Gene annotation
Transcriptome id Sobic.003G170700.3,Sobic.003G170700.7,Sobic.003G170700.8,Sobic.003G170700.9,Sobic.003G170700.5,Sobic.003G170700.6,Sobic.003G170700.2
Synonym
Functional annotation expressed protein
UniProt A0A1W0VXQ8 , A0A1W0VXR3 , A0A1W0VXP2 , A0A1B6Q3T9 , A0A1B6Q3T0 , A0A1W0VXN5
Pfam PF12166
Panther DB PTHR13167:SF45 PTHR13167 PTHR13167 PTHR13167:SF45
NCBI CDD KOG1893; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology GO:0008381; mechanosensitive ion channel activity GO:0016021integral component of membrane GO:0016021integral component of membrane GO:0008381mechanosensitive ion channel activity


Orthologs (automatic annotation)
TAIR AT2G48060 : -
RAP-DB (Rice) LOC_Os01g29230.1 : expressed protein
MaizeGDB (Corn) Zm00025a024607
Brachypodium KQK04385
Barley HORVU3Hr1G046570.7 , HORVU3Hr1G046570.6 , HORVU3Hr1G046570.5 , HORVU3Hr1G046570.4 , HORVU3Hr1G046570.3 , HORVU3Hr1G046570.2 , HORVU3Hr1G046570.1 , HORVU3Hr1G046600.2 , HORVU3Hr1G046570.8 , HORVU3Hr1G046600.5 , HORVU3Hr1G046600.4 , HORVU3Hr1G046600.7 , HORVU3Hr1G046600.6 , HORVU3Hr1G046600.1 , HORVU3Hr1G046600.3 , HORVU3Hr1G046600.8 , HORVU3Hr1G046570.16 , HORVU3Hr1G046570.15 , HORVU3Hr1G046570.14 , HORVU3Hr1G046570.13 , HORVU3Hr1G046570.12 , HORVU3Hr1G046570.11 , HORVU3Hr1G046570.10 , HORVU3Hr1G046570.9
Wheat TraesCS3B02G222000 , TraesCS3B02G222000 , TraesCS3D02G196400 , TraesCS3D02G196400 , TraesCS3A02G192500 , TraesCS3A02G192500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G256400 ATP binding protein, putative, expressed K15192: BTAF1, TATA-binding protein-associated factor
2 Sobic.008G088872 - -
3 Sobic.001G370900 expressed protein K11665: INO80, DNA helicase INO80
4 Sobic.001G457800 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed K18663: activating signal cointegrator complex subunit 3
5 Sobic.005G162500 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
6 Sobic.003G072200 zinc finger protein, putative, expressed K11978: E3 ubiquitin-protein ligase UBR3
7 Sobic.001G542400 CCR4-Not complex component, Not1domain containing protein, expressed K12604: CNOT1, CCR4-NOT transcription complex subunit 1
8 Sobic.006G040500 phospholipid-transporting ATPase 2, putative, expressed K01530: phospholipid-translocating ATPase
9 Sobic.004G040500 expressed protein -
10 Sobic.007G062800 SET domain containing protein, expressed -
11 Sobic.002G405800 PHD-finger family protein, expressed -
12 Sobic.003G186000 WD domain, G-beta repeat domain containing protein, expressed -
13 Sobic.004G276400 expressed protein K11320: E1A-binding protein p400
14 Sobic.002G335600 eukaryotic translation initiation factor 4G, putative, expressed K03260: translation initiation factor 4G
15 Sobic.008G098900 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
16 Sobic.003G166750 - K15188: cyclin T
17 Sobic.003G043200 EMB2410, putative, expressed -
18 Sobic.007G133700 expressed protein -
19 Sobic.009G131300 cation-transporting ATPase, putative, expressed K14950: ATP13A1, manganese-transporting P-type ATPase
20 Sobic.003G205200 expressed protein K19027: zinc finger FYVE domain-containing protein 26


