Gene annotation
Transcriptome id Sobic.007G133700.1
Synonym Sb07g020950
Functional annotation expressed protein
UniProt C5YL44
Pfam -
Panther DB PTHR34536 PTHR34536:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G52530 : dentin sialophosphoprotein-related
RAP-DB (Rice) LOC_Os08g33320.1 : expressed protein
MaizeGDB (Corn) Zm00025a031105
Brachypodium KQJ98355 , PNT68129 , PNT68130
Barley HORVU7Hr1G064880.7 , HORVU7Hr1G064880.6 , HORVU7Hr1G064880.5 , HORVU7Hr1G064880.4 , HORVU7Hr1G064880.3 , HORVU7Hr1G064880.2 , HORVU7Hr1G064880.1 , HORVU7Hr1G064880.9 , HORVU7Hr1G064880.8 , HORVU7Hr1G064880.17 , HORVU7Hr1G064880.16 , HORVU7Hr1G064880.15 , HORVU7Hr1G064880.14 , HORVU7Hr1G064880.13 , HORVU7Hr1G064880.12 , HORVU7Hr1G064880.11 , HORVU7Hr1G064880.10
Wheat TraesCS7A02G291500 , TraesCS7D02G284500 , TraesCS7B02G198200 , TraesCS7B02G198200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G422500 expressed protein -
2 Sobic.009G053900 HECT-domain domain containing protein, expressed K10589: ubiquitin-protein ligase E3 C
3 Sobic.002G146300 cig3, putative, expressed K14409: SMG7, protein SMG7
4 Sobic.008G098900 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
5 Sobic.007G172200 inositol or phosphatidylinositol phosphatase/ phosphoric monoester hydrolase, putative, expressed K18081: myotubularin-related protein 1/2
6 Sobic.001G370900 expressed protein K11665: INO80, DNA helicase INO80
7 Sobic.007G075400 expressed protein -
8 Sobic.003G196300 DNA binding protein, putative, expressed -
9 Sobic.001G273700 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
10 Sobic.008G132600 expressed protein -
11 Sobic.004G034900 histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
12 Sobic.003G101400 transcriptional repressor, putative, expressed K11644: paired amphipathic helix protein Sin3a
13 Sobic.010G206900 transcription initiation factor TFIID subunit 1, putative, expressed K03125: transcription initiation factor TFIID subunit 1
14 Sobic.009G165700 SAC3/GANP family protein, putative, expressed -
15 Sobic.009G256400 ATP binding protein, putative, expressed K15192: BTAF1, TATA-binding protein-associated factor
16 Sobic.002G411600 CW-type Zinc Finger, putative, expressed -
17 Sobic.002G147600 ubiquitin-protein ligase 1, putative, expressed K10592: HUWE1, MULE, E3 ubiquitin-protein ligase HUWE1
18 Sobic.005G001000 RNA recognition motif containing protein, putative, expressed K10643: CNOT4, NOT4, CCR4-NOT transcription complex subunit 4
19 Sobic.001G534700 plus-3 domain containing protein, putative, expressed -
20 Sobic.010G247800 zinc finger, C3HC4 type domain containing protein, expressed K10696: E3 ubiquitin-protein ligase BRE1


Gene co-expression network
sample Sobic007G133700 Sobic007G133700 Sobic003G422500 Sobic003G422500 Sobic007G133700--Sobic003G422500 Sobic009G053900 Sobic009G053900 Sobic007G133700--Sobic009G053900 Sobic002G146300 Sobic002G146300 Sobic007G133700--Sobic002G146300 Sobic008G098900 Sobic008G098900 Sobic007G133700--Sobic008G098900 Sobic007G172200 Sobic007G172200 Sobic007G133700--Sobic007G172200 Sobic001G370900 Sobic001G370900 Sobic007G133700--Sobic001G370900 Sobic007G075400 Sobic007G075400 Sobic007G133700--Sobic007G075400 Sobic003G196300 Sobic003G196300 Sobic007G133700--Sobic003G196300 Sobic001G273700 Sobic001G273700 Sobic007G133700--Sobic001G273700 Sobic002G411600 Sobic002G411600 Sobic003G422500--Sobic002G411600 Sobic009G191000 Sobic009G191000 Sobic003G422500--Sobic009G191000 Sobic001G289600 Sobic001G289600 Sobic003G422500--Sobic001G289600 Sobic009G165700 Sobic009G165700 Sobic003G422500--Sobic009G165700 Sobic002G008900 Sobic002G008900 Sobic003G422500--Sobic002G008900 Sobic004G034900 