Gene annotation
Transcriptome id Sobic.004G004300.1
Synonym Sb04g000570
Functional annotation expressed protein
UniProt C5XRJ2
Pfam PF12932 PF12931
Panther DB PTHR13402 PTHR13402:SF12
NCBI CDD KOG1913; Regucalcin gene promoter region-related protein (RGPR)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G47490 : RGPR-related
RAP-DB (Rice) LOC_Os02g01490.1 : expressed protein
MaizeGDB (Corn) Zm00025a035084 , Zm00025a041165 , Zm00025a018643
Brachypodium KQJ92800
Barley HORVU6Hr1G003500.8 , HORVU6Hr1G003500.1 , HORVU6Hr1G003500.2 , HORVU6Hr1G003500.3 , HORVU6Hr1G003500.4 , HORVU6Hr1G003500.5 , HORVU6Hr1G003500.6 , HORVU6Hr1G003500.7 , HORVU7Hr1G001370.1 , HORVU7Hr1G001370.2 , HORVU7Hr1G001370.3 , HORVU7Hr1G001370.5 , HORVU7Hr1G001370.6 , HORVU7Hr1G001370.7
Wheat TraesCS6D02G022300 , TraesCS7A02G015000 , TraesCS7A02G015000 , TraesCS7D02G012000 , TraesCS7D02G012000 , TraesCS4A02G481400 , TraesCS6A02G019400 , TraesCS6B02G026100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G281100 START domain containing protein, expressed -
2 Sobic.005G026200 HEAT repeat family protein, putative, expressed K11886: proteasome component ECM29
3 Sobic.001G534800 Putative ortholog gene associated with awn presence/absence in wheat(PubMedID : 25237112)@adapitin protein, putative, expressed K11824: AP-2 complex subunit alpha
4 Sobic.006G126100 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
5 Sobic.001G117200 AGC_AGC_other_GWLd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
6 Sobic.004G004200 expressed protein -
7 Sobic.001G415300 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
8 Sobic.010G275500 EF hand family protein, putative, expressed -
9 Sobic.005G003300 clathrin heavy chain, putative, expressed K04646: clathrin heavy chain
10 Sobic.001G347500 expressed protein -
11 Sobic.004G358400 callose synthase-like enzyme(PubMedID : 25311645)@1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
12 Sobic.004G269200 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
13 Sobic.001G542500 1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
14 Sobic.006G280000 transportin-2, putative, expressed K18752: TNPO1, IPO2, transportin-1
15 Sobic.001G251200 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
16 Sobic.003G422500 expressed protein -
17 Sobic.002G397500 SAC3/GANP family protein, expressed -
18 Sobic.003G337300 HEAT repeat family protein, putative, expressed K08876: SCY1-like protein 1
19 Sobic.008G098900 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
20 Sobic.004G344901 - K10357: myosin V


Gene co-expression network
sample Sobic004G004300 Sobic004G004300 Sobic001G281100 Sobic001G281100 Sobic004G004300--Sobic001G281100 Sobic005G026200 Sobic005G026200 Sobic004G004300--Sobic005G026200 Sobic001G534800 Sobic001G534800 Sobic004G004300--Sobic001G534800 Sobic006G126100 Sobic006G126100 Sobic004G004300--Sobic006G126100 Sobic001G117200 Sobic001G117200 Sobic004G004300--Sobic001G117200 Sobic004G004200 Sobic004G004200 Sobic004G004300--Sobic004G004200 Sobic001G415300 Sobic001G415300 Sobic004G004300--Sobic001G415300 Sobic010G275500 Sobic010G275500 Sobic004G004300--Sobic010G275500 Sobic005G003300 Sobic005G003300 Sobic004G004300--Sobic005G003300 Sobic001G281100--Sobic001G534800 Sobic001G281100--Sobic004G004300 Sobic001G065000 Sobic001G065000 Sobic001G281100--Sobic001G065000 Sobic001G281100--Sobic005G026200 Sobic008G099800 Sobic008G099800 Sobic001G281100--Sobic008G099800 Sobic003G229500 Sobic003G229500 Sobic001G281100--Sobic003G229500 Sobic006G012500 Sobic006G012500 Sobic001G281100--Sobic006G012500 Sobic004G072100 Sobic004G072100 Sobic001G281100--Sobic004G072100 