Gene annotation
Transcriptome id Sobic.001G457900.1
Synonym Sb01g042990
Functional annotation expressed protein
UniProt C5WST8
Pfam -
Panther DB PTHR31267 PTHR31267:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G07940 : -
RAP-DB (Rice) LOC_Os03g11460.1 : expressed protein
MaizeGDB (Corn) Zm00025a053085 , Zm00025a001280
Brachypodium KQK22918
Barley HORVU4Hr1G068300.9 , HORVU4Hr1G068300.8 , HORVU4Hr1G068300.3 , HORVU4Hr1G068300.2 , HORVU4Hr1G068300.1 , HORVU4Hr1G068300.7 , HORVU4Hr1G068300.6 , HORVU4Hr1G068300.5 , HORVU4Hr1G068300.4 , HORVU4Hr1G068300.13 , HORVU4Hr1G068300.12 , HORVU4Hr1G068300.11 , HORVU4Hr1G068300.10 , HORVU4Hr1G068300.17 , HORVU4Hr1G068300.16 , HORVU4Hr1G068300.15 , HORVU4Hr1G068300.14
Wheat TraesCS4B02G248200 , TraesCS4B02G248200 , TraesCS4D02G247500 , TraesCS4A02G056800 , TraesCS4A02G056800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G133300 ZOS9-20 - C2H2 zinc finger protein, expressed K14400: pre-mRNA cleavage complex 2 protein Pcf11
2 Sobic.003G196300 DNA binding protein, putative, expressed -
3 Sobic.001G117200 AGC_AGC_other_GWLd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
4 Sobic.008G092600 ubiquitin-protein ligase 1, putative, expressed K10592: HUWE1, MULE, E3 ubiquitin-protein ligase HUWE1
5 Sobic.001G273700 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
6 Sobic.003G072200 zinc finger protein, putative, expressed K11978: E3 ubiquitin-protein ligase UBR3
7 Sobic.003G428100 FYVE zinc finger domain containing protein, expressed -
8 Sobic.001G196500 plus-3 domain containing protein, putative, expressed -
9 Sobic.003G229500 ZOS12-01 - C2H2 zinc finger protein, expressed -
10 Sobic.002G045600 transcriptional corepressor SEUSS, putative, expressed -
11 Sobic.002G042600 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
12 Sobic.009G251500 chromosome segregation protein sudA, putative, expressed K06669: SMC3, structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
13 Sobic.001G004400 - K14290: XPO1, exportin-1
14 Sobic.003G408600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
15 Sobic.002G397500 SAC3/GANP family protein, expressed -
16 Sobic.008G132600 expressed protein -
17 Sobic.001G313700 expressed protein -
18 Sobic.010G148932 - -
19 Sobic.001G493700 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed -
20 Sobic.002G179400 DNA binding protein, putative, expressed -


Gene co-expression network
sample Sobic001G457900 Sobic001G457900 Sobic002G133300 Sobic002G133300 Sobic001G457900--Sobic002G133300 Sobic003G196300 Sobic003G196300 Sobic001G457900--Sobic003G196300 Sobic001G117200 Sobic001G117200 Sobic001G457900--Sobic001G117200 Sobic008G092600 Sobic008G092600 Sobic001G457900--Sobic008G092600 Sobic001G273700 Sobic001G273700 Sobic001G457900--Sobic001G273700 Sobic003G072200 Sobic003G072200 Sobic001G457900--Sobic003G072200 Sobic003G428100 Sobic003G428100 Sobic001G457900--Sobic003G428100 Sobic001G196500 Sobic001G196500 Sobic001G457900--Sobic001G196500 Sobic003G229500 Sobic003G229500 Sobic001G457900--Sobic003G229500 Sobic004G276400 Sobic004G276400 Sobic002G133300--Sobic004G276400 Sobic001G433800 Sobic001G433800 Sobic002G133300--Sobic001G433800 Sobic001G004400 Sobic001G004400 Sobic002G133300--Sobic001G004400 Sobic001G289800 Sobic001G289800 Sobic002G133300--Sobic001G289800 Sobic002G133300--Sobic003G072200 Sobic002G397500 Sobic002G397500 Sobic002G133300--Sobic002G397500 Sobic004G131300 Sobic004G131300 Sobic002G133300--Sobic004G131300 Sobic001G194200 Sobic001G194200 Sobic002G133300--Sobic001G194200 Sobic001G493700 Sobic001G493700 Sobic002G133300--Sobic001G493700 Sobic010G206900 Sobic010G206900 Sobic003G196300--Sobic010G206900 Sobic004G034900 Sobic004G034900 