Gene annotation
Transcriptome id Sobic.001G036050.2,Sobic.001G036050.1
Synonym -
Functional annotation -
UniProt A0A1Z5S4P2 , A0A1Z5S4R8
Pfam PF12660 PF12657
Panther DB PTHR15496 PTHR15496:SF2
NCBI CDD KOG0266; WD40 repeat-containing protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G49400 : Transducin/WD40 repeat-like superfamily protein
RAP-DB (Rice) LOC_Os01g50690.1 : WD domain, G-beta repeat domain containing protein, expressed
MaizeGDB (Corn) Zm00025a008790 , Zm00025a016442
Brachypodium -
Barley HORVU3Hr1G065840.48 , HORVU3Hr1G065840.41 , HORVU3Hr1G065840.52 , HORVU3Hr1G065840.50 , HORVU3Hr1G065840.28 , HORVU3Hr1G065840.26 , HORVU3Hr1G065840.31 , HORVU3Hr1G065840.86 , HORVU3Hr1G065840.10 , HORVU3Hr1G065840.16 , HORVU3Hr1G065840.61 , HORVU3Hr1G065840.77 , HORVU3Hr1G065840.78
Wheat TraesCS3B02G286800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G139000 surp module family protein, putative, expressed K13123: G patch domain-containing protein 1
2 Sobic.001G456900 expressed protein -
3 Sobic.004G096600 - -
4 Sobic.002G133400 CTR1-like protein kinase, putative, expressed K14510: serine/threonine-protein kinase CTR1
5 Sobic.006G216800 AAA family ATPase, putative, expressed K13339: PEX6, peroxin-6
6 Sobic.004G314000 expressed protein -
7 Sobic.004G258700 PHD-finger family protein, expressed -
8 Sobic.010G123600 WW domain containing protein, expressed -
9 Sobic.003G170900 - -
10 Sobic.003G388100 expressed protein -
11 Sobic.001G227200 haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed K00861: RFK, riboflavin kinase
12 Sobic.010G279450 - K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
13 Sobic.005G008800 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR
14 Sobic.001G311500 N-acetylglucosaminyl transferase component, putative, expressed K03860: PIGQ, phosphatidylinositol N-acetylglucosaminyltransferase subunit Q
15 Sobic.005G112300 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
16 Sobic.001G365900 PWWP domain containing protein, expressed -
17 Sobic.008G028700 SET domain containing protein, expressed -
18 Sobic.010G206900 transcription initiation factor TFIID subunit 1, putative, expressed K03125: transcription initiation factor TFIID subunit 1
19 Sobic.002G180666 - -
20 Sobic.007G065400 expressed protein K14400: pre-mRNA cleavage complex 2 protein Pcf11


Gene co-expression network
sample Sobic001G036050 Sobic001G036050 Sobic010G139000 Sobic010G139000 Sobic001G036050--Sobic010G139000 Sobic001G456900 Sobic001G456900 Sobic001G036050--Sobic001G456900 Sobic004G096600 Sobic004G096600 Sobic001G036050--Sobic004G096600 Sobic002G133400 Sobic002G133400 Sobic001G036050--Sobic002G133400 Sobic006G216800 Sobic006G216800 Sobic001G036050--Sobic006G216800 Sobic004G314000 Sobic004G314000 Sobic001G036050--Sobic004G314000 Sobic004G258700 Sobic004G258700 Sobic001G036050--Sobic004G258700 Sobic010G123600 Sobic010G123600 Sobic001G036050--Sobic010G123600 Sobic003G170900 Sobic003G170900 Sobic001G036050--Sobic003G170900 Sobic010G139000--Sobic004G314000 Sobic005G112300 Sobic005G112300 Sobic010G139000--Sobic005G112300 Sobic010G279450 Sobic010G279450 Sobic010G139000--Sobic010G279450 Sobic010G206900 Sobic010G206900 Sobic010G139000--Sobic010G206900 Sobic001G311500 Sobic001G311500 Sobic010G139000--Sobic001G311500 Sobic010G139000--Sobic001G036050 Sobic010G112100 Sobic010G112100 Sobic010G139000--Sobic010G112100 Sobic010G010700 Sobic010G010700 Sobic010G139000--Sobic010G010700 Sobic005G008800 Sobic005G008800 Sobic010G139000--Sobic005G008800 