Gene annotation
Transcriptome id Sobic.003G388100.2,Sobic.003G388100.1,Sobic.003G388100.3
Synonym Sb03g042620
Functional annotation expressed protein
UniProt A0A1W0W0X6 , A0A1B6Q7K6
Pfam -
Panther DB PTHR37766
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G48340 : -
RAP-DB (Rice) LOC_Os01g67170.1 : expressed protein
MaizeGDB (Corn) Zm00025a026437 , Zm00025a048953 , Zm00025a024005 , Zm00025a024004 , Zm00025a048954
Brachypodium KQK11012 , KQK11013 , KQK11014
Barley HORVU3Hr1G089590.1 , HORVU3Hr1G089590.2 , HORVU3Hr1G089590.3 , HORVU3Hr1G089640.1 , HORVU6Hr1G017950.2 , HORVU6Hr1G017950.3 , HORVU6Hr1G017950.1 , HORVU6Hr1G017950.4 , HORVU3Hr1G089640.2 , HORVU3Hr1G089640.3
Wheat TraesCS3A02G398400 , TraesCS3A02G398400 , TraesCS3D02G392400 , TraesCS3D02G392400 , TraesCS3B02G430400 , TraesCS3B02G430400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G001200 RNA recognition motif containing protein, putative, expressed -
2 Sobic.001G454500 potyvirus VPg interacting protein, putative, expressed -
3 Sobic.010G206900 transcription initiation factor TFIID subunit 1, putative, expressed K03125: transcription initiation factor TFIID subunit 1
4 Sobic.001G365900 PWWP domain containing protein, expressed -
5 Sobic.010G123600 WW domain containing protein, expressed -
6 Sobic.003G155100 suppressor of Mek, putative, expressed K17491: SMEK, protein phosphatase 4 regulatory subunit 3
7 Sobic.009G256300 DNA binding protein, putative, expressed -
8 Sobic.003G389200 Rad21 / Rec8 like protein, putative, expressed K06670: SCC1, MCD1, cohesin complex subunit SCC1
9 Sobic.001G230000 expressed protein K10779: transcriptional regulator ATRX
10 Sobic.010G010700 PHD-finger family protein, expressed -
11 Sobic.001G542400 CCR4-Not complex component, Not1domain containing protein, expressed K12604: CNOT1, CCR4-NOT transcription complex subunit 1
12 Sobic.008G044100 expressed protein -
13 Sobic.001G036050 - -
14 Sobic.001G527800 DCL2, putative, expressed K11592: DICER1, endoribonuclease Dicer
15 Sobic.009G053900 HECT-domain domain containing protein, expressed K10589: ubiquitin-protein ligase E3 C
16 Sobic.001G534700 plus-3 domain containing protein, putative, expressed -
17 Sobic.005G008800 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR
18 Sobic.001G194200 diacylglycerol kinase, putative, expressed -
19 Sobic.001G298900 agenet domain containing protein, putative, expressed -
20 Sobic.010G112100 transcription factor jumonji, putative, expressed K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase


Gene co-expression network
sample Sobic003G388100 Sobic003G388100 Sobic008G001200 Sobic008G001200 Sobic003G388100--Sobic008G001200 Sobic001G454500 Sobic001G454500 Sobic003G388100--Sobic001G454500 Sobic010G206900 Sobic010G206900 Sobic003G388100--Sobic010G206900 Sobic001G365900 Sobic001G365900 Sobic003G388100--Sobic001G365900 Sobic010G123600 Sobic010G123600 Sobic003G388100--Sobic010G123600 Sobic003G155100 Sobic003G155100 Sobic003G388100--Sobic003G155100 Sobic009G256300 Sobic009G256300 Sobic003G388100--Sobic009G256300 Sobic003G389200 Sobic003G389200 Sobic003G388100--Sobic003G389200 Sobic001G230000 Sobic001G230000 Sobic003G388100--Sobic001G230000 Sobic008G001200--Sobic003G155100 Sobic008G001200--Sobic010G206900 Sobic009G256400 Sobic009G256400 Sobic008G001200--Sobic009G256400 Sobic003G205200 Sobic003G205200 Sobic008G001200--Sobic003G205200 Sobic010G010700 Sobic010G010700 Sobic008G001200--Sobic010G010700 Sobic001G194200 Sobic001G194200 Sobic008G001200--Sobic001G194200 Sobic005G001000 Sobic005G001000 