Sobic003G196300--Sobic004G034900 Sobic003G196300--Sobic001G194200 Sobic007G063000 Sobic007G063000 Sobic003G196300--Sobic007G063000 Sobic003G196300--Sobic001G289800 Sobic003G196300--Sobic004G276400 Sobic010G247800 Sobic010G247800 Sobic003G196300--Sobic010G247800 Sobic009G256300 Sobic009G256300 Sobic003G196300--Sobic009G256300 Sobic001G534700 Sobic001G534700 Sobic003G196300--Sobic001G534700 Sobic008G098900 Sobic008G098900 Sobic001G117200--Sobic008G098900 Sobic003G408600 Sobic003G408600 Sobic001G117200--Sobic003G408600 Sobic002G430000 Sobic002G430000 Sobic001G117200--Sobic002G430000 Sobic001G540400 Sobic001G540400 Sobic001G117200--Sobic001G540400 Sobic001G137000 Sobic001G137000 Sobic001G117200--Sobic001G137000 Sobic004G113400 Sobic004G113400 Sobic001G117200--Sobic004G113400 Sobic001G542500 Sobic001G542500 Sobic001G117200--Sobic001G542500 Sobic001G058700 Sobic001G058700 Sobic001G117200--Sobic001G058700 Sobic001G117200--Sobic008G092600 Sobic007G098500 Sobic007G098500 Sobic008G092600--Sobic007G098500 Sobic002G147600 Sobic002G147600 Sobic008G092600--Sobic002G147600 Sobic008G092600--Sobic001G137000 Sobic004G040500 Sobic004G040500 Sobic008G092600--Sobic004G040500 Sobic008G092600--Sobic003G072200 Sobic008G092600--Sobic008G098900 Sobic008G085300 Sobic008G085300 Sobic008G092600--Sobic008G085300 Sobic003G233400 Sobic003G233400 Sobic008G092600--Sobic003G233400 Sobic008G092600--Sobic001G117200 Sobic007G172200 Sobic007G172200 Sobic001G273700--Sobic007G172200 Sobic001G263600 Sobic001G263600 Sobic001G273700--Sobic001G263600 Sobic008G099800 Sobic008G099800 Sobic001G273700--Sobic008G099800 Sobic001G347500 Sobic001G347500 Sobic001G273700--Sobic001G347500 Sobic007G133700 Sobic007G133700 Sobic001G273700--Sobic007G133700 Sobic007G163100 Sobic007G163100 Sobic001G273700--Sobic007G163100 Sobic001G273700--Sobic001G457900 Sobic001G313700 Sobic001G313700 Sobic001G273700--Sobic001G313700 Sobic002G042600 Sobic002G042600 Sobic001G273700--Sobic002G042600 Sobic003G072200--Sobic002G397500 Sobic003G072200--Sobic007G098500 Sobic007G062800 Sobic007G062800 Sobic003G072200--Sobic007G062800 Sobic003G072200--Sobic003G233400 Sobic009G084900 Sobic009G084900 Sobic003G072200--Sobic009G084900 Sobic003G072200--Sobic008G098900 Sobic005G112300 Sobic005G112300 Sobic003G072200--Sobic005G112300 Sobic003G072200--Sobic001G347500 Sobic003G072200--Sobic002G133300 Sobic003G428100--Sobic001G457900 Sobic009G251500 Sobic009G251500 Sobic003G428100--Sobic009G251500 Sobic001G025000 Sobic001G025000 Sobic003G428100--Sobic001G025000 Sobic003G360400 Sobic003G360400 Sobic003G428100--Sobic003G360400 Sobic003G428100--Sobic001G196500 Sobic008G132600 Sobic008G132600 Sobic003G428100--Sobic008G132600 Sobic009G044800 Sobic009G044800 Sobic003G428100--Sobic009G044800 Sobic003G389200 Sobic003G389200 Sobic003G428100--Sobic003G389200 Sobic002G045600 Sobic002G045600 Sobic003G428100--Sobic002G045600 Sobic001G196500--Sobic003G229500 Sobic002G299700 Sobic002G299700 Sobic001G196500--Sobic002G299700 Sobic010G275500 Sobic010G275500 Sobic001G196500--Sobic010G275500 Sobic001G196500--Sobic008G132600 Sobic003G101400 Sobic003G101400 Sobic001G196500--Sobic003G101400 Sobic001G196500--Sobic001G540400 Sobic001G196500--Sobic003G408600 Sobic001G196500--Sobic002G397500 Sobic001G196500--Sobic001G457900 Sobic003G229500--Sobic008G132600 Sobic003G229500--Sobic007G062800 Sobic003G229500--Sobic003G101400 Sobic003G229500--Sobic001G196500 Sobic003G229500--Sobic002G042600 Sobic001G363500 Sobic001G363500 Sobic003G229500--Sobic001G363500 Sobic003G229500--Sobic001G347500 Sobic003G229500--Sobic003G072200 Sobic003G229500--Sobic001G540400
Octagon: transcription factors


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