Gene annotation
Transcriptome id Sobic.001G110600.1,Sobic.001G110600.2
Synonym ILA, Sb01g009860
Functional annotation HEAT repeat family protein, putative, expressed
UniProt A0A1B6QID6 , A0A1B6QIE4 , C6JS78
Pfam PF02985 PF13646 PF12074
Panther DB PTHR23346 PTHR23346:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G64790 : ILITYHIA
RAP-DB (Rice) LOC_Os03g51140.1 : HEAT repeat family protein, putative, expressed
MaizeGDB (Corn) Zm00025a034902 , Zm00025a007929
Brachypodium KQK13485 , KQK13484 , KQK13487 , KQK13486
Barley HORVU4Hr1G008750.19 , HORVU2Hr1G016470.10 , HORVU2Hr1G016470.11 , HORVU2Hr1G016470.12 , HORVU2Hr1G016470.13 , HORVU2Hr1G016470.14 , HORVU2Hr1G016470.16 , HORVU2Hr1G016470.17 , HORVU2Hr1G016470.18 , HORVU2Hr1G016470.19 , HORVU4Hr1G008750.49 , HORVU4Hr1G008750.48 , HORVU4Hr1G008750.43 , HORVU4Hr1G008750.42 , HORVU4Hr1G008750.41 , HORVU4Hr1G008750.40 , HORVU4Hr1G008750.46 , HORVU4Hr1G008750.45 , HORVU4Hr1G008750.44 , HORVU4Hr1G008750.38 , HORVU4Hr1G008750.39 , HORVU4Hr1G008750.36 , HORVU4Hr1G008750.37 , HORVU4Hr1G008750.34 , HORVU4Hr1G008750.35 , HORVU4Hr1G008750.32 , HORVU4Hr1G008750.33 , HORVU4Hr1G008750.30 , HORVU4Hr1G008750.31 , HORVU4Hr1G008750.8 , HORVU4Hr1G008750.9 , HORVU4Hr1G008750.6 , HORVU4Hr1G008750.7 , HORVU4Hr1G008750.4 , HORVU4Hr1G008750.5 , HORVU4Hr1G008750.2 , HORVU4Hr1G008750.3 , HORVU4Hr1G008750.1 , HORVU2Hr1G016470.25 , HORVU2Hr1G016470.24 , HORVU2Hr1G016470.27 , HORVU2Hr1G016470.26 , HORVU2Hr1G016470.20 , HORVU2Hr1G016470.23 , HORVU2Hr1G016470.29 , HORVU2Hr1G016470.28 , HORVU4Hr1G008750.47 , HORVU4Hr1G008750.58 , HORVU4Hr1G008750.59 , HORVU4Hr1G008750.50 , HORVU4Hr1G008750.51 , HORVU4Hr1G008750.52 , HORVU4Hr1G008750.53 , HORVU4Hr1G008750.54 , HORVU4Hr1G008750.55 , HORVU4Hr1G008750.56 , HORVU4Hr1G008750.57 , HORVU2Hr1G016470.2 , HORVU2Hr1G016470.1 , HORVU2Hr1G016470.6 , HORVU2Hr1G016470.7 , HORVU2Hr1G016470.4 , HORVU2Hr1G016470.5 , HORVU2Hr1G016470.8 , HORVU2Hr1G016470.9 , HORVU4Hr1G008750.14 , HORVU4Hr1G008750.15 , HORVU4Hr1G008750.16 , HORVU4Hr1G008750.17 , HORVU4Hr1G008750.10 , HORVU4Hr1G008750.11 , HORVU4Hr1G008750.12 , HORVU4Hr1G008750.13 , HORVU4Hr1G008750.18 , HORVU4Hr1G008750.61 , HORVU4Hr1G008750.60 , HORVU4Hr1G008750.62 , HORVU2Hr1G016470.30 , HORVU4Hr1G008750.29 , HORVU4Hr1G008750.28 , HORVU4Hr1G008750.21 , HORVU4Hr1G008750.20 , HORVU4Hr1G008750.23 , HORVU4Hr1G008750.22 , HORVU4Hr1G008750.25 , HORVU4Hr1G008750.24 , HORVU4Hr1G008750.27 , HORVU4Hr1G008750.26
Wheat TraesCS4B02G052500 , TraesCS4A02G262300 , TraesCS4D02G052700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G054800 valyl-tRNA synthetase, putative, expressed K01873: VARS, valyl-tRNA synthetase
2 Sobic.001G004400 - K14290: XPO1, exportin-1
3 Sobic.003G221400 tetratricopeptide repeat domain containing protein, expressed K00670: NAA30, N-alpha-acetyltransferase 30
4 Sobic.001G493700 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed -
5 Sobic.001G191700 expressed protein -
6 Sobic.005G162500 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
