Gene annotation
Transcriptome id Sobic.009G256400.1
Synonym CHA16, Sb09g030650, RGD3, CHR16, BTAF1, ATBTAF1
Functional annotation ATP binding protein, putative, expressed
UniProt A0A1B6PAP4
Pfam PF00271 PF02985 PF00176 PF12054
Panther DB PTHR10799 PTHR10799:SF753
NCBI CDD -
KEGG Orthology K15192; BTAF1, TATA-binding protein-associated factor
Gene Ontology GO:0005515; protein binding GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT3G54280 : DNA binding;ATP binding;nucleic acid binding;binding;helicases;ATP binding;DNA binding;helicases
RAP-DB (Rice) LOC_Os02g06592.1 : SNF2 family N-terminal domain containing protein, expressed
MaizeGDB (Corn) Zm00025a044741
Brachypodium KQK04568 , KQK04569 , KQK04567
Barley HORVU1Hr1G094870.9 , HORVU1Hr1G094870.8 , HORVU1Hr1G094870.3 , HORVU1Hr1G094870.2 , HORVU1Hr1G094870.1 , HORVU1Hr1G094870.7 , HORVU1Hr1G094870.6 , HORVU1Hr1G094870.5 , HORVU1Hr1G094870.4 , HORVU1Hr1G094870.13 , HORVU1Hr1G094870.12 , HORVU1Hr1G094870.11 , HORVU1Hr1G094870.10 , HORVU1Hr1G094870.14
Wheat TraesCS1A02G442400 , TraesCS1A02G442400 , TraesCS1D02G450200 , TraesCS1B02G476500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G457800 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed K18663: activating signal cointegrator complex subunit 3
2 Sobic.008G001200 RNA recognition motif containing protein, putative, expressed -
3 Sobic.001G370900 expressed protein K11665: INO80, DNA helicase INO80
4 Sobic.004G291900 ESP4, putative, expressed K06100: symplekin
5 Sobic.005G001000 RNA recognition motif containing protein, putative, expressed K10643: CNOT4, NOT4, CCR4-NOT transcription complex subunit 4
6 Sobic.003G166750 - K15188: cyclin T
7 Sobic.001G194200 diacylglycerol kinase, putative, expressed -
8 Sobic.004G276400 expressed protein K11320: E1A-binding protein p400
9 Sobic.010G010700 PHD-finger family protein, expressed -
10 Sobic.003G170700 expressed protein -
11 Sobic.010G206900 transcription initiation factor TFIID subunit 1, putative, expressed K03125: transcription initiation factor TFIID subunit 1
12 Sobic.001G289800 BAH domain containing protein, putative, expressed -
13 Sobic.007G062800 SET domain containing protein, expressed -
14 Sobic.002G405800 PHD-finger family protein, expressed -
15 Sobic.010G247800 zinc finger, C3HC4 type domain containing protein, expressed K10696: E3 ubiquitin-protein ligase BRE1
16 Sobic.003G043200 EMB2410, putative, expressed -
17 Sobic.003G155100 suppressor of Mek, putative, expressed K17491: SMEK, protein phosphatase 4 regulatory subunit 3
18 Sobic.002G146300 cig3, putative, expressed K14409: SMG7, protein SMG7
19 Sobic.004G034900 histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
20 Sobic.009G053900 HECT-domain domain containing protein, expressed K10589: ubiquitin-protein ligase E3 C


Gene co-expression network
sample Sobic009G256400 Sobic009G256400 Sobic001G457800 Sobic001G457800 Sobic009G256400--Sobic001G457800 Sobic008G001200 Sobic008G001200 Sobic009G256400--Sobic008G001200 Sobic001G370900 Sobic001G370900 Sobic009G256400--Sobic001G370900 Sobic004G291900 Sobic004G291900 Sobic009G256400--Sobic004G291900 Sobic005G001000 Sobic005G001000 Sobic009G256400--Sobic005G001000 Sobic003G166750 Sobic003G166750 Sobic009G256400--Sobic003G166750 Sobic001G194200 Sobic001G194200 Sobic009G256400--Sobic001G194200 Sobic004G276400 Sobic004G276400 Sobic009G256400--Sobic004G276400 Sobic010G010700 Sobic010G010700 Sobic009G256400--Sobic010G010700 Sobic001G457800--Sobic009G256400 