Gene annotation
Transcriptome id Sobic.004G276400.6,Sobic.004G276400.5,Sobic.004G276400.11,Sobic.004G276400.8,Sobic.004G276400.10,Sobic.004G276400.7,Sobic.004G276400.4,Sobic.004G276400.9
Synonym PIE1, chr13, SRCAP
Functional annotation expressed protein
UniProt A0A1Z5RPA6 , A0A1Z5RQ59
Pfam PF04851 PF07529 PF00271
Panther DB PTHR10799 PTHR10799:SF603
NCBI CDD -
KEGG Orthology K11320; E1A-binding protein p400
Gene Ontology GO:0016787; hydrolase activity GO:0005524ATP binding GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT3G12810 : SNF2 domain-containing protein / helicase domain-containing protein
RAP-DB (Rice) LOC_Os02g46450.1,LOC_Os02g46450.2 : helicase conserved C-terminal domain containing protein, expressed
MaizeGDB (Corn) Zm00025a021588 , Zm00025a032367 , Zm00025a032365 , Zm00025a032366
Brachypodium PNT77085 , PNT77086 , PNT77087 , KQK08536 , PNT72292 , PNT72293 , PNT72290 , PNT72291 , PNT72296 , PNT72297 , PNT72294 , PNT72295 , PNT72298 , PNT72299 , PNT72289 , PNT72288 , KQK08524 , KQK20932 , KQK20931 , KQK20930 , KQK08526 , KQK08527 , KQK08525 , KQK20928 , KQK08528 , KQK08529 , KQK20929 , KQK08535 , KQK08534 , KQK08533 , KQK08532 , PNT72300 , PNT72301 , PNT77088
Barley HORVU7Hr1G119080.8 , HORVU7Hr1G119080.9 , HORVU7Hr1G119080.4 , HORVU7Hr1G119080.5 , HORVU7Hr1G119080.6 , HORVU7Hr1G119080.7 , HORVU7Hr1G119080.1 , HORVU7Hr1G119080.2 , HORVU7Hr1G119080.3 , HORVU7Hr1G119080.12 , HORVU7Hr1G119080.13 , HORVU7Hr1G119080.10 , HORVU7Hr1G119080.11
Wheat TraesCS7D02G531100 , TraesCS7D02G531100 , TraesCS7D02G531100 , TraesCS7B02G468100 , TraesCS7B02G468100 , TraesCS7B02G468100 , TraesCS7A02G544700 , TraesCS7A02G544700 , TraesCS7A02G544700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G186000 WD domain, G-beta repeat domain containing protein, expressed -
2 Sobic.010G010700 PHD-finger family protein, expressed -
3 Sobic.010G105200 SYD, putative, expressed -
4 Sobic.001G194200 diacylglycerol kinase, putative, expressed -
5 Sobic.004G034900 histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
6 Sobic.007G062800 SET domain containing protein, expressed -
7 Sobic.004G291900 ESP4, putative, expressed K06100: symplekin
8 Sobic.004G242400 nuclear-pore anchor, putative, expressed K09291: TPR, MLP1, nucleoprotein TPR
9 Sobic.008G001200 RNA recognition motif containing protein, putative, expressed -
10 Sobic.002G133300 ZOS9-20 - C2H2 zinc finger protein, expressed K14400: pre-mRNA cleavage complex 2 protein Pcf11
11 Sobic.001G289800 BAH domain containing protein, putative, expressed -
12 Sobic.010G206900 transcription initiation factor TFIID subunit 1, putative, expressed K03125: transcription initiation factor TFIID subunit 1
13 Sobic.003G205200 expressed protein K19027: zinc finger FYVE domain-containing protein 26
14 Sobic.009G109200 phosphatidylinositol kinase, putative, expressed K07203: MTOR, FRAP, serine/threonine-protein kinase mTOR
15 Sobic.001G370900 expressed protein K11665: INO80, DNA helicase INO80
16 Sobic.009G256400 ATP binding protein, putative, expressed K15192: BTAF1, TATA-binding protein-associated factor
17 Sobic.002G316600 expressed protein -
18 Sobic.005G001000 RNA recognition motif containing protein, putative, expressed K10643: CNOT4, NOT4, CCR4-NOT transcription complex subunit 4
19 Sobic.006G055200 RNA-binding motif protein, putative, expressed K13192: RNA-binding protein 26
20 Sobic.002G397500 SAC3/GANP family protein, expressed -


Gene co-expression network
