Gene annotation
Transcriptome id Sobic.009G165700.1
Synonym Sb09g022765
Functional annotation SAC3/GANP family protein, putative, expressed
UniProt A0A1Z5R2Y9
Pfam PF10075
Panther DB PTHR12436 PTHR12436:SF20
NCBI CDD KOG1861; Leucine permease transcriptional regulator
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G39340 : SAC3/GANP/Nin1/mts3/eIF-3 p25 family
RAP-DB (Rice) LOC_Os05g38730.1 : SAC3/GANP family protein, putative, expressed
MaizeGDB (Corn) Zm00025a037712 , Zm00025a043916
Brachypodium KQK05862
Barley HORVU1Hr1G071780.41 , HORVU1Hr1G071780.40 , HORVU1Hr1G071780.43 , HORVU1Hr1G071780.42 , HORVU1Hr1G071780.23 , HORVU1Hr1G071780.22 , HORVU1Hr1G071780.21 , HORVU1Hr1G071780.20 , HORVU1Hr1G071780.27 , HORVU1Hr1G071780.26 , HORVU1Hr1G071780.25 , HORVU1Hr1G071780.24 , HORVU1Hr1G071780.29 , HORVU1Hr1G071780.28 , HORVU1Hr1G071780.30 , HORVU1Hr1G071780.31 , HORVU1Hr1G071780.32 , HORVU1Hr1G071780.33 , HORVU1Hr1G071780.34 , HORVU1Hr1G071780.35 , HORVU1Hr1G071780.36 , HORVU1Hr1G071780.37 , HORVU1Hr1G071780.38 , HORVU1Hr1G071780.39 , HORVU1Hr1G071780.6 , HORVU1Hr1G071780.1 , HORVU1Hr1G071780.2 , HORVU1Hr1G071780.3 , HORVU1Hr1G071780.5 , HORVU1Hr1G071780.8 , HORVU1Hr1G071780.9 , HORVU1Hr1G071780.18 , HORVU1Hr1G071780.19 , HORVU1Hr1G071780.12 , HORVU1Hr1G071780.13 , HORVU1Hr1G071780.10 , HORVU1Hr1G071780.11 , HORVU1Hr1G071780.16 , HORVU1Hr1G071780.17 , HORVU1Hr1G071780.14 , HORVU1Hr1G071780.15 , HORVU1Hr1G071780.4 , HORVU1Hr1G071780.7
Wheat TraesCS1B02G297000 , TraesCS1B02G297000 , TraesCS1B02G297000 , TraesCS1B02G297000 , TraesCS1B02G297000 , TraesCS1B02G297000 , TraesCS1B02G297000 , TraesCS1A02G287600 , TraesCS1A02G287600 , TraesCS1A02G287600 , TraesCS1A02G287600 , TraesCS1A02G287600 , TraesCS1A02G287600 , TraesCS1A02G287600 , TraesCS1A02G287600 , TraesCS1A02G287600 , TraesCS1D02G286500 , TraesCS1D02G286500 , TraesCS1D02G286500 , TraesCS1D02G286500 , TraesCS1D02G286500 , TraesCS1D02G286500 , TraesCS1D02G286500 , TraesCS1D02G286500 , TraesCS1D02G286500 , TraesCS1D02G286500 , TraesCS1D02G286500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G422500 expressed protein -
2 Sobic.010G247800 zinc finger, C3HC4 type domain containing protein, expressed K10696: E3 ubiquitin-protein ligase BRE1
3 Sobic.010G206900 transcription initiation factor TFIID subunit 1, putative, expressed K03125: transcription initiation factor TFIID subunit 1
4 Sobic.003G166750 - K15188: cyclin T
5 Sobic.008G087866 - -
6 Sobic.001G451400 HEAT repeat family protein, putative, expressed K15305: VAC14, vacuole morphology and inheritance protein 14
7 Sobic.003G170900 - -
8 Sobic.001G534700 plus-3 domain containing protein, putative, expressed -
9 Sobic.008G001200 RNA recognition motif containing protein, putative, expressed -
10 Sobic.002G411600 CW-type Zinc Finger, putative, expressed -
11 Sobic.003G196300 DNA binding protein, putative, expressed -
12 Sobic.001G289800 BAH domain containing protein, putative, expressed -
13 Sobic.001G370900 expressed protein K11665: INO80, DNA helicase INO80
14 Sobic.003G362600 AT hook motif family protein, expressed K15200: general transcription factor 3C polypeptide 2
15 Sobic.005G112300 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
16 Sobic.009G256400 ATP binding protein, putative, expressed K15192: BTAF1, TATA-binding protein-associated factor
17 Sobic.007G063000 expressed protein -
18 Sobic.001G194200 diacylglycerol kinase, putative, expressed -
19 Sobic.001G540400 expressed protein -
20 Sobic.004G291900 ESP4, putative, expressed K06100: symplekin


Gene co-expression network
