Gene annotation
Transcriptome id Sobic.008G044100.1
Synonym Sb08g003780, FAR1
Functional annotation expressed protein
UniProt C5YS77
Pfam PF04434 PF10551 PF03101
Panther DB PTHR31669 PTHR31669:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0006355regulation of transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT4G15090 : FRS (FAR1 Related Sequences) transcription factor family
RAP-DB (Rice) LOC_Os12g06380.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) -
Brachypodium KQJ92157
Barley HORVU5Hr1G010730.1 , HORVU5Hr1G010730.2 , HORVU5Hr1G010730.3 , HORVU5Hr1G010730.4 , HORVU5Hr1G010730.5 , HORVU5Hr1G010730.6
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G010700 PHD-finger family protein, expressed -
2 Sobic.004G134200 GTP binding protein, putative, expressed -
3 Sobic.001G374100 jmjC domain containing protein, expressed K15601: [histone H3]-dimethyl-L-lysine9 demethylase
4 Sobic.003G155100 suppressor of Mek, putative, expressed K17491: SMEK, protein phosphatase 4 regulatory subunit 3
5 Sobic.010G206900 transcription initiation factor TFIID subunit 1, putative, expressed K03125: transcription initiation factor TFIID subunit 1
6 Sobic.001G230000 expressed protein K10779: transcriptional regulator ATRX
7 Sobic.008G001200 RNA recognition motif containing protein, putative, expressed -
8 Sobic.003G389200 Rad21 / Rec8 like protein, putative, expressed K06670: SCC1, MCD1, cohesin complex subunit SCC1
9 Sobic.002G316600 expressed protein -
10 Sobic.010G123600 WW domain containing protein, expressed -
11 Sobic.009G256300 DNA binding protein, putative, expressed -
12 Sobic.009G215500 transcription initiation factor IIB, putative, expressed K15196: BRF1, transcription factor IIIB 90 kDa subunit
13 Sobic.003G168100 BZIP protein, putative, expressed -
14 Sobic.001G298900 agenet domain containing protein, putative, expressed -
15 Sobic.003G388100 expressed protein -
16 Sobic.001G194200 diacylglycerol kinase, putative, expressed -
17 Sobic.002G344000 expressed protein -
18 Sobic.010G126000 WD-40 repeat family protein, putative, expressed -
19 Sobic.003G398700 expressed protein K15210: snRNA-activating protein complex subunit 3
20 Sobic.001G456900 expressed protein -


Gene co-expression network
sample Sobic008G044100 Sobic008G044100 Sobic010G010700 Sobic010G010700 Sobic008G044100--Sobic010G010700 Sobic004G134200 Sobic004G134200 Sobic008G044100--Sobic004G134200 Sobic001G374100 Sobic001G374100 Sobic008G044100--Sobic001G374100 Sobic003G155100 Sobic003G155100 Sobic008G044100--Sobic003G155100 Sobic010G206900 Sobic010G206900 Sobic008G044100--Sobic010G206900 Sobic001G230000 Sobic001G230000 Sobic008G044100--Sobic001G230000 Sobic008G001200 Sobic008G001200 Sobic008G044100--Sobic008G001200 Sobic003G389200 Sobic003G389200 Sobic008G044100--Sobic003G389200 Sobic002G316600 Sobic002G316600 Sobic008G044100--Sobic002G316600 Sobic010G010700--Sobic010G206900 Sobic004G034900 Sobic004G034900 Sobic010G010700--Sobic004G034900 Sobic004G276400 Sobic004G276400 Sobic010G010700--Sobic004G276400 Sobic001G194200 Sobic001G194200 Sobic010G010700--Sobic001G194200 Sobic007G062800 Sobic007G062800 Sobic010G010700--Sobic007G062800 Sobic002G008900 Sobic002G008900 Sobic010G010700--Sobic002G008900 Sobic005G112300 Sobic005G112300 Sobic010G010700--Sobic005G112300 Sobic010G010700--Sobic008G001200 Sobic003G186000 Sobic003G186000 Sobic010G010700--Sobic003G186000 Sobic004G134200--Sobic008G044100 