Sobic001G456900--Sobic001G036050 Sobic001G456900--Sobic010G139000 Sobic001G456900--Sobic004G258700 Sobic008G113100 Sobic008G113100 Sobic001G456900--Sobic008G113100 Sobic008G028700 Sobic008G028700 Sobic001G456900--Sobic008G028700 Sobic002G180666 Sobic002G180666 Sobic001G456900--Sobic002G180666 Sobic001G456900--Sobic001G311500 Sobic003G398700 Sobic003G398700 Sobic001G456900--Sobic003G398700 Sobic003G101500 Sobic003G101500 Sobic001G456900--Sobic003G101500 Sobic004G096600--Sobic001G036050 Sobic006G182900 Sobic006G182900 Sobic004G096600--Sobic006G182900 Sobic004G096600--Sobic010G139000 Sobic004G096600--Sobic001G456900 Sobic004G096600--Sobic010G279450 Sobic004G209600 Sobic004G209600 Sobic004G096600--Sobic004G209600 Sobic007G116200 Sobic007G116200 Sobic004G096600--Sobic007G116200 Sobic003G429650 Sobic003G429650 Sobic004G096600--Sobic003G429650 Sobic004G096600--Sobic006G216800 Sobic002G133400--Sobic006G216800 Sobic002G134200 Sobic002G134200 Sobic002G133400--Sobic002G134200 Sobic002G006900 Sobic002G006900 Sobic002G133400--Sobic002G006900 Sobic008G047800 Sobic008G047800 Sobic002G133400--Sobic008G047800 Sobic007G065400 Sobic007G065400 Sobic002G133400--Sobic007G065400 Sobic002G309600 Sobic002G309600 Sobic002G133400--Sobic002G309600 Sobic002G133400--Sobic010G139000 Sobic002G133400--Sobic001G036050 Sobic006G048500 Sobic006G048500 Sobic002G133400--Sobic006G048500 Sobic006G216800--Sobic002G133400 Sobic006G216800--Sobic007G116200 Sobic006G216800--Sobic002G309600 Sobic006G216800--Sobic002G134200 Sobic003G332800 Sobic003G332800 Sobic006G216800--Sobic003G332800 Sobic006G216800--Sobic005G112300 Sobic003G280800 Sobic003G280800 Sobic006G216800--Sobic003G280800 Sobic006G216800--Sobic010G139000 Sobic010G277500 Sobic010G277500 Sobic006G216800--Sobic010G277500 Sobic004G314000--Sobic010G139000 Sobic004G314000--Sobic005G008800 Sobic004G314000--Sobic005G112300 Sobic004G314000--Sobic010G279450 Sobic004G242400 Sobic004G242400 Sobic004G314000--Sobic004G242400 Sobic004G314000--Sobic010G206900 Sobic003G401600 Sobic003G401600 Sobic004G314000--Sobic003G401600 Sobic004G314000--Sobic002G309600 Sobic009G040600 Sobic009G040600 Sobic004G314000--Sobic009G040600 Sobic004G258700--Sobic008G113100 Sobic004G258700--Sobic008G028700 Sobic004G258700--Sobic001G456900 Sobic003G148000 Sobic003G148000 Sobic004G258700--Sobic003G148000 Sobic004G258700--Sobic003G101500 Sobic004G258700--Sobic010G277500 Sobic004G258700--Sobic007G065400 Sobic007G161000 Sobic007G161000 Sobic004G258700--Sobic007G161000 Sobic004G258700--Sobic009G040600 Sobic010G123600--Sobic010G010700 Sobic009G256300 Sobic009G256300 Sobic010G123600--Sobic009G256300 Sobic010G123600--Sobic003G170900 Sobic005G167700 Sobic005G167700 Sobic010G123600--Sobic005G167700 Sobic010G123600--Sobic005G112300 Sobic001G433800 Sobic001G433800 Sobic010G123600--Sobic001G433800 Sobic010G123600--Sobic010G112100 Sobic001G194200 Sobic001G194200 Sobic010G123600--Sobic001G194200 Sobic008G001200 Sobic008G001200 Sobic010G123600--Sobic008G001200 Sobic009G165700 Sobic009G165700 Sobic003G170900--Sobic009G165700 Sobic003G170900--Sobic010G123600 Sobic003G170900--Sobic005G112300 Sobic003G170900--Sobic010G206900 Sobic003G170900--Sobic010G139000 Sobic003G422500 Sobic003G422500 Sobic003G170900--Sobic003G422500 Sobic003G166750 Sobic003G166750 Sobic003G170900--Sobic003G166750 Sobic010G247800 Sobic010G247800 Sobic003G170900--Sobic010G247800 Sobic003G170900--Sobic001G194200
Octagon: transcription factors


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