sample Sobic004G276400 Sobic004G276400 Sobic003G186000 Sobic003G186000 Sobic004G276400--Sobic003G186000 Sobic010G010700 Sobic010G010700 Sobic004G276400--Sobic010G010700 Sobic010G105200 Sobic010G105200 Sobic004G276400--Sobic010G105200 Sobic001G194200 Sobic001G194200 Sobic004G276400--Sobic001G194200 Sobic004G034900 Sobic004G034900 Sobic004G276400--Sobic004G034900 Sobic007G062800 Sobic007G062800 Sobic004G276400--Sobic007G062800 Sobic004G291900 Sobic004G291900 Sobic004G276400--Sobic004G291900 Sobic004G242400 Sobic004G242400 Sobic004G276400--Sobic004G242400 Sobic008G001200 Sobic008G001200 Sobic004G276400--Sobic008G001200 Sobic003G186000--Sobic004G276400 Sobic003G186000--Sobic010G105200 Sobic003G186000--Sobic010G010700 Sobic005G001000 Sobic005G001000 Sobic003G186000--Sobic005G001000 Sobic003G205200 Sobic003G205200 Sobic003G186000--Sobic003G205200 Sobic003G186000--Sobic001G194200 Sobic003G186000--Sobic007G062800 Sobic003G186000--Sobic008G001200 Sobic007G103100 Sobic007G103100 Sobic003G186000--Sobic007G103100 Sobic010G206900 Sobic010G206900 Sobic010G010700--Sobic010G206900 Sobic010G010700--Sobic004G034900 Sobic010G010700--Sobic004G276400 Sobic010G010700--Sobic001G194200 Sobic010G010700--Sobic007G062800 Sobic002G008900 Sobic002G008900 Sobic010G010700--Sobic002G008900 Sobic005G112300 Sobic005G112300 Sobic010G010700--Sobic005G112300 Sobic010G010700--Sobic008G001200 Sobic010G010700--Sobic003G186000 Sobic010G105200--Sobic004G276400 Sobic009G109200 Sobic009G109200 Sobic010G105200--Sobic009G109200 Sobic010G105200--Sobic003G186000 Sobic007G098500 Sobic007G098500 Sobic010G105200--Sobic007G098500 Sobic010G105200--Sobic004G242400 Sobic010G105200--Sobic004G034900 Sobic010G105200--Sobic007G062800 Sobic005G008800 Sobic005G008800 Sobic010G105200--Sobic005G008800 Sobic010G105200--Sobic010G010700 Sobic001G194200--Sobic004G291900 Sobic006G055200 Sobic006G055200 Sobic001G194200--Sobic006G055200 Sobic001G194200--Sobic005G001000 Sobic001G194200--Sobic010G010700 Sobic001G194200--Sobic004G276400 Sobic001G289800 Sobic001G289800 Sobic001G194200--Sobic001G289800 Sobic001G194200--Sobic008G001200 Sobic001G194200--Sobic010G206900 Sobic001G194200--Sobic004G034900 Sobic001G289600 Sobic001G289600 Sobic004G034900--Sobic001G289600 Sobic004G034900--Sobic010G206900 Sobic004G034900--Sobic010G010700 Sobic002G411600 Sobic002G411600 Sobic004G034900--Sobic002G411600 Sobic001G540400 Sobic001G540400 Sobic004G034900--Sobic001G540400 Sobic003G422500 Sobic003G422500 Sobic004G034900--Sobic003G422500 Sobic004G034900--Sobic004G276400 Sobic004G034900--Sobic002G008900 Sobic004G034900--Sobic007G062800 Sobic007G062800--Sobic001G540400 Sobic007G062800--Sobic005G112300 Sobic002G405800 Sobic002G405800 Sobic007G062800--Sobic002G405800 Sobic007G062800--Sobic002G008900 Sobic007G062800--Sobic010G010700 Sobic007G062800--Sobic004G242400 Sobic007G062800--Sobic004G034900 Sobic007G062800--Sobic004G276400 Sobic002G397500 Sobic002G397500 Sobic007G062800--Sobic002G397500 Sobic004G291900--Sobic001G194200 Sobic004G291900--Sobic001G289800 Sobic004G174200 Sobic004G174200 Sobic004G291900--Sobic004G174200 Sobic004G291900--Sobic004G276400 Sobic004G291900--Sobic005G001000 Sobic004G291900--Sobic004G034900 Sobic009G256400 Sobic009G256400 Sobic004G291900--Sobic009G256400 Sobic001G002000 Sobic001G002000 Sobic004G291900--Sobic001G002000 Sobic004G291900--Sobic010G010700 Sobic004G242400--Sobic007G062800 Sobic004G242400--Sobic009G109200 Sobic004G242400--Sobic010G105200 Sobic004G242400--Sobic004G276400 Sobic004G242400--Sobic010G010700 Sobic010G112100 Sobic010G112100 Sobic004G242400--Sobic010G112100 Sobic004G314000 Sobic004G314000 Sobic004G242400--Sobic004G314000 Sobic009G256300 Sobic009G256300 Sobic004G242400--Sobic009G256300 Sobic001G433800 Sobic001G433800 Sobic004G242400--Sobic001G433800 Sobic003G155100 Sobic003G155100 Sobic008G001200--Sobic003G155100 Sobic008G001200--Sobic010G206900 Sobic008G001200--Sobic009G256400 Sobic008G001200--Sobic003G205200 Sobic008G001200--Sobic010G010700 Sobic008G001200--Sobic001G194200 Sobic008G001200--Sobic005G001000 Sobic008G001200--Sobic004G276400 Sobic008G001200--Sobic004G174200
Octagon: transcription factors


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