Gene annotation
Transcriptome id Sobic.001G347500.2,Sobic.001G347500.1
Synonym Sb01g033300
Functional annotation expressed protein
UniProt A0A1Z5S9R2 , A0A1Z5S950
Pfam -
Panther DB PTHR32093 PTHR32093:SF17
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G50370 : -
RAP-DB (Rice) LOC_Os03g27820.1 : expressed protein
MaizeGDB (Corn) Zm00025a002757
Brachypodium KQK21390 , KQK21391
Barley HORVU4Hr1G035180.3 , HORVU4Hr1G035180.2 , HORVU4Hr1G035180.4 , HORVU4Hr1G035180.1
Wheat TraesCS4D02G166400 , TraesCS4D02G166400 , TraesCS4D02G166400 , TraesCS4A02G158900 , TraesCS4A02G158900 , TraesCS4A02G158900 , TraesCS4B02G166300 , TraesCS4B02G166300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G072200 zinc finger protein, putative, expressed K11978: E3 ubiquitin-protein ligase UBR3
2 Sobic.008G099800 expressed protein -
3 Sobic.003G229500 ZOS12-01 - C2H2 zinc finger protein, expressed -
4 Sobic.009G084900 expressed protein -
5 Sobic.001G273700 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
6 Sobic.001G534800 Putative ortholog gene associated with awn presence/absence in wheat(PubMedID : 25237112)@adapitin protein, putative, expressed K11824: AP-2 complex subunit alpha
7 Sobic.006G012500 protein transport protein Sec24-like, putative, expressed K14007: protein transport protein SEC24
8 Sobic.010G275500 EF hand family protein, putative, expressed -
9 Sobic.007G098500 BIG, putative, expressed K10691: UBR4, E3 ubiquitin-protein ligase UBR4
10 Sobic.008G092600 ubiquitin-protein ligase 1, putative, expressed K10592: HUWE1, MULE, E3 ubiquitin-protein ligase HUWE1
11 Sobic.001G287500 heat shock protein DnaJ, putative, expressed K09533: DnaJ homolog subfamily C member 13
12 Sobic.004G072100 centromere/kinetochore protein zw10, putative, expressed K11578: ZW10, protein transport protein DSL1/ZW10
13 Sobic.001G065000 expressed protein -
14 Sobic.004G004300 expressed protein -
15 Sobic.002G397500 SAC3/GANP family protein, expressed -
16 Sobic.001G050600 expressed protein -
17 Sobic.004G051200 WD domain containing protein, putative, expressed -
18 Sobic.003G233400 expressed protein -
19 Sobic.001G457900 expressed protein -
20 Sobic.003G408600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein


Gene co-expression network
sample Sobic001G347500 Sobic001G347500 Sobic003G072200 Sobic003G072200 Sobic001G347500--Sobic003G072200 Sobic008G099800 Sobic008G099800 Sobic001G347500--Sobic008G099800 Sobic003G229500 Sobic003G229500 Sobic001G347500--Sobic003G229500 Sobic009G084900 Sobic009G084900 Sobic001G347500--Sobic009G084900 Sobic001G273700 Sobic001G273700 Sobic001G347500--Sobic001G273700 Sobic001G534800 Sobic001G534800 Sobic001G347500--Sobic001G534800 Sobic006G012500 Sobic006G012500 Sobic001G347500--Sobic006G012500 Sobic010G275500 Sobic010G275500 Sobic001G347500--Sobic010G275500 Sobic007G098500 Sobic007G098500 Sobic001G347500--Sobic007G098500 Sobic002G397500 Sobic002G397500 Sobic003G072200--Sobic002G397500 Sobic003G072200--Sobic007G098500 Sobic007G062800 Sobic007G062800 Sobic003G072200--Sobic007G062800 Sobic003G233400 Sobic003G233400 Sobic003G072200--Sobic003G233400 Sobic003G072200--Sobic009G084900 Sobic008G098900 Sobic008G098900 Sobic003G072200--Sobic008G098900 Sobic005G112300 Sobic005G112300 Sobic003G072200--Sobic005G112300 Sobic003G072200--Sobic001G347500 Sobic002G133300 Sobic002G133300 Sobic003G072200--Sobic002G133300 Sobic008G099800--Sobic006G012500 Sobic008G099800--Sobic001G534800 Sobic004G135400 Sobic004G135400 Sobic008G099800--Sobic004G135400 Sobic008G099800--Sobic001G347500 Sobic001G281100 Sobic001G281100 Sobic008G099800--Sobic001G281100 