7 Sobic.003G233400 expressed protein -
8 Sobic.008G085300 hhH-GPD superfamily base excision DNA repair protein, expressed -
9 Sobic.001G287500 heat shock protein DnaJ, putative, expressed K09533: DnaJ homolog subfamily C member 13
10 Sobic.002G179400 DNA binding protein, putative, expressed -
11 Sobic.006G280000 transportin-2, putative, expressed K18752: TNPO1, IPO2, transportin-1
12 Sobic.001G089600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
13 Sobic.004G248600 expressed protein K15166: mediator of RNA polymerase II transcription subunit 23
14 Sobic.002G256700 ubiquitin carboxyl-terminal hydrolase family protein, expressed K11844: ubiquitin carboxyl-terminal hydrolase 16/45
15 Sobic.007G098500 BIG, putative, expressed K10691: UBR4, E3 ubiquitin-protein ligase UBR4
16 Sobic.003G312100 guanine nucleotide exchange family protein, putative, expressed -
17 Sobic.001G542500 1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
18 Sobic.001G117200 AGC_AGC_other_GWLd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
19 Sobic.002G234300 NOL1/NOP2/sun family protein, putative, expressed K15334: NCL1, multisite-specific tRNA:(cytosine-C5)-methyltransferase
20 Sobic.002G133300 ZOS9-20 - C2H2 zinc finger protein, expressed K14400: pre-mRNA cleavage complex 2 protein Pcf11


Gene co-expression network
sample Sobic001G110600 Sobic001G110600 Sobic007G054800 Sobic007G054800 Sobic001G110600--Sobic007G054800 Sobic001G004400 Sobic001G004400 Sobic001G110600--Sobic001G004400 Sobic003G221400 Sobic003G221400 Sobic001G110600--Sobic003G221400 Sobic001G493700 Sobic001G493700 Sobic001G110600--Sobic001G493700 Sobic001G191700 Sobic001G191700 Sobic001G110600--Sobic001G191700 Sobic005G162500 Sobic005G162500 Sobic001G110600--Sobic005G162500 Sobic003G233400 Sobic003G233400 Sobic001G110600--Sobic003G233400 Sobic008G085300 Sobic008G085300 Sobic001G110600--Sobic008G085300 Sobic001G287500 Sobic001G287500 Sobic001G110600--Sobic001G287500 Sobic007G054800--Sobic003G221400 Sobic007G054800--Sobic001G110600 Sobic007G054800--Sobic001G004400 Sobic007G054800--Sobic005G162500 Sobic006G280000 Sobic006G280000 Sobic007G054800--Sobic006G280000 Sobic002G256700 Sobic002G256700 Sobic007G054800--Sobic002G256700 Sobic002G133300 Sobic002G133300 Sobic007G054800--Sobic002G133300 Sobic002G142900 Sobic002G142900 Sobic007G054800--Sobic002G142900 Sobic004G131300 Sobic004G131300 Sobic007G054800--Sobic004G131300 Sobic001G004400--Sobic002G133300 Sobic001G004400--Sobic001G110600 Sobic001G004400--Sobic007G054800 Sobic004G248600 Sobic004G248600 Sobic001G004400--Sobic004G248600 Sobic003G312100 Sobic003G312100 Sobic001G004400--Sobic003G312100 Sobic001G004400--Sobic001G493700 Sobic001G004400--Sobic003G221400 Sobic004G276400 Sobic004G276400 Sobic001G004400--Sobic004G276400 Sobic002G179400 Sobic002G179400 Sobic001G004400--Sobic002G179400 Sobic003G221400--Sobic007G054800 Sobic003G221400--Sobic005G162500 Sobic003G221400--Sobic001G493700 Sobic003G221400--Sobic001G110600 Sobic003G221400--Sobic001G004400 