Sobic008G001200--Sobic005G001000 Sobic004G276400 Sobic004G276400 Sobic008G001200--Sobic004G276400 Sobic004G174200 Sobic004G174200 Sobic008G001200--Sobic004G174200 Sobic001G454500--Sobic003G388100 Sobic008G130100 Sobic008G130100 Sobic001G454500--Sobic008G130100 Sobic006G133900 Sobic006G133900 Sobic001G454500--Sobic006G133900 Sobic001G375100 Sobic001G375100 Sobic001G454500--Sobic001G375100 Sobic001G454500--Sobic001G365900 Sobic001G454500--Sobic008G001200 Sobic001G454500--Sobic010G010700 Sobic001G454500--Sobic003G155100 Sobic003G247500 Sobic003G247500 Sobic001G454500--Sobic003G247500 Sobic010G206900--Sobic010G010700 Sobic010G206900--Sobic001G365900 Sobic004G034900 Sobic004G034900 Sobic010G206900--Sobic004G034900 Sobic001G534700 Sobic001G534700 Sobic010G206900--Sobic001G534700 Sobic010G247800 Sobic010G247800 Sobic010G206900--Sobic010G247800 Sobic002G411600 Sobic002G411600 Sobic010G206900--Sobic002G411600 Sobic010G206900--Sobic008G001200 Sobic003G196300 Sobic003G196300 Sobic010G206900--Sobic003G196300 Sobic009G165700 Sobic009G165700 Sobic010G206900--Sobic009G165700 Sobic001G365900--Sobic010G206900 Sobic001G365900--Sobic001G534700 Sobic001G289600 Sobic001G289600 Sobic001G365900--Sobic001G289600 Sobic001G365900--Sobic008G130100 Sobic001G365900--Sobic002G411600 Sobic002G008900 Sobic002G008900 Sobic001G365900--Sobic002G008900 Sobic009G191000 Sobic009G191000 Sobic001G365900--Sobic009G191000 Sobic001G365900--Sobic004G034900 Sobic001G540400 Sobic001G540400 Sobic001G365900--Sobic001G540400 Sobic010G123600--Sobic010G010700 Sobic010G123600--Sobic009G256300 Sobic003G170900 Sobic003G170900 Sobic010G123600--Sobic003G170900 Sobic005G167700 Sobic005G167700 Sobic010G123600--Sobic005G167700 Sobic005G112300 Sobic005G112300 Sobic010G123600--Sobic005G112300 Sobic001G433800 Sobic001G433800 Sobic010G123600--Sobic001G433800 Sobic010G112100 Sobic010G112100 Sobic010G123600--Sobic010G112100 Sobic010G123600--Sobic001G194200 Sobic010G123600--Sobic008G001200 Sobic003G155100--Sobic008G001200 Sobic006G219600 Sobic006G219600 Sobic003G155100--Sobic006G219600 Sobic003G155100--Sobic010G206900 Sobic003G155100--Sobic001G230000 Sobic003G155100--Sobic001G375100 Sobic003G155100--Sobic001G194200 Sobic003G155100--Sobic010G010700 Sobic003G155100--Sobic009G256400 Sobic004G291900 Sobic004G291900 Sobic003G155100--Sobic004G291900 Sobic009G256300--Sobic010G112100 Sobic009G256300--Sobic003G389200 Sobic004G242400 Sobic004G242400 Sobic009G256300--Sobic004G242400 Sobic009G256300--Sobic010G010700 Sobic009G256300--Sobic010G123600 Sobic003G360400 Sobic003G360400 Sobic009G256300--Sobic003G360400 Sobic009G109200 Sobic009G109200 Sobic009G256300--Sobic009G109200 Sobic009G256300--Sobic004G276400 Sobic001G542400 Sobic001G542400 Sobic009G256300--Sobic001G542400 Sobic003G389200--Sobic009G256300 Sobic003G389200--Sobic010G206900 Sobic003G389200--Sobic003G360400 Sobic003G389200--Sobic010G112100 Sobic003G389200--Sobic010G010700 Sobic003G389200--Sobic001G365900 Sobic003G389200--Sobic001G540400 Sobic007G105100 Sobic007G105100 Sobic003G389200--Sobic007G105100 Sobic003G389200--Sobic001G230000 Sobic001G230000--Sobic010G206900 Sobic001G230000--Sobic003G155100 Sobic001G230000--Sobic008G001200 Sobic001G230000--Sobic004G276400 Sobic004G223000 Sobic004G223000 Sobic001G230000--Sobic004G223000 Sobic001G230000--Sobic009G256300 Sobic001G230000--Sobic010G010700 Sobic001G298900 Sobic001G298900 Sobic001G230000--Sobic001G298900 Sobic008G044100 Sobic008G044100 Sobic001G230000--Sobic008G044100
Octagon: transcription factors


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