Sobic004G034900 Sobic003G422500--Sobic004G034900 Sobic001G289800 Sobic001G289800 Sobic003G422500--Sobic001G289800 Sobic001G540400 Sobic001G540400 Sobic003G422500--Sobic001G540400 Sobic008G132600 Sobic008G132600 Sobic003G422500--Sobic008G132600 Sobic009G053900--Sobic009G191000 Sobic003G118200 Sobic003G118200 Sobic009G053900--Sobic003G118200 Sobic009G053900--Sobic002G008900 Sobic009G053900--Sobic003G422500 Sobic001G365900 Sobic001G365900 Sobic009G053900--Sobic001G365900 Sobic009G053900--Sobic001G289600 Sobic010G206900 Sobic010G206900 Sobic009G053900--Sobic010G206900 Sobic009G053900--Sobic007G075400 Sobic009G053900--Sobic001G540400 Sobic003G205200 Sobic003G205200 Sobic002G146300--Sobic003G205200 Sobic002G146300--Sobic001G370900 Sobic010G139600 Sobic010G139600 Sobic002G146300--Sobic010G139600 Sobic005G001000 Sobic005G001000 Sobic002G146300--Sobic005G001000 Sobic004G001500 Sobic004G001500 Sobic002G146300--Sobic004G001500 Sobic008G001200 Sobic008G001200 Sobic002G146300--Sobic008G001200 Sobic001G194200 Sobic001G194200 Sobic002G146300--Sobic001G194200 Sobic002G146300--Sobic007G075400 Sobic009G256400 Sobic009G256400 Sobic002G146300--Sobic009G256400 Sobic008G098900--Sobic001G370900 Sobic008G085300 Sobic008G085300 Sobic008G098900--Sobic008G085300 Sobic001G117200 Sobic001G117200 Sobic008G098900--Sobic001G117200 Sobic008G098900--Sobic003G205200 Sobic008G098900--Sobic005G001000 Sobic003G072200 Sobic003G072200 Sobic008G098900--Sobic003G072200 Sobic005G162500 Sobic005G162500 Sobic008G098900--Sobic005G162500 Sobic002G042600 Sobic002G042600 Sobic008G098900--Sobic002G042600 Sobic004G276400 Sobic004G276400 Sobic008G098900--Sobic004G276400 Sobic007G172200--Sobic001G273700 Sobic007G172200--Sobic001G370900 Sobic007G172200--Sobic007G133700 Sobic007G172200--Sobic003G118200 Sobic007G172200--Sobic009G256400 Sobic007G172200--Sobic003G422500 Sobic007G172200--Sobic005G001000 Sobic007G172200--Sobic009G165700 Sobic007G172200--Sobic008G132600 Sobic001G370900--Sobic008G098900 Sobic001G370900--Sobic005G001000 Sobic001G370900--Sobic009G256400 Sobic001G370900--Sobic002G146300 Sobic001G370900--Sobic003G205200 Sobic001G370900--Sobic001G194200 Sobic001G370900--Sobic004G276400 Sobic001G370900--Sobic008G001200 Sobic001G457800 Sobic001G457800 Sobic001G370900--Sobic001G457800 Sobic007G075400--Sobic010G139600 Sobic007G075400--Sobic009G053900 Sobic004G331100 Sobic004G331100 Sobic007G075400--Sobic004G331100 Sobic007G075400--Sobic002G008900 Sobic007G075400--Sobic009G191000 Sobic007G075400--Sobic002G146300 Sobic007G075400--Sobic003G422500 Sobic003G313500 Sobic003G313500 Sobic007G075400--Sobic003G313500 Sobic004G065000 Sobic004G065000 Sobic007G075400--Sobic004G065000 Sobic003G196300--Sobic010G206900 Sobic003G196300--Sobic004G034900 Sobic003G196300--Sobic001G194200 Sobic007G063000 Sobic007G063000 Sobic003G196300--Sobic007G063000 Sobic003G196300--Sobic001G289800 Sobic003G196300--Sobic004G276400 Sobic010G247800 Sobic010G247800 Sobic003G196300--Sobic010G247800 Sobic009G256300 Sobic009G256300 Sobic003G196300--Sobic009G256300 Sobic001G534700 Sobic001G534700 Sobic003G196300--Sobic001G534700 Sobic001G273700--Sobic007G172200 Sobic001G263600 Sobic001G263600 Sobic001G273700--Sobic001G263600 Sobic008G099800 Sobic008G099800 Sobic001G273700--Sobic008G099800 Sobic001G347500 Sobic001G347500 Sobic001G273700--Sobic001G347500 Sobic001G273700--Sobic007G133700 Sobic007G163100 Sobic007G163100 Sobic001G273700--Sobic007G163100 Sobic001G457900 Sobic001G457900 Sobic001G273700--Sobic001G457900 Sobic001G313700 Sobic001G313700 Sobic001G273700--Sobic001G313700 Sobic001G273700--Sobic002G042600
Octagon: transcription factors


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