Sobic001G281100--Sobic010G275500 Sobic005G026200--Sobic004G004300 Sobic005G026200--Sobic001G534800 Sobic005G026200--Sobic001G281100 Sobic005G026200--Sobic005G003300 Sobic002G397500 Sobic002G397500 Sobic005G026200--Sobic002G397500 Sobic010G053800 Sobic010G053800 Sobic005G026200--Sobic010G053800 Sobic003G072200 Sobic003G072200 Sobic005G026200--Sobic003G072200 Sobic005G026200--Sobic001G065000 Sobic004G113400 Sobic004G113400 Sobic005G026200--Sobic004G113400 Sobic001G534800--Sobic001G281100 Sobic001G534800--Sobic008G099800 Sobic001G534800--Sobic004G004300 Sobic004G135400 Sobic004G135400 Sobic001G534800--Sobic004G135400 Sobic001G534800--Sobic005G003300 Sobic001G534800--Sobic005G026200 Sobic001G534800--Sobic006G012500 Sobic001G534800--Sobic004G113400 Sobic001G534800--Sobic001G065000 Sobic006G126100--Sobic004G004300 Sobic008G004600 Sobic008G004600 Sobic006G126100--Sobic008G004600 Sobic004G039600 Sobic004G039600 Sobic006G126100--Sobic004G039600 Sobic006G126100--Sobic001G534800 Sobic003G104000 Sobic003G104000 Sobic006G126100--Sobic003G104000 Sobic006G126100--Sobic006G012500 Sobic006G126100--Sobic004G135400 Sobic007G132100 Sobic007G132100 Sobic006G126100--Sobic007G132100 Sobic006G208500 Sobic006G208500 Sobic006G126100--Sobic006G208500 Sobic008G098900 Sobic008G098900 Sobic001G117200--Sobic008G098900 Sobic003G408600 Sobic003G408600 Sobic001G117200--Sobic003G408600 Sobic002G430000 Sobic002G430000 Sobic001G117200--Sobic002G430000 Sobic001G540400 Sobic001G540400 Sobic001G117200--Sobic001G540400 Sobic001G137000 Sobic001G137000 Sobic001G117200--Sobic001G137000 Sobic001G117200--Sobic004G113400 Sobic001G542500 Sobic001G542500 Sobic001G117200--Sobic001G542500 Sobic001G058700 Sobic001G058700 Sobic001G117200--Sobic001G058700 Sobic008G092600 Sobic008G092600 Sobic001G117200--Sobic008G092600 Sobic004G004200--Sobic004G004300 Sobic004G004200--Sobic001G281100 Sobic004G004200--Sobic002G430000 Sobic004G269200 Sobic004G269200 Sobic004G004200--Sobic004G269200 Sobic001G101100 Sobic001G101100 Sobic004G004200--Sobic001G101100 Sobic001G251200 Sobic001G251200 Sobic004G004200--Sobic001G251200 Sobic004G261600 Sobic004G261600 Sobic004G004200--Sobic004G261600 Sobic002G270500 Sobic002G270500 Sobic004G004200--Sobic002G270500 Sobic003G126300 Sobic003G126300 Sobic004G004200--Sobic003G126300 Sobic002G137400 Sobic002G137400 Sobic001G415300--Sobic002G137400 Sobic001G415300--Sobic004G004300 Sobic001G415300--Sobic001G281100 Sobic001G085300 Sobic001G085300 Sobic001G415300--Sobic001G085300 Sobic003G337300 Sobic003G337300 Sobic001G415300--Sobic003G337300 Sobic001G415300--Sobic006G126100 Sobic001G415300--Sobic001G534800 Sobic004G002100 Sobic004G002100 Sobic001G415300--Sobic004G002100 Sobic001G457900 Sobic001G457900 Sobic001G415300--Sobic001G457900 Sobic010G275500--Sobic010G053800 Sobic010G275500--Sobic004G072100 Sobic010G275500--Sobic006G012500 Sobic001G155000 Sobic001G155000 Sobic010G275500--Sobic001G155000 Sobic010G116600 Sobic010G116600 Sobic010G275500--Sobic010G116600 Sobic010G069100 Sobic010G069100 Sobic010G275500--Sobic010G069100 Sobic009G119000 Sobic009G119000 Sobic010G275500--Sobic009G119000 Sobic007G183900 Sobic007G183900 Sobic010G275500--Sobic007G183900 Sobic010G275500--Sobic002G397500 Sobic005G003300--Sobic001G534800 Sobic005G003300--Sobic005G026200 Sobic005G003300--Sobic004G135400 Sobic005G003300--Sobic004G004300 Sobic005G003300--Sobic008G004600 Sobic005G003300--Sobic006G126100 Sobic008G003700 Sobic008G003700 Sobic005G003300--Sobic008G003700 Sobic005G003300--Sobic008G099800 Sobic005G003300--Sobic004G039600
Octagon: transcription factors


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