Gene annotation
Transcriptome id Sobic.001G117200.2
Synonym Sb01g010330
Functional annotation AGC_AGC_other_GWLd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed
UniProt A0A1Z5S598
Pfam PF07714
Panther DB PTHR24356 PTHR24356:SF144
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G17850 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os03g50390.1 : AGC_AGC_other_GWLd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed
MaizeGDB (Corn) Zm00025a016984 , Zm00025a007834
Brachypodium KQK13619 , PNT74256
Barley HORVU4Hr1G007540.2 , HORVU4Hr1G007540.3 , HORVU4Hr1G007540.1 , HORVU4Hr1G007540.6 , HORVU4Hr1G007540.7 , HORVU4Hr1G007540.4 , HORVU4Hr1G007540.5 , HORVU4Hr1G007540.8 , HORVU4Hr1G007540.9 , HORVU4Hr1G007540.10
Wheat TraesCS4A02G267800 , TraesCS4A02G267800 , TraesCS4A02G267800 , TraesCS4D02G045500 , TraesCS4D02G045500 , TraesCS4D02G045500 , TraesCS4B02G046600 , TraesCS4B02G046600 , TraesCS4B02G046600 , TraesCS4B02G046600 , TraesCS4B02G046600
Populus -


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cDNA sequences
Sobic.001G117200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G098900 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
2 Sobic.003G408600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
3 Sobic.002G430000 expressed protein K08518: STXBP5, syntaxin-binding protein 5
4 Sobic.001G540400 expressed protein -
5 Sobic.001G137000 aberrant pollen transmission 1, putative, expressed -
6 Sobic.004G113400 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant
7 Sobic.001G542500 1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
8 Sobic.001G058700 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
9 Sobic.008G092600 ubiquitin-protein ligase 1, putative, expressed K10592: HUWE1, MULE, E3 ubiquitin-protein ligase HUWE1
10 Sobic.007G163100 expressed protein K14972: PAXIP1, PAX-interacting protein 1
11 Sobic.002G397500 SAC3/GANP family protein, expressed -
12 Sobic.003G422500 expressed protein -
13 Sobic.004G004300 expressed protein -
14 Sobic.009G109200 phosphatidylinositol kinase, putative, expressed K07203: MTOR, FRAP, serine/threonine-protein kinase mTOR
15 Sobic.008G087866 - -
16 Sobic.001G037100 expressed protein K19026: spatacsin
17 Sobic.003G205200 expressed protein K19027: zinc finger FYVE domain-containing protein 26
18 Sobic.001G457900 expressed protein -
19 Sobic.007G098500 BIG, putative, expressed K10691: UBR4, E3 ubiquitin-protein ligase UBR4
20 Sobic.010G139600 STE_PAK_Ste20_STLK.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39


