Gene annotation
Transcriptome id Sobic.010G206900.1
Synonym HAC13, HAF1, Sb10g025390, TAF1, HAF01, GTD1
Functional annotation transcription initiation factor TFIID subunit 1, putative, expressed
UniProt C5Z6R1
Pfam PF09247 PF00439 PF12157
Panther DB PTHR13900 PTHR13900:SF0
NCBI CDD -
KEGG Orthology K03125; transcription initiation factor TFIID subunit 1
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G32750 : HAC13 protein (HAC13)
RAP-DB (Rice) LOC_Os06g43790.1 : transcription initiation factor TFIID subunit 1, putative, expressed
MaizeGDB (Corn) Zm00025a051372
Brachypodium PNT75345
Barley HORVU7Hr1G115120.17 , HORVU7Hr1G115120.40 , HORVU7Hr1G115120.41 , HORVU7Hr1G115120.42 , HORVU7Hr1G115120.43 , HORVU7Hr1G115120.44 , HORVU7Hr1G115120.45 , HORVU7Hr1G115120.46 , HORVU7Hr1G115120.47 , HORVU7Hr1G115120.48 , HORVU7Hr1G115120.49 , HORVU7Hr1G115120.31 , HORVU7Hr1G115120.30 , HORVU7Hr1G115120.33 , HORVU7Hr1G115120.32 , HORVU7Hr1G115120.35 , HORVU7Hr1G115120.34 , HORVU7Hr1G115120.37 , HORVU7Hr1G115120.36 , HORVU7Hr1G115120.39 , HORVU7Hr1G115120.38 , HORVU7Hr1G115120.7 , HORVU7Hr1G115120.6 , HORVU7Hr1G115120.5 , HORVU7Hr1G115120.4 , HORVU7Hr1G115120.3 , HORVU7Hr1G115120.2 , HORVU7Hr1G115120.1 , HORVU7Hr1G115120.9 , HORVU7Hr1G115120.8 , HORVU7Hr1G115120.15 , HORVU7Hr1G115120.14 , HORVU7Hr1G115120.13 , HORVU7Hr1G115120.12 , HORVU7Hr1G115120.11 , HORVU7Hr1G115120.10 , HORVU7Hr1G115120.26 , HORVU7Hr1G115120.27 , HORVU7Hr1G115120.24 , HORVU7Hr1G115120.25 , HORVU7Hr1G115120.22 , HORVU7Hr1G115120.23 , HORVU7Hr1G115120.20 , HORVU7Hr1G115120.21 , HORVU7Hr1G115120.28 , HORVU7Hr1G115120.29 , HORVU7Hr1G115120.53 , HORVU7Hr1G115120.52 , HORVU7Hr1G115120.51 , HORVU7Hr1G115120.50 , HORVU7Hr1G115120.56 , HORVU7Hr1G115120.55 , HORVU7Hr1G115120.54 , HORVU7Hr1G115120.19 , HORVU7Hr1G115120.18
Wheat TraesCS7A02G515000 , TraesCS7A02G515000 , TraesCS7A02G514800 , TraesCS7A02G514800 , TraesCS7B02G431500 , TraesCS7B02G431500 , TraesCS7B02G431500 , TraesCS7B02G431500 , TraesCS7D02G505200 , TraesCS7D02G505400 , TraesCS7D02G505400 , TraesCS7B02G431700 , TraesCS7B02G431700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G010700 PHD-finger family protein, expressed -
2 Sobic.001G365900 PWWP domain containing protein, expressed -
3 Sobic.004G034900 histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
4 Sobic.001G534700 plus-3 domain containing protein, putative, expressed -
5 Sobic.010G247800 zinc finger, C3HC4 type domain containing protein, expressed K10696: E3 ubiquitin-protein ligase BRE1
6 Sobic.002G411600 CW-type Zinc Finger, putative, expressed -
7 Sobic.008G001200 RNA recognition motif containing protein, putative, expressed -
8 Sobic.003G196300 DNA binding protein, putative, expressed -
9 Sobic.009G165700 SAC3/GANP family protein, putative, expressed -
10 Sobic.003G155100 suppressor of Mek, putative, expressed K17491: SMEK, protein phosphatase 4 regulatory subunit 3
11 Sobic.003G422500 expressed protein -
12 Sobic.001G194200 diacylglycerol kinase, putative, expressed -
13 Sobic.001G230000 expressed protein K10779: transcriptional regulator ATRX
14 Sobic.007G062800 SET domain containing protein, expressed -
15 Sobic.002G008900 sister chromatid cohesion 2, putative, expressed K06672: SCC2, cohesin loading factor subunit SCC2
16 Sobic.010G139000 surp module family protein, putative, expressed K13123: G patch domain-containing protein 1
17 Sobic.001G540400 expressed protein -
18 Sobic.004G174200 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12813: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
19 Sobic.004G291900 ESP4, putative, expressed K06100: symplekin
20 Sobic.003G389200 Rad21 / Rec8 like protein, putative, expressed K06670: SCC1, MCD1, cohesin complex subunit SCC1


Gene co-expression network