sample Sobic009G165700 Sobic009G165700 Sobic003G422500 Sobic003G422500 Sobic009G165700--Sobic003G422500 Sobic010G247800 Sobic010G247800 Sobic009G165700--Sobic010G247800 Sobic010G206900 Sobic010G206900 Sobic009G165700--Sobic010G206900 Sobic003G166750 Sobic003G166750 Sobic009G165700--Sobic003G166750 Sobic008G087866 Sobic008G087866 Sobic009G165700--Sobic008G087866 Sobic001G451400 Sobic001G451400 Sobic009G165700--Sobic001G451400 Sobic003G170900 Sobic003G170900 Sobic009G165700--Sobic003G170900 Sobic001G534700 Sobic001G534700 Sobic009G165700--Sobic001G534700 Sobic008G001200 Sobic008G001200 Sobic009G165700--Sobic008G001200 Sobic002G411600 Sobic002G411600 Sobic003G422500--Sobic002G411600 Sobic009G191000 Sobic009G191000 Sobic003G422500--Sobic009G191000 Sobic001G289600 Sobic001G289600 Sobic003G422500--Sobic001G289600 Sobic003G422500--Sobic009G165700 Sobic002G008900 Sobic002G008900 Sobic003G422500--Sobic002G008900 Sobic004G034900 Sobic004G034900 Sobic003G422500--Sobic004G034900 Sobic001G289800 Sobic001G289800 Sobic003G422500--Sobic001G289800 Sobic001G540400 Sobic001G540400 Sobic003G422500--Sobic001G540400 Sobic008G132600 Sobic008G132600 Sobic003G422500--Sobic008G132600 Sobic010G247800--Sobic010G206900 Sobic010G247800--Sobic009G165700 Sobic010G247800--Sobic002G411600 Sobic010G247800--Sobic003G422500 Sobic010G247800--Sobic009G191000 Sobic001G002000 Sobic001G002000 Sobic010G247800--Sobic001G002000 Sobic001G363500 Sobic001G363500 Sobic010G247800--Sobic001G363500 Sobic004G291900 Sobic004G291900 Sobic010G247800--Sobic004G291900 Sobic002G405800 Sobic002G405800 Sobic010G247800--Sobic002G405800 Sobic010G010700 Sobic010G010700 Sobic010G206900--Sobic010G010700 Sobic001G365900 Sobic001G365900 Sobic010G206900--Sobic001G365900 Sobic010G206900--Sobic004G034900 Sobic010G206900--Sobic001G534700 Sobic010G206900--Sobic010G247800 Sobic010G206900--Sobic002G411600 Sobic010G206900--Sobic008G001200 Sobic003G196300 Sobic003G196300 Sobic010G206900--Sobic003G196300 Sobic010G206900--Sobic009G165700 Sobic003G166750--Sobic009G165700 Sobic003G166750--Sobic008G001200 Sobic009G256400 Sobic009G256400 Sobic003G166750--Sobic009G256400 Sobic001G370900 Sobic001G370900 Sobic003G166750--Sobic001G370900 Sobic003G166750--Sobic001G289800 Sobic002G316600 Sobic002G316600 Sobic003G166750--Sobic002G316600 Sobic001G194200 Sobic001G194200 Sobic003G166750--Sobic001G194200 Sobic001G527800 Sobic001G527800 Sobic003G166750--Sobic001G527800 Sobic001G457800 Sobic001G457800 Sobic003G166750--Sobic001G457800 Sobic008G087866--Sobic009G165700 Sobic008G087866--Sobic003G422500 Sobic008G087866--Sobic008G001200 Sobic001G117200 Sobic001G117200 Sobic008G087866--Sobic001G117200 Sobic008G087866--Sobic003G166750 Sobic005G001000 Sobic005G001000 Sobic008G087866--Sobic005G001000 Sobic008G087866--Sobic003G170900 Sobic008G087866--Sobic001G194200 Sobic008G087866--Sobic001G370900 Sobic007G008900 Sobic007G008900 Sobic001G451400--Sobic007G008900 Sobic001G451400--Sobic009G165700 Sobic001G441400 Sobic001G441400 Sobic001G451400--Sobic001G441400 Sobic001G389100 Sobic001G389100 Sobic001G451400--Sobic001G389100 Sobic001G451400--Sobic010G247800 Sobic003G404500 Sobic003G404500 Sobic001G451400--Sobic003G404500 Sobic010G226000 Sobic010G226000 Sobic001G451400--Sobic010G226000 Sobic005G027400 Sobic005G027400 Sobic001G451400--Sobic005G027400 Sobic001G451400--Sobic003G422500 Sobic003G170900--Sobic009G165700 Sobic010G123600 Sobic010G123600 Sobic003G170900--Sobic010G123600 Sobic005G112300 Sobic005G112300 Sobic003G170900--Sobic005G112300 Sobic003G170900--Sobic010G206900 Sobic010G139000 Sobic010G139000 Sobic003G170900--Sobic010G139000 Sobic003G170900--Sobic003G422500 Sobic003G170900--Sobic003G166750 Sobic003G170900--Sobic010G247800 Sobic003G170900--Sobic001G194200 Sobic001G534700--Sobic010G206900 Sobic001G534700--Sobic001G365900 Sobic001G534700--Sobic002G411600 Sobic003G316500 Sobic003G316500 Sobic001G534700--Sobic003G316500 Sobic001G534700--Sobic009G165700 Sobic001G534700--Sobic004G034900 Sobic001G534700--Sobic002G008900 Sobic001G534700--Sobic003G422500 Sobic001G534700--Sobic008G001200 Sobic003G155100 Sobic003G155100 Sobic008G001200--Sobic003G155100 Sobic008G001200--Sobic010G206900 Sobic008G001200--Sobic009G256400 Sobic003G205200 Sobic003G205200 Sobic008G001200--Sobic003G205200 Sobic008G001200--Sobic010G010700 Sobic008G001200--Sobic001G194200 Sobic008G001200--Sobic005G001000 Sobic004G276400 Sobic004G276400 Sobic008G001200--Sobic004G276400 Sobic004G174200 Sobic004G174200 Sobic008G001200--Sobic004G174200
Octagon: transcription factors


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