80, DNA helicase INO80
13 Sobic.010G105200 SYD, putative, expressed -
14 Sobic.003G166750 - K15188: cyclin T
15 Sobic.004G023100 protein binding protein, putative, expressed -
16 Sobic.003G186000 WD domain, G-beta repeat domain containing protein, expressed -
17 Sobic.007G103100 SWP, putative, expressed K15156: MED14, mediator of RNA polymerase II transcription subunit 14
18 Sobic.002G316600 expressed protein -
19 Sobic.004G242400 nuclear-pore anchor, putative, expressed K09291: TPR, MLP1, nucleoprotein TPR
20 Sobic.001G529600 1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase


Gene co-expression network
sample Sobic001G542500 Sobic001G542500 Sobic004G291900 Sobic004G291900 Sobic001G542500--Sobic004G291900 Sobic001G289800 Sobic001G289800 Sobic001G542500--Sobic001G289800 Sobic008G085300 Sobic008G085300 Sobic001G542500--Sobic008G085300 Sobic004G276400 Sobic004G276400 Sobic001G542500--Sobic004G276400 Sobic008G098900 Sobic008G098900 Sobic001G542500--Sobic008G098900 Sobic003G196300 Sobic003G196300 Sobic001G542500--Sobic003G196300 Sobic001G117200 Sobic001G117200 Sobic001G542500--Sobic001G117200 Sobic009G109200 Sobic009G109200 Sobic001G542500--Sobic009G109200 Sobic004G174200 Sobic004G174200 Sobic001G542500--Sobic004G174200 Sobic001G194200 Sobic001G194200 Sobic004G291900--Sobic001G194200 Sobic004G291900--Sobic001G289800 Sobic004G291900--Sobic004G174200 Sobic004G291900--Sobic004G276400 Sobic005G001000 Sobic005G001000 Sobic004G291900--Sobic005G001000 Sobic004G034900 Sobic004G034900 Sobic004G291900--Sobic004G034900 Sobic009G256400 Sobic009G256400 Sobic004G291900--Sobic009G256400 Sobic001G002000 Sobic001G002000 Sobic004G291900--Sobic001G002000 Sobic010G010700 Sobic010G010700 Sobic004G291900--Sobic010G010700 Sobic001G289600 Sobic001G289600 Sobic001G289800--Sobic001G289600 Sobic003G422500 Sobic003G422500 Sobic001G289800--Sobic003G422500 Sobic001G289800--Sobic001G194200 Sobic001G289800--Sobic004G291900 Sobic001G289800--Sobic004G034900 Sobic001G289800--Sobic001G002000 Sobic001G289800--Sobic010G010700 Sobic007G062800 Sobic007G062800 Sobic001G289800--Sobic007G062800 Sobic001G289800--Sobic005G001000 Sobic008G085300--Sobic008G098900 Sobic008G085300--Sobic001G542500 Sobic005G162500 Sobic005G162500 Sobic008G085300--Sobic005G162500 Sobic008G085300--Sobic004G276400 Sobic008G092600 Sobic008G092600 Sobic008G085300--Sobic008G092600 Sobic002G147600 Sobic002G147600 Sobic008G085300--Sobic002G147600 Sobic003G186000 Sobic003G186000 Sobic008G085300--Sobic003G186000 Sobic001G370900 Sobic001G370900 Sobic008G085300--Sobic001G370900 Sobic008G085300--Sobic004G291900 Sobic004G276400--Sobic003G186000 Sobic004G276400--Sobic010G010700 Sobic010G105200 Sobic010G105200 Sobic004G276400--Sobic010G105200 Sobic004G276400--Sobic001G194200 Sobic004G276400--Sobic004G034900 Sobic004G276400--Sobic007G062800 Sobic004G276400--Sobic004G291900 Sobic004G242400 Sobic004G242400 Sobic004G276400--Sobic004G242400 Sobic008G001200 Sobic008G001200 Sobic004G276400--Sobic008G001200 Sobic008G098900--Sobic001G370900 Sobic008G098900--Sobic008G085300 Sobic008G098900--Sobic001G117200 Sobic003G205200 Sobic003G205200 Sobic008G098900--Sobic003G205200 Sobic008G098900--Sobic005G001000 Sobic003G072200 Sobic003G072200 Sobic008G098900--Sobic003G072200 Sobic008G098900--Sobic005G162500 Sobic002G042600 Sobic002G042600 Sobic008G098900--Sobic002G042600 Sobic008G098900--Sobic004G276400 Sobic010G206900 Sobic010G206900 Sobic003G196300--Sobic010G206900 Sobic003G196300--Sobic004G034900 Sobic003G196300--Sobic001G194200 Sobic007G063000 Sobic007G063000 Sobic003G196300--Sobic007G063000 Sobic003G196300--Sobic001G289800 Sobic003G196300--Sobic004G276400 Sobic010G247800 Sobic010G247800 Sobic003G196300--Sobic010G247800 Sobic009G256300 Sobic009G256300 Sobic003G196300--Sobic009G256300 Sobic001G534700 Sobic001G534700 Sobic003G196300--Sobic001G534700 Sobic001G117200--Sobic008G098900 Sobic003G408600 Sobic003G408600 Sobic001G117200--Sobic003G408600 Sobic002G430000 Sobic002G430000 Sobic001G117200--Sobic002G430000 Sobic001G540400 Sobic001G540400 Sobic001G117200--Sobic001G540400 Sobic001G137000 Sobic001G137000 Sobic001G117200--Sobic001G137000 Sobic004G113400 Sobic004G113400 Sobic001G117200--Sobic004G113400 Sobic001G117200--Sobic001G542500 Sobic001G058700 Sobic001G058700 Sobic001G117200--Sobic001G058700 Sobic001G117200--Sobic008G092600 Sobic009G109200--Sobic010G105200 Sobic009G109200--Sobic004G242400 Sobic002G397500 Sobic002G397500 Sobic009G109200--Sobic002G397500 Sobic001G542400 Sobic001G542400 Sobic009G109200--Sobic001G542400 Sobic009G109200--Sobic001G540400 Sobic005G008800 Sobic005G008800 Sobic009G109200--Sobic005G008800 Sobic009G109200--Sobic004G276400 Sobic009G109200--Sobic003G408600 Sobic010G112100 Sobic010G112100 Sobic009G109200--Sobic010G112100 Sobic004G174200--Sobic004G291900 Sobic002G411600 Sobic002G411600 Sobic004G174200--Sobic002G411600 Sobic004G174200--Sobic008G001200 Sobic004G174200--Sobic010G206900 Sobic002G008900 Sobic002G008900 Sobic004G174200--Sobic002G008900 Sobic004G174200--Sobic001G289800 Sobic004G174200--Sobic005G001000 Sobic004G174200--Sobic003G422500 Sobic004G174200--Sobic001G194200
Octagon: transcription factors


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