Sobic001G333100 Sobic001G333100 Sobic003G221400--Sobic001G333100 Sobic003G221400--Sobic002G179400 Sobic001G192000 Sobic001G192000 Sobic003G221400--Sobic001G192000 Sobic003G221400--Sobic008G085300 Sobic001G493700--Sobic002G179400 Sobic001G493700--Sobic005G162500 Sobic006G184900 Sobic006G184900 Sobic001G493700--Sobic006G184900 Sobic001G493700--Sobic002G133300 Sobic009G131300 Sobic009G131300 Sobic001G493700--Sobic009G131300 Sobic002G429300 Sobic002G429300 Sobic001G493700--Sobic002G429300 Sobic002G042600 Sobic002G042600 Sobic001G493700--Sobic002G042600 Sobic002G335600 Sobic002G335600 Sobic001G493700--Sobic002G335600 Sobic006G088200 Sobic006G088200 Sobic001G493700--Sobic006G088200 Sobic001G299700 Sobic001G299700 Sobic001G191700--Sobic001G299700 Sobic001G542400 Sobic001G542400 Sobic001G191700--Sobic001G542400 Sobic001G191700--Sobic001G004400 Sobic001G191700--Sobic005G162500 Sobic001G400500 Sobic001G400500 Sobic001G191700--Sobic001G400500 Sobic009G109200 Sobic009G109200 Sobic001G191700--Sobic009G109200 Sobic001G191700--Sobic004G248600 Sobic006G032300 Sobic006G032300 Sobic001G191700--Sobic006G032300 Sobic001G117200 Sobic001G117200 Sobic001G191700--Sobic001G117200 Sobic005G162500--Sobic001G493700 Sobic005G162500--Sobic002G429300 Sobic001G370900 Sobic001G370900 Sobic005G162500--Sobic001G370900 Sobic005G162500--Sobic009G131300 Sobic008G088872 Sobic008G088872 Sobic005G162500--Sobic008G088872 Sobic003G186000 Sobic003G186000 Sobic005G162500--Sobic003G186000 Sobic008G098900 Sobic008G098900 Sobic005G162500--Sobic008G098900 Sobic005G162500--Sobic004G276400 Sobic005G162500--Sobic002G335600 Sobic003G233400--Sobic001G287500 Sobic003G072200 Sobic003G072200 Sobic003G233400--Sobic003G072200 Sobic007G098500 Sobic007G098500 Sobic003G233400--Sobic007G098500 Sobic001G137000 Sobic001G137000 Sobic003G233400--Sobic001G137000 Sobic003G233400--Sobic003G312100 Sobic008G092600 Sobic008G092600 Sobic003G233400--Sobic008G092600 Sobic002G396500 Sobic002G396500 Sobic003G233400--Sobic002G396500 Sobic003G233400--Sobic002G179400 Sobic004G051200 Sobic004G051200 Sobic003G233400--Sobic004G051200 Sobic008G085300--Sobic008G098900 Sobic001G542500 Sobic001G542500 Sobic008G085300--Sobic001G542500 Sobic008G085300--Sobic005G162500 Sobic008G085300--Sobic004G276400 Sobic008G085300--Sobic008G092600 Sobic002G147600 Sobic002G147600 Sobic008G085300--Sobic002G147600 Sobic008G085300--Sobic003G186000 Sobic008G085300--Sobic001G370900 Sobic004G291900 Sobic004G291900 Sobic008G085300--Sobic004G291900 Sobic001G287500--Sobic003G233400 Sobic001G287500--Sobic003G072200 Sobic001G287500--Sobic007G098500 Sobic001G287500--Sobic004G051200 Sobic001G287500--Sobic008G092600 Sobic001G347500 Sobic001G347500 Sobic001G287500--Sobic001G347500 Sobic001G426600 Sobic001G426600 Sobic001G287500--Sobic001G426600 Sobic004G040500 Sobic004G040500 Sobic001G287500--Sobic004G040500 Sobic004G204100 Sobic004G204100 Sobic001G287500--Sobic004G204100
Octagon: transcription factors


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