Sobic001G457800--Sobic008G001200 Sobic001G457800--Sobic001G370900 Sobic001G457800--Sobic003G166750 Sobic003G155100 Sobic003G155100 Sobic001G457800--Sobic003G155100 Sobic004G001500 Sobic004G001500 Sobic001G457800--Sobic004G001500 Sobic001G230000 Sobic001G230000 Sobic001G457800--Sobic001G230000 Sobic003G043200 Sobic003G043200 Sobic001G457800--Sobic003G043200 Sobic004G334300 Sobic004G334300 Sobic001G457800--Sobic004G334300 Sobic008G001200--Sobic003G155100 Sobic010G206900 Sobic010G206900 Sobic008G001200--Sobic010G206900 Sobic008G001200--Sobic009G256400 Sobic003G205200 Sobic003G205200 Sobic008G001200--Sobic003G205200 Sobic008G001200--Sobic010G010700 Sobic008G001200--Sobic001G194200 Sobic008G001200--Sobic005G001000 Sobic008G001200--Sobic004G276400 Sobic004G174200 Sobic004G174200 Sobic008G001200--Sobic004G174200 Sobic008G098900 Sobic008G098900 Sobic001G370900--Sobic008G098900 Sobic001G370900--Sobic005G001000 Sobic001G370900--Sobic009G256400 Sobic002G146300 Sobic002G146300 Sobic001G370900--Sobic002G146300 Sobic001G370900--Sobic003G205200 Sobic001G370900--Sobic001G194200 Sobic001G370900--Sobic004G276400 Sobic001G370900--Sobic008G001200 Sobic001G370900--Sobic001G457800 Sobic004G291900--Sobic001G194200 Sobic001G289800 Sobic001G289800 Sobic004G291900--Sobic001G289800 Sobic004G291900--Sobic004G174200 Sobic004G291900--Sobic004G276400 Sobic004G291900--Sobic005G001000 Sobic004G034900 Sobic004G034900 Sobic004G291900--Sobic004G034900 Sobic004G291900--Sobic009G256400 Sobic001G002000 Sobic001G002000 Sobic004G291900--Sobic001G002000 Sobic004G291900--Sobic010G010700 Sobic005G001000--Sobic001G194200 Sobic002G008900 Sobic002G008900 Sobic005G001000--Sobic002G008900 Sobic005G001000--Sobic001G370900 Sobic005G001000--Sobic003G205200 Sobic005G001000--Sobic004G291900 Sobic003G186000 Sobic003G186000 Sobic005G001000--Sobic003G186000 Sobic005G001000--Sobic008G001200 Sobic003G422500 Sobic003G422500 Sobic005G001000--Sobic003G422500 Sobic005G001000--Sobic009G256400 Sobic009G165700 Sobic009G165700 Sobic003G166750--Sobic009G165700 Sobic003G166750--Sobic008G001200 Sobic003G166750--Sobic009G256400 Sobic003G166750--Sobic001G370900 Sobic003G166750--Sobic001G289800 Sobic002G316600 Sobic002G316600 Sobic003G166750--Sobic002G316600 Sobic003G166750--Sobic001G194200 Sobic001G527800 Sobic001G527800 Sobic003G166750--Sobic001G527800 Sobic003G166750--Sobic001G457800 Sobic001G194200--Sobic004G291900 Sobic006G055200 Sobic006G055200 Sobic001G194200--Sobic006G055200 Sobic001G194200--Sobic005G001000 Sobic001G194200--Sobic010G010700 Sobic001G194200--Sobic004G276400 Sobic001G194200--Sobic001G289800 Sobic001G194200--Sobic008G001200 Sobic001G194200--Sobic010G206900 Sobic001G194200--Sobic004G034900 Sobic004G276400--Sobic003G186000 Sobic004G276400--Sobic010G010700 Sobic010G105200 Sobic010G105200 Sobic004G276400--Sobic010G105200 Sobic004G276400--Sobic001G194200 Sobic004G276400--Sobic004G034900 Sobic007G062800 Sobic007G062800 Sobic004G276400--Sobic007G062800 Sobic004G276400--Sobic004G291900 Sobic004G242400 Sobic004G242400 Sobic004G276400--Sobic004G242400 Sobic004G276400--Sobic008G001200 Sobic010G010700--Sobic010G206900 Sobic010G010700--Sobic004G034900 Sobic010G010700--Sobic004G276400 Sobic010G010700--Sobic001G194200 Sobic010G010700--Sobic007G062800 Sobic010G010700--Sobic002G008900 Sobic005G112300 Sobic005G112300 Sobic010G010700--Sobic005G112300 Sobic010G010700--Sobic008G001200 Sobic010G010700--Sobic003G186000
Octagon: transcription factors


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