Gene annotation
Transcriptome id Sobic.003G170900.2,Sobic.003G170900.1
Synonym
Functional annotation -
UniProt C6JRQ3 , A0A1B6Q3S2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.003G170900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G165700 SAC3/GANP family protein, putative, expressed -
2 Sobic.010G123600 WW domain containing protein, expressed -
3 Sobic.005G112300 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
4 Sobic.010G206900 transcription initiation factor TFIID subunit 1, putative, expressed K03125: transcription initiation factor TFIID subunit 1
5 Sobic.010G139000 surp module family protein, putative, expressed K13123: G patch domain-containing protein 1
6 Sobic.003G422500 expressed protein -
7 Sobic.003G166750 - K15188: cyclin T
8 Sobic.010G247800 zinc finger, C3HC4 type domain containing protein, expressed K10696: E3 ubiquitin-protein ligase BRE1
9 Sobic.001G194200 diacylglycerol kinase, putative, expressed -
10 Sobic.008G001200 RNA recognition motif containing protein, putative, expressed -
11 Sobic.002G411600 CW-type Zinc Finger, putative, expressed -
12 Sobic.009G132700 - -
13 Sobic.001G036050 - -
14 Sobic.010G112100 transcription factor jumonji, putative, expressed K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
15 Sobic.001G365900 PWWP domain containing protein, expressed -
16 Sobic.003G313500 MATH domain containing protein, expressed -
17 Sobic.005G008800 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR
18 Sobic.010G010700 PHD-finger family protein, expressed -
19 Sobic.008G087866 - -
20 Sobic.003G196300 DNA binding protein, putative, expressed -


Gene co-expression network
sample Sobic003G170900 Sobic003G170900 Sobic009G165700 Sobic009G165700 Sobic003G170900--Sobic009G165700 Sobic010G123600 Sobic010G123600 Sobic003G170900--Sobic010G123600 Sobic005G112300 Sobic005G112300 Sobic003G170900--Sobic005G112300 Sobic010G206900 Sobic010G206900 Sobic003G170900--Sobic010G206900 Sobic010G139000 Sobic010G139000 Sobic003G170900--Sobic010G139000 Sobic003G422500 Sobic003G422500 Sobic003G170900--Sobic003G422500 Sobic003G166750 Sobic003G166750 Sobic003G170900--Sobic003G166750 Sobic010G247800 Sobic010G247800 Sobic003G170900--Sobic010G247800 Sobic001G194200 Sobic001G194200 Sobic003G170900--Sobic001G194200 Sobic009G165700--Sobic003G422500 Sobic009G165700--Sobic010G247800 Sobic009G165700--Sobic010G206900 Sobic009G165700--Sobic003G166750 Sobic008G087866 Sobic008G087866 Sobic009G165700--Sobic008G087866 Sobic001G451400 Sobic001G451400 Sobic009G165700--Sobic001G451400 Sobic009G165700--Sobic003G170900 Sobic001G534700 Sobic001G534700 Sobic009G165700--Sobic001G534700 Sobic008G001200 Sobic008G001200 Sobic009G165700--Sobic008G001200 Sobic010G010700 Sobic010G010700 Sobic010G123600--Sobic010G010700 Sobic009G256300 Sobic009G256300 Sobic010G123600--Sobic009G256300 Sobic010G123600--Sobic003G170900 Sobic005G167700 Sobic005G167700 Sobic010G123600--Sobic005G167700 Sobic010G123600--Sobic005G112300 Sobic001G433800 Sobic001G433800 Sobic010G123600--Sobic001G433800 Sobic010G112100 Sobic010G112100 Sobic010G123600--Sobic010G112100 Sobic010G123600--Sobic001G194200 