Gene annotation
Transcriptome id Sobic.001G004400.1
Synonym HIT2, XPO1A, ATCRM1, XPO1, ATXPO1, Sb01g000490
Functional annotation -
UniProt C5WRW8
Pfam PF03810 PF08389 PF08767
Panther DB PTHR11223
NCBI CDD -
KEGG Orthology K14290; XPO1, exportin-1
Gene Ontology GO:0008536; Ran GTPase binding GO:0006886intracellular protein transport


Orthologs (automatic annotation)
TAIR AT5G17020 : exportin 1A
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a016289 , Zm00025a009124
Brachypodium KQK11998 , KQK11997 , PNT73753
Barley HORVU5Hr1G124770.23 , HORVU5Hr1G124770.22 , HORVU5Hr1G124770.21 , HORVU5Hr1G124770.20 , HORVU5Hr1G124770.27 , HORVU5Hr1G124770.26 , HORVU5Hr1G124770.25 , HORVU5Hr1G124770.24 , HORVU5Hr1G124770.29 , HORVU5Hr1G124770.28 , HORVU5Hr1G124770.30 , HORVU5Hr1G124770.31 , HORVU5Hr1G124770.32 , HORVU5Hr1G124770.33 , HORVU5Hr1G124770.34 , HORVU5Hr1G124770.35 , HORVU5Hr1G124770.36 , HORVU5Hr1G124770.18 , HORVU5Hr1G124770.19 , HORVU5Hr1G124770.12 , HORVU5Hr1G124770.13 , HORVU5Hr1G124770.10 , HORVU5Hr1G124770.11 , HORVU5Hr1G124770.16 , HORVU5Hr1G124770.17 , HORVU5Hr1G124770.14 , HORVU5Hr1G124770.15 , HORVU5Hr1G124770.1 , HORVU5Hr1G124770.2 , HORVU5Hr1G124770.3 , HORVU5Hr1G124770.4 , HORVU5Hr1G124770.5 , HORVU5Hr1G124770.6 , HORVU5Hr1G124770.7 , HORVU5Hr1G124770.8 , HORVU5Hr1G124770.9
Wheat TraesCS4A02G317800 , TraesCS5D02G568300 , TraesCS5D02G568300 , TraesCS5D02G568300 , TraesCS5D02G568300 , TraesCS4A02G317800 , TraesCS4A02G317800 , TraesCS5B02G561500 , TraesCS5B02G561500 , TraesCS4A02G317800
Populus PNT07482


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G133300 ZOS9-20 - C2H2 zinc finger protein, expressed K14400: pre-mRNA cleavage complex 2 protein Pcf11
2 Sobic.001G110600 HEAT repeat family protein, putative, expressed -
3 Sobic.007G054800 valyl-tRNA synthetase, putative, expressed K01873: VARS, valyl-tRNA synthetase
4 Sobic.004G248600 expressed protein K15166: mediator of RNA polymerase II transcription subunit 23
5 Sobic.003G312100 guanine nucleotide exchange family protein, putative, expressed -
6 Sobic.001G493700 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed -
7 Sobic.003G221400 tetratricopeptide repeat domain containing protein, expressed K00670: NAA30, N-alpha-acetyltransferase 30
8 Sobic.004G276400 expressed protein K11320: E1A-binding protein p400
9 Sobic.002G179400 DNA binding protein, putative, expressed -
10 Sobic.001G191700 expressed protein -
11 Sobic.009G109200 phosphatidylinositol kinase, putative, expressed K07203: MTOR, FRAP, serine/threonine-protein kinase mTOR
12 Sobic.007G103100 SWP, putative, expressed K15156: MED14, mediator of RNA polymerase II transcription subunit 14
13 Sobic.005G162500 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
14 Sobic.001G457900 expressed protein -
15 Sobic.002G397500 SAC3/GANP family protein, expressed -
16 Sobic.008G085300 hhH-GPD superfamily base excision DNA repair protein, expressed -
17 Sobic.008G098900 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
18 Sobic.003G186000 WD domain, G-beta repeat domain containing protein, expressed -
19 Sobic.010G053600 pre-mRNA-processing-splicing factor 8, putative, expressed K12856: PRPF8, pre-mRNA-processing factor 8
20 Sobic.007G098500 BIG, putative, expressed K10691: UBR4, E3 ubiquitin-protein ligase UBR4