Sobic004G134200--Sobic001G374100 Sobic009G256300 Sobic009G256300 Sobic004G134200--Sobic009G256300 Sobic004G134200--Sobic010G010700 Sobic009G215500 Sobic009G215500 Sobic004G134200--Sobic009G215500 Sobic004G134200--Sobic001G194200 Sobic004G134200--Sobic004G276400 Sobic003G011300 Sobic003G011300 Sobic004G134200--Sobic003G011300 Sobic001G172700 Sobic001G172700 Sobic004G134200--Sobic001G172700 Sobic001G374100--Sobic008G044100 Sobic001G374100--Sobic004G134200 Sobic001G374100--Sobic010G010700 Sobic001G374100--Sobic003G155100 Sobic006G252900 Sobic006G252900 Sobic001G374100--Sobic006G252900 Sobic001G374100--Sobic003G011300 Sobic001G374100--Sobic008G001200 Sobic006G259800 Sobic006G259800 Sobic001G374100--Sobic006G259800 Sobic001G456900 Sobic001G456900 Sobic001G374100--Sobic001G456900 Sobic003G155100--Sobic008G001200 Sobic006G219600 Sobic006G219600 Sobic003G155100--Sobic006G219600 Sobic003G155100--Sobic010G206900 Sobic003G155100--Sobic001G230000 Sobic001G375100 Sobic001G375100 Sobic003G155100--Sobic001G375100 Sobic003G155100--Sobic001G194200 Sobic003G155100--Sobic010G010700 Sobic009G256400 Sobic009G256400 Sobic003G155100--Sobic009G256400 Sobic004G291900 Sobic004G291900 Sobic003G155100--Sobic004G291900 Sobic010G206900--Sobic010G010700 Sobic001G365900 Sobic001G365900 Sobic010G206900--Sobic001G365900 Sobic010G206900--Sobic004G034900 Sobic001G534700 Sobic001G534700 Sobic010G206900--Sobic001G534700 Sobic010G247800 Sobic010G247800 Sobic010G206900--Sobic010G247800 Sobic002G411600 Sobic002G411600 Sobic010G206900--Sobic002G411600 Sobic010G206900--Sobic008G001200 Sobic003G196300 Sobic003G196300 Sobic010G206900--Sobic003G196300 Sobic009G165700 Sobic009G165700 Sobic010G206900--Sobic009G165700 Sobic001G230000--Sobic010G206900 Sobic001G230000--Sobic003G155100 Sobic001G230000--Sobic008G001200 Sobic001G230000--Sobic004G276400 Sobic004G223000 Sobic004G223000 Sobic001G230000--Sobic004G223000 Sobic001G230000--Sobic009G256300 Sobic001G230000--Sobic010G010700 Sobic001G298900 Sobic001G298900 Sobic001G230000--Sobic001G298900 Sobic001G230000--Sobic008G044100 Sobic008G001200--Sobic003G155100 Sobic008G001200--Sobic010G206900 Sobic008G001200--Sobic009G256400 Sobic003G205200 Sobic003G205200 Sobic008G001200--Sobic003G205200 Sobic008G001200--Sobic010G010700 Sobic008G001200--Sobic001G194200 Sobic005G001000 Sobic005G001000 Sobic008G001200--Sobic005G001000 Sobic008G001200--Sobic004G276400 Sobic004G174200 Sobic004G174200 Sobic008G001200--Sobic004G174200 Sobic003G389200--Sobic009G256300 Sobic003G389200--Sobic010G206900 Sobic003G360400 Sobic003G360400 Sobic003G389200--Sobic003G360400 Sobic010G112100 Sobic010G112100 Sobic003G389200--Sobic010G112100 Sobic003G389200--Sobic010G010700 Sobic003G389200--Sobic001G365900 Sobic001G540400 Sobic001G540400 Sobic003G389200--Sobic001G540400 Sobic007G105100 Sobic007G105100 Sobic003G389200--Sobic007G105100 Sobic003G389200--Sobic001G230000 Sobic007G103100 Sobic007G103100 Sobic002G316600--Sobic007G103100 Sobic001G527800 Sobic001G527800 Sobic002G316600--Sobic001G527800 Sobic002G316600--Sobic003G186000 Sobic002G316600--Sobic004G276400 Sobic001G529600 Sobic001G529600 Sobic002G316600--Sobic001G529600 Sobic003G166750 Sobic003G166750 Sobic002G316600--Sobic003G166750 Sobic002G316600--Sobic001G194200 Sobic001G289800 Sobic001G289800 Sobic002G316600--Sobic001G289800 Sobic010G079500 Sobic010G079500 Sobic002G316600--Sobic010G079500
Octagon: transcription factors


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