sample Sobic010G206900 Sobic010G206900 Sobic010G010700 Sobic010G010700 Sobic010G206900--Sobic010G010700 Sobic001G365900 Sobic001G365900 Sobic010G206900--Sobic001G365900 Sobic004G034900 Sobic004G034900 Sobic010G206900--Sobic004G034900 Sobic001G534700 Sobic001G534700 Sobic010G206900--Sobic001G534700 Sobic010G247800 Sobic010G247800 Sobic010G206900--Sobic010G247800 Sobic002G411600 Sobic002G411600 Sobic010G206900--Sobic002G411600 Sobic008G001200 Sobic008G001200 Sobic010G206900--Sobic008G001200 Sobic003G196300 Sobic003G196300 Sobic010G206900--Sobic003G196300 Sobic009G165700 Sobic009G165700 Sobic010G206900--Sobic009G165700 Sobic010G010700--Sobic010G206900 Sobic010G010700--Sobic004G034900 Sobic004G276400 Sobic004G276400 Sobic010G010700--Sobic004G276400 Sobic001G194200 Sobic001G194200 Sobic010G010700--Sobic001G194200 Sobic007G062800 Sobic007G062800 Sobic010G010700--Sobic007G062800 Sobic002G008900 Sobic002G008900 Sobic010G010700--Sobic002G008900 Sobic005G112300 Sobic005G112300 Sobic010G010700--Sobic005G112300 Sobic010G010700--Sobic008G001200 Sobic003G186000 Sobic003G186000 Sobic010G010700--Sobic003G186000 Sobic001G365900--Sobic010G206900 Sobic001G365900--Sobic001G534700 Sobic001G289600 Sobic001G289600 Sobic001G365900--Sobic001G289600 Sobic008G130100 Sobic008G130100 Sobic001G365900--Sobic008G130100 Sobic001G365900--Sobic002G411600 Sobic001G365900--Sobic002G008900 Sobic009G191000 Sobic009G191000 Sobic001G365900--Sobic009G191000 Sobic001G365900--Sobic004G034900 Sobic001G540400 Sobic001G540400 Sobic001G365900--Sobic001G540400 Sobic004G034900--Sobic001G289600 Sobic004G034900--Sobic010G206900 Sobic004G034900--Sobic010G010700 Sobic004G034900--Sobic002G411600 Sobic004G034900--Sobic001G540400 Sobic003G422500 Sobic003G422500 Sobic004G034900--Sobic003G422500 Sobic004G034900--Sobic004G276400 Sobic004G034900--Sobic002G008900 Sobic004G034900--Sobic007G062800 Sobic001G534700--Sobic010G206900 Sobic001G534700--Sobic001G365900 Sobic001G534700--Sobic002G411600 Sobic003G316500 Sobic003G316500 Sobic001G534700--Sobic003G316500 Sobic001G534700--Sobic009G165700 Sobic001G534700--Sobic004G034900 Sobic001G534700--Sobic002G008900 Sobic001G534700--Sobic003G422500 Sobic001G534700--Sobic008G001200 Sobic010G247800--Sobic010G206900 Sobic010G247800--Sobic009G165700 Sobic010G247800--Sobic002G411600 Sobic010G247800--Sobic003G422500 Sobic010G247800--Sobic009G191000 Sobic001G002000 Sobic001G002000 Sobic010G247800--Sobic001G002000 Sobic001G363500 Sobic001G363500 Sobic010G247800--Sobic001G363500 Sobic004G291900 Sobic004G291900 Sobic010G247800--Sobic004G291900 Sobic002G405800 Sobic002G405800 Sobic010G247800--Sobic002G405800 Sobic002G411600--Sobic009G191000 Sobic002G411600--Sobic003G422500 Sobic002G411600--Sobic010G206900 Sobic002G411600--Sobic002G008900 Sobic002G411600--Sobic004G034900 Sobic004G174200 Sobic004G174200 Sobic002G411600--Sobic004G174200 Sobic002G411600--Sobic010G247800 Sobic002G411600--Sobic001G534700 Sobic003G101400 Sobic003G101400 Sobic002G411600--Sobic003G101400 Sobic003G155100 Sobic003G155100 Sobic008G001200--Sobic003G155100 Sobic008G001200--Sobic010G206900 Sobic009G256400 Sobic009G256400 Sobic008G001200--Sobic009G256400 Sobic003G205200 Sobic003G205200 Sobic008G001200--Sobic003G205200 Sobic008G001200--Sobic010G010700 Sobic008G001200--Sobic001G194200 Sobic005G001000 Sobic005G001000 Sobic008G001200--Sobic005G001000 Sobic008G001200--Sobic004G276400 Sobic008G001200--Sobic004G174200 Sobic003G196300--Sobic010G206900 Sobic003G196300--Sobic004G034900 Sobic003G196300--Sobic001G194200 Sobic007G063000 Sobic007G063000 Sobic003G196300--Sobic007G063000 Sobic001G289800 Sobic001G289800 Sobic003G196300--Sobic001G289800 Sobic003G196300--Sobic004G276400 Sobic003G196300--Sobic010G247800 Sobic009G256300 Sobic009G256300 Sobic003G196300--Sobic009G256300 Sobic003G196300--Sobic001G534700 Sobic009G165700--Sobic003G422500 Sobic009G165700--Sobic010G247800 Sobic009G165700--Sobic010G206900 Sobic003G166750 Sobic003G166750 Sobic009G165700--Sobic003G166750 Sobic008G087866 Sobic008G087866 Sobic009G165700--Sobic008G087866 Sobic001G451400 Sobic001G451400 Sobic009G165700--Sobic001G451400 Sobic003G170900 Sobic003G170900 Sobic009G165700--Sobic003G170900 Sobic009G165700--Sobic001G534700 Sobic009G165700--Sobic008G001200
Octagon: transcription factors


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