Gene co-expression network
sample Sobic001G004400 Sobic001G004400 Sobic002G133300 Sobic002G133300 Sobic001G004400--Sobic002G133300 Sobic001G110600 Sobic001G110600 Sobic001G004400--Sobic001G110600 Sobic007G054800 Sobic007G054800 Sobic001G004400--Sobic007G054800 Sobic004G248600 Sobic004G248600 Sobic001G004400--Sobic004G248600 Sobic003G312100 Sobic003G312100 Sobic001G004400--Sobic003G312100 Sobic001G493700 Sobic001G493700 Sobic001G004400--Sobic001G493700 Sobic003G221400 Sobic003G221400 Sobic001G004400--Sobic003G221400 Sobic004G276400 Sobic004G276400 Sobic001G004400--Sobic004G276400 Sobic002G179400 Sobic002G179400 Sobic001G004400--Sobic002G179400 Sobic002G133300--Sobic004G276400 Sobic001G433800 Sobic001G433800 Sobic002G133300--Sobic001G433800 Sobic002G133300--Sobic001G004400 Sobic001G289800 Sobic001G289800 Sobic002G133300--Sobic001G289800 Sobic003G072200 Sobic003G072200 Sobic002G133300--Sobic003G072200 Sobic002G397500 Sobic002G397500 Sobic002G133300--Sobic002G397500 Sobic004G131300 Sobic004G131300 Sobic002G133300--Sobic004G131300 Sobic001G194200 Sobic001G194200 Sobic002G133300--Sobic001G194200 Sobic002G133300--Sobic001G493700 Sobic001G110600--Sobic007G054800 Sobic001G110600--Sobic001G004400 Sobic001G110600--Sobic003G221400 Sobic001G110600--Sobic001G493700 Sobic001G191700 Sobic001G191700 Sobic001G110600--Sobic001G191700 Sobic005G162500 Sobic005G162500 Sobic001G110600--Sobic005G162500 Sobic003G233400 Sobic003G233400 Sobic001G110600--Sobic003G233400 Sobic008G085300 Sobic008G085300 Sobic001G110600--Sobic008G085300 Sobic001G287500 Sobic001G287500 Sobic001G110600--Sobic001G287500 Sobic007G054800--Sobic003G221400 Sobic007G054800--Sobic001G110600 Sobic007G054800--Sobic001G004400 Sobic007G054800--Sobic005G162500 Sobic006G280000 Sobic006G280000 Sobic007G054800--Sobic006G280000 Sobic002G256700 Sobic002G256700 Sobic007G054800--Sobic002G256700 Sobic007G054800--Sobic002G133300 Sobic002G142900 Sobic002G142900 Sobic007G054800--Sobic002G142900 Sobic007G054800--Sobic004G131300 Sobic009G109200 Sobic009G109200 Sobic004G248600--Sobic009G109200 Sobic004G248600--Sobic001G004400 Sobic004G248600--Sobic002G133300 Sobic004G248600--Sobic003G072200 Sobic004G248600--Sobic003G312100 Sobic003G186000 Sobic003G186000 Sobic004G248600--Sobic003G186000 Sobic004G248600--Sobic004G276400 Sobic004G248600--Sobic002G397500 Sobic004G248600--Sobic005G162500 Sobic010G148932 Sobic010G148932 Sobic003G312100--Sobic010G148932 Sobic003G312100--Sobic003G233400 Sobic001G137000 Sobic001G137000 Sobic003G312100--Sobic001G137000 Sobic007G019300 Sobic007G019300 Sobic003G312100--Sobic007G019300 Sobic003G312100--Sobic003G072200 Sobic003G312100--Sobic002G397500 Sobic003G312100--Sobic001G004400 Sobic003G312100--Sobic004G248600 Sobic002G396500 Sobic002G396500 Sobic003G312100--Sobic002G396500 Sobic001G493700--Sobic002G179400 Sobic001G493700--Sobic005G162500 Sobic006G184900 Sobic006G184900 Sobic001G493700--Sobic006G184900 Sobic001G493700--Sobic002G133300 Sobic009G131300 Sobic009G131300 Sobic001G493700--Sobic009G131300 Sobic002G429300 Sobic002G429300 Sobic001G493700--Sobic002G429300 Sobic002G042600 Sobic002G042600 Sobic001G493700--Sobic002G042600 Sobic002G335600 Sobic002G335600 Sobic001G493700--Sobic002G335600 Sobic006G088200 Sobic006G088200 Sobic001G493700--Sobic006G088200 Sobic003G221400--Sobic007G054800 Sobic003G221400--Sobic005G162500 Sobic003G221400--Sobic001G493700 Sobic003G221400--Sobic001G110600 Sobic003G221400--Sobic001G004400 Sobic001G333100 Sobic001G333100 Sobic003G221400--Sobic001G333100 Sobic003G221400--Sobic002G179400 Sobic001G192000 Sobic001G192000 Sobic003G221400--Sobic001G192000 Sobic003G221400--Sobic008G085300 Sobic004G276400--Sobic003G186000 Sobic010G010700 Sobic010G010700 Sobic004G276400--Sobic010G010700 Sobic010G105200 Sobic010G105200 Sobic004G276400--Sobic010G105200 Sobic004G276400--Sobic001G194200 Sobic004G034900 Sobic004G034900 Sobic004G276400--Sobic004G034900 Sobic007G062800 Sobic007G062800 Sobic004G276400--Sobic007G062800 Sobic004G291900 Sobic004G291900 Sobic004G276400--Sobic004G291900 Sobic004G242400 Sobic004G242400 Sobic004G276400--Sobic004G242400 Sobic008G001200 Sobic008G001200 Sobic004G276400--Sobic008G001200 Sobic002G179400--Sobic001G493700 Sobic002G179400--Sobic002G042600 Sobic004G053500 Sobic004G053500 Sobic002G179400--Sobic004G053500 Sobic002G179400--Sobic002G429300 Sobic002G179400--Sobic006G184900 Sobic002G179400--Sobic003G233400 Sobic002G179400--Sobic002G133300 Sobic001G065100 Sobic001G065100 Sobic002G179400--Sobic001G065100 Sobic004G322400 Sobic004G322400 Sobic002G179400--Sobic004G322400
Octagon: transcription factors


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