Gene co-expression network
sample Sobic001G117200 Sobic001G117200 Sobic008G098900 Sobic008G098900 Sobic001G117200--Sobic008G098900 Sobic003G408600 Sobic003G408600 Sobic001G117200--Sobic003G408600 Sobic002G430000 Sobic002G430000 Sobic001G117200--Sobic002G430000 Sobic001G540400 Sobic001G540400 Sobic001G117200--Sobic001G540400 Sobic001G137000 Sobic001G137000 Sobic001G117200--Sobic001G137000 Sobic004G113400 Sobic004G113400 Sobic001G117200--Sobic004G113400 Sobic001G542500 Sobic001G542500 Sobic001G117200--Sobic001G542500 Sobic001G058700 Sobic001G058700 Sobic001G117200--Sobic001G058700 Sobic008G092600 Sobic008G092600 Sobic001G117200--Sobic008G092600 Sobic001G370900 Sobic001G370900 Sobic008G098900--Sobic001G370900 Sobic008G085300 Sobic008G085300 Sobic008G098900--Sobic008G085300 Sobic008G098900--Sobic001G117200 Sobic003G205200 Sobic003G205200 Sobic008G098900--Sobic003G205200 Sobic005G001000 Sobic005G001000 Sobic008G098900--Sobic005G001000 Sobic003G072200 Sobic003G072200 Sobic008G098900--Sobic003G072200 Sobic005G162500 Sobic005G162500 Sobic008G098900--Sobic005G162500 Sobic002G042600 Sobic002G042600 Sobic008G098900--Sobic002G042600 Sobic004G276400 Sobic004G276400 Sobic008G098900--Sobic004G276400 Sobic003G408600--Sobic001G540400 Sobic005G008800 Sobic005G008800 Sobic003G408600--Sobic005G008800 Sobic002G397500 Sobic002G397500 Sobic003G408600--Sobic002G397500 Sobic005G112300 Sobic005G112300 Sobic003G408600--Sobic005G112300 Sobic007G163100 Sobic007G163100 Sobic003G408600--Sobic007G163100 Sobic010G112100 Sobic010G112100 Sobic003G408600--Sobic010G112100 Sobic003G408600--Sobic001G058700 Sobic002G071500 Sobic002G071500 Sobic003G408600--Sobic002G071500 Sobic002G045600 Sobic002G045600 Sobic003G408600--Sobic002G045600 Sobic001G207400 Sobic001G207400 Sobic002G430000--Sobic001G207400 Sobic002G430000--Sobic001G117200 Sobic004G355000 Sobic004G355000 Sobic002G430000--Sobic004G355000 Sobic002G430000--Sobic008G098900 Sobic001G016700 Sobic001G016700 Sobic002G430000--Sobic001G016700 Sobic002G430000--Sobic004G113400 Sobic010G139600 Sobic010G139600 Sobic002G430000--Sobic010G139600 Sobic002G430000--Sobic008G092600 Sobic003G110000 Sobic003G110000 Sobic002G430000--Sobic003G110000 Sobic001G289600 Sobic001G289600 Sobic001G540400--Sobic001G289600 Sobic001G540400--Sobic003G408600 Sobic007G062800 Sobic007G062800 Sobic001G540400--Sobic007G062800 Sobic001G540400--Sobic005G008800 Sobic004G034900 Sobic004G034900 Sobic001G540400--Sobic004G034900 Sobic001G540400--Sobic005G112300 Sobic003G422500 Sobic003G422500 Sobic001G540400--Sobic003G422500 Sobic001G540400--Sobic002G397500 Sobic001G540400--Sobic010G112100 Sobic001G137000--Sobic008G092600 Sobic007G098500 Sobic007G098500 Sobic001G137000--Sobic007G098500 Sobic003G233400 Sobic003G233400 Sobic001G137000--Sobic003G233400 Sobic003G312100 Sobic003G312100 Sobic001G137000--Sobic003G312100 Sobic001G137000--Sobic001G117200 Sobic002G396500 Sobic002G396500 Sobic001G137000--Sobic002G396500 Sobic001G050600 Sobic001G050600 Sobic001G137000--Sobic001G050600 Sobic001G137000--Sobic008G098900 Sobic008G099800 Sobic008G099800 Sobic001G137000--Sobic008G099800 Sobic009G010600 Sobic009G010600 Sobic004G113400--Sobic009G010600 Sobic004G113400--Sobic003G408600 Sobic004G329400 Sobic004G329400 Sobic004G113400--Sobic004G329400 Sobic004G113400--Sobic001G058700 Sobic004G113400--Sobic008G099800 Sobic001G178700 Sobic001G178700 Sobic004G113400--Sobic001G178700 Sobic004G113400--Sobic001G117200 Sobic001G534800 Sobic001G534800 Sobic004G113400--Sobic001G534800 Sobic004G113400--Sobic002G430000 Sobic004G291900 Sobic004G291900 Sobic001G542500--Sobic004G291900 Sobic001G289800 Sobic001G289800 Sobic001G542500--Sobic001G289800 Sobic001G542500--Sobic008G085300 Sobic001G542500--Sobic004G276400 Sobic001G542500--Sobic008G098900 Sobic003G196300 Sobic003G196300 Sobic001G542500--Sobic003G196300 Sobic001G542500--Sobic001G117200 Sobic009G109200 Sobic009G109200 Sobic001G542500--Sobic009G109200 Sobic004G174200 Sobic004G174200 Sobic001G542500--Sobic004G174200 Sobic001G058700--Sobic003G408600 Sobic007G172400 Sobic007G172400 Sobic001G058700--Sobic007G172400 Sobic001G058700--Sobic001G050600 Sobic001G058700--Sobic007G062800 Sobic001G058700--Sobic001G540400 Sobic001G058700--Sobic005G008800 Sobic004G347400 Sobic004G347400 Sobic001G058700--Sobic004G347400 Sobic005G028600 Sobic005G028600 Sobic001G058700--Sobic005G028600 Sobic001G219900 Sobic001G219900 Sobic001G058700--Sobic001G219900 Sobic008G092600--Sobic007G098500 Sobic002G147600 Sobic002G147600 Sobic008G092600--Sobic002G147600 Sobic008G092600--Sobic001G137000 Sobic004G040500 Sobic004G040500 Sobic008G092600--Sobic004G040500 Sobic008G092600--Sobic003G072200 Sobic008G092600--Sobic008G098900 Sobic008G092600--Sobic008G085300 Sobic008G092600--Sobic003G233400 Sobic008G092600--Sobic001G117200
Octagon: transcription factors


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