Gene co-expression network
sample Sobic003G170700 Sobic003G170700 Sobic009G256400 Sobic009G256400 Sobic003G170700--Sobic009G256400 Sobic008G088872 Sobic008G088872 Sobic003G170700--Sobic008G088872 Sobic001G370900 Sobic001G370900 Sobic003G170700--Sobic001G370900 Sobic001G457800 Sobic001G457800 Sobic003G170700--Sobic001G457800 Sobic005G162500 Sobic005G162500 Sobic003G170700--Sobic005G162500 Sobic003G072200 Sobic003G072200 Sobic003G170700--Sobic003G072200 Sobic001G542400 Sobic001G542400 Sobic003G170700--Sobic001G542400 Sobic006G040500 Sobic006G040500 Sobic003G170700--Sobic006G040500 Sobic004G040500 Sobic004G040500 Sobic003G170700--Sobic004G040500 Sobic009G256400--Sobic001G457800 Sobic008G001200 Sobic008G001200 Sobic009G256400--Sobic008G001200 Sobic009G256400--Sobic001G370900 Sobic004G291900 Sobic004G291900 Sobic009G256400--Sobic004G291900 Sobic005G001000 Sobic005G001000 Sobic009G256400--Sobic005G001000 Sobic003G166750 Sobic003G166750 Sobic009G256400--Sobic003G166750 Sobic001G194200 Sobic001G194200 Sobic009G256400--Sobic001G194200 Sobic004G276400 Sobic004G276400 Sobic009G256400--Sobic004G276400 Sobic010G010700 Sobic010G010700 Sobic009G256400--Sobic010G010700 Sobic008G088872--Sobic005G162500 Sobic008G088872--Sobic001G370900 Sobic009G131300 Sobic009G131300 Sobic008G088872--Sobic009G131300 Sobic006G184900 Sobic006G184900 Sobic008G088872--Sobic006G184900 Sobic005G062200 Sobic005G062200 Sobic008G088872--Sobic005G062200 Sobic001G263600 Sobic001G263600 Sobic008G088872--Sobic001G263600 Sobic002G042600 Sobic002G042600 Sobic008G088872--Sobic002G042600 Sobic002G429300 Sobic002G429300 Sobic008G088872--Sobic002G429300 Sobic002G335600 Sobic002G335600 Sobic008G088872--Sobic002G335600 Sobic008G098900 Sobic008G098900 Sobic001G370900--Sobic008G098900 Sobic001G370900--Sobic005G001000 Sobic001G370900--Sobic009G256400 Sobic002G146300 Sobic002G146300 Sobic001G370900--Sobic002G146300 Sobic003G205200 Sobic003G205200 Sobic001G370900--Sobic003G205200 Sobic001G370900--Sobic001G194200 Sobic001G370900--Sobic004G276400 Sobic001G370900--Sobic008G001200 Sobic001G370900--Sobic001G457800 Sobic001G457800--Sobic009G256400 Sobic001G457800--Sobic008G001200 Sobic001G457800--Sobic001G370900 Sobic001G457800--Sobic003G166750 Sobic003G155100 Sobic003G155100 Sobic001G457800--Sobic003G155100 Sobic004G001500 Sobic004G001500 Sobic001G457800--Sobic004G001500 Sobic001G230000 Sobic001G230000 Sobic001G457800--Sobic001G230000 Sobic003G043200 Sobic003G043200 Sobic001G457800--Sobic003G043200 Sobic004G334300 Sobic004G334300 Sobic001G457800--Sobic004G334300 Sobic001G493700 Sobic001G493700 Sobic005G162500--Sobic001G493700 Sobic005G162500--Sobic002G429300 Sobic005G162500--Sobic001G370900 Sobic005G162500--Sobic009G131300 Sobic005G162500--Sobic008G088872 Sobic003G186000 Sobic003G186000 Sobic005G162500--Sobic003G186000 Sobic005G162500--Sobic008G098900 Sobic005G162500--Sobic004G276400 Sobic005G162500--Sobic002G335600 Sobic002G397500 Sobic002G397500 Sobic003G072200--Sobic002G397500 Sobic007G098500 Sobic007G098500 Sobic003G072200--Sobic007G098500 Sobic007G062800 Sobic007G062800 Sobic003G072200--Sobic007G062800 Sobic003G233400 Sobic003G233400 Sobic003G072200--Sobic003G233400 Sobic009G084900 Sobic009G084900 Sobic003G072200--Sobic009G084900 Sobic003G072200--Sobic008G098900 Sobic005G112300 Sobic005G112300 Sobic003G072200--Sobic005G112300 Sobic001G347500 Sobic001G347500 Sobic003G072200--Sobic001G347500 Sobic002G133300 Sobic002G133300 Sobic003G072200--Sobic002G133300 Sobic001G299700 Sobic001G299700 Sobic001G542400--Sobic001G299700 Sobic009G109200 Sobic009G109200 Sobic001G542400--Sobic009G109200 Sobic001G400500 Sobic001G400500 Sobic001G542400--Sobic001G400500 Sobic009G256300 Sobic009G256300 Sobic001G542400--Sobic009G256300 Sobic010G112100 Sobic010G112100 Sobic001G542400--Sobic010G112100 Sobic001G542400--Sobic004G276400 Sobic010G105200 Sobic010G105200 Sobic001G542400--Sobic010G105200 Sobic005G008800 Sobic005G008800 Sobic001G542400--Sobic005G008800 Sobic001G542400--Sobic008G001200 Sobic006G040500--Sobic003G186000 Sobic006G040500--Sobic005G001000 Sobic006G040500--Sobic007G062800 Sobic006G040500--Sobic005G112300 Sobic006G040500--Sobic010G010700 Sobic002G008900 Sobic002G008900 Sobic006G040500--Sobic002G008900 Sobic006G040500--Sobic009G256400 Sobic010G123600 Sobic010G123600 Sobic006G040500--Sobic010G123600 Sobic006G040500--Sobic004G276400 Sobic008G092600 Sobic008G092600 Sobic004G040500--Sobic008G092600 Sobic002G147600 Sobic002G147600 Sobic004G040500--Sobic002G147600 Sobic004G040500--Sobic002G335600 Sobic004G040500--Sobic001G493700 Sobic004G040500--Sobic003G072200 Sobic004G040500--Sobic003G233400 Sobic004G023100 Sobic004G023100 Sobic004G040500--Sobic004G023100 Sobic001G287500 Sobic001G287500 Sobic004G040500--Sobic001G287500 Sobic003G171400 Sobic003G171400 Sobic004G040500--Sobic003G171400
Octagon: transcription factors


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