Sobic010G123600--Sobic008G001200 Sobic001G363500 Sobic001G363500 Sobic005G112300--Sobic001G363500 Sobic007G062800 Sobic007G062800 Sobic005G112300--Sobic007G062800 Sobic005G112300--Sobic010G112100 Sobic005G112300--Sobic010G139000 Sobic007G105100 Sobic007G105100 Sobic005G112300--Sobic007G105100 Sobic001G540400 Sobic001G540400 Sobic005G112300--Sobic001G540400 Sobic005G112300--Sobic010G010700 Sobic005G008800 Sobic005G008800 Sobic005G112300--Sobic005G008800 Sobic002G071500 Sobic002G071500 Sobic005G112300--Sobic002G071500 Sobic010G206900--Sobic010G010700 Sobic001G365900 Sobic001G365900 Sobic010G206900--Sobic001G365900 Sobic004G034900 Sobic004G034900 Sobic010G206900--Sobic004G034900 Sobic010G206900--Sobic001G534700 Sobic010G206900--Sobic010G247800 Sobic002G411600 Sobic002G411600 Sobic010G206900--Sobic002G411600 Sobic010G206900--Sobic008G001200 Sobic003G196300 Sobic003G196300 Sobic010G206900--Sobic003G196300 Sobic010G206900--Sobic009G165700 Sobic004G314000 Sobic004G314000 Sobic010G139000--Sobic004G314000 Sobic010G139000--Sobic005G112300 Sobic010G279450 Sobic010G279450 Sobic010G139000--Sobic010G279450 Sobic010G139000--Sobic010G206900 Sobic001G311500 Sobic001G311500 Sobic010G139000--Sobic001G311500 Sobic001G036050 Sobic001G036050 Sobic010G139000--Sobic001G036050 Sobic010G139000--Sobic010G112100 Sobic010G139000--Sobic010G010700 Sobic010G139000--Sobic005G008800 Sobic003G422500--Sobic002G411600 Sobic009G191000 Sobic009G191000 Sobic003G422500--Sobic009G191000 Sobic001G289600 Sobic001G289600 Sobic003G422500--Sobic001G289600 Sobic003G422500--Sobic009G165700 Sobic002G008900 Sobic002G008900 Sobic003G422500--Sobic002G008900 Sobic003G422500--Sobic004G034900 Sobic001G289800 Sobic001G289800 Sobic003G422500--Sobic001G289800 Sobic003G422500--Sobic001G540400 Sobic008G132600 Sobic008G132600 Sobic003G422500--Sobic008G132600 Sobic003G166750--Sobic009G165700 Sobic003G166750--Sobic008G001200 Sobic009G256400 Sobic009G256400 Sobic003G166750--Sobic009G256400 Sobic001G370900 Sobic001G370900 Sobic003G166750--Sobic001G370900 Sobic003G166750--Sobic001G289800 Sobic002G316600 Sobic002G316600 Sobic003G166750--Sobic002G316600 Sobic003G166750--Sobic001G194200 Sobic001G527800 Sobic001G527800 Sobic003G166750--Sobic001G527800 Sobic001G457800 Sobic001G457800 Sobic003G166750--Sobic001G457800 Sobic010G247800--Sobic010G206900 Sobic010G247800--Sobic009G165700 Sobic010G247800--Sobic002G411600 Sobic010G247800--Sobic003G422500 Sobic010G247800--Sobic009G191000 Sobic001G002000 Sobic001G002000 Sobic010G247800--Sobic001G002000 Sobic010G247800--Sobic001G363500 Sobic004G291900 Sobic004G291900 Sobic010G247800--Sobic004G291900 Sobic002G405800 Sobic002G405800 Sobic010G247800--Sobic002G405800 Sobic001G194200--Sobic004G291900 Sobic006G055200 Sobic006G055200 Sobic001G194200--Sobic006G055200 Sobic005G001000 Sobic005G001000 Sobic001G194200--Sobic005G001000 Sobic001G194200--Sobic010G010700 Sobic004G276400 Sobic004G276400 Sobic001G194200--Sobic004G276400 Sobic001G194200--Sobic001G289800 Sobic001G194200--Sobic008G001200 Sobic001G194200--Sobic010G206900 Sobic001G194200--Sobic004G034900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.