Sobic004G113400 Sobic004G113400 Sobic008G099800--Sobic004G113400 Sobic004G039600 Sobic004G039600 Sobic008G099800--Sobic004G039600 Sobic008G099800--Sobic003G072200 Sobic001G065000 Sobic001G065000 Sobic008G099800--Sobic001G065000 Sobic008G132600 Sobic008G132600 Sobic003G229500--Sobic008G132600 Sobic003G229500--Sobic007G062800 Sobic003G101400 Sobic003G101400 Sobic003G229500--Sobic003G101400 Sobic001G196500 Sobic001G196500 Sobic003G229500--Sobic001G196500 Sobic002G042600 Sobic002G042600 Sobic003G229500--Sobic002G042600 Sobic001G363500 Sobic001G363500 Sobic003G229500--Sobic001G363500 Sobic003G229500--Sobic001G347500 Sobic003G229500--Sobic003G072200 Sobic001G540400 Sobic001G540400 Sobic003G229500--Sobic001G540400 Sobic010G059500 Sobic010G059500 Sobic009G084900--Sobic010G059500 Sobic009G084900--Sobic003G072200 Sobic001G493200 Sobic001G493200 Sobic009G084900--Sobic001G493200 Sobic001G433800 Sobic001G433800 Sobic009G084900--Sobic001G433800 Sobic009G131300 Sobic009G131300 Sobic009G084900--Sobic009G131300 Sobic009G084900--Sobic002G133300 Sobic006G077200 Sobic006G077200 Sobic009G084900--Sobic006G077200 Sobic008G082500 Sobic008G082500 Sobic009G084900--Sobic008G082500 Sobic004G260100 Sobic004G260100 Sobic009G084900--Sobic004G260100 Sobic007G172200 Sobic007G172200 Sobic001G273700--Sobic007G172200 Sobic001G263600 Sobic001G263600 Sobic001G273700--Sobic001G263600 Sobic001G273700--Sobic008G099800 Sobic001G273700--Sobic001G347500 Sobic007G133700 Sobic007G133700 Sobic001G273700--Sobic007G133700 Sobic007G163100 Sobic007G163100 Sobic001G273700--Sobic007G163100 Sobic001G457900 Sobic001G457900 Sobic001G273700--Sobic001G457900 Sobic001G313700 Sobic001G313700 Sobic001G273700--Sobic001G313700 Sobic001G273700--Sobic002G042600 Sobic001G534800--Sobic001G281100 Sobic001G534800--Sobic008G099800 Sobic004G004300 Sobic004G004300 Sobic001G534800--Sobic004G004300 Sobic001G534800--Sobic004G135400 Sobic005G003300 Sobic005G003300 Sobic001G534800--Sobic005G003300 Sobic005G026200 Sobic005G026200 Sobic001G534800--Sobic005G026200 Sobic001G534800--Sobic006G012500 Sobic001G534800--Sobic004G113400 Sobic001G534800--Sobic001G065000 Sobic006G012500--Sobic004G039600 Sobic010G053800 Sobic010G053800 Sobic006G012500--Sobic010G053800 Sobic006G012500--Sobic008G099800 Sobic006G012500--Sobic010G275500 Sobic004G072100 Sobic004G072100 Sobic006G012500--Sobic004G072100 Sobic006G012500--Sobic001G534800 Sobic006G012500--Sobic001G065000 Sobic007G132100 Sobic007G132100 Sobic006G012500--Sobic007G132100 Sobic007G218000 Sobic007G218000 Sobic006G012500--Sobic007G218000 Sobic010G275500--Sobic010G053800 Sobic010G275500--Sobic004G072100 Sobic010G275500--Sobic006G012500 Sobic001G155000 Sobic001G155000 Sobic010G275500--Sobic001G155000 Sobic010G116600 Sobic010G116600 Sobic010G275500--Sobic010G116600 Sobic010G069100 Sobic010G069100 Sobic010G275500--Sobic010G069100 Sobic009G119000 Sobic009G119000 Sobic010G275500--Sobic009G119000 Sobic007G183900 Sobic007G183900 Sobic010G275500--Sobic007G183900 Sobic010G275500--Sobic002G397500 Sobic008G092600 Sobic008G092600 Sobic007G098500--Sobic008G092600 Sobic002G396500 Sobic002G396500 Sobic007G098500--Sobic002G396500 Sobic010G105200 Sobic010G105200 Sobic007G098500--Sobic010G105200 Sobic007G098500--Sobic003G072200 Sobic001G050600 Sobic001G050600 Sobic007G098500--Sobic001G050600 Sobic001G137000 Sobic001G137000 Sobic007G098500--Sobic001G137000 Sobic007G098500--Sobic003G233400 Sobic001G287500 Sobic001G287500 Sobic007G098500--Sobic001G287500 Sobic006G265200 Sobic006G265200 Sobic007G098500--Sobic006G265200
Octagon: transcription factors


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