Gene annotation
Transcriptome id Sobic.003G422500.1
Synonym Sb03g045540
Functional annotation expressed protein
UniProt A0A1B6Q860
Pfam -
Panther DB PTHR31115 PTHR31115:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G19390 : -
RAP-DB (Rice) LOC_Os05g28300.1 : expressed protein
MaizeGDB (Corn) Zm00025a026058
Brachypodium KQK06788 , KQK06790
Barley HORVU1Hr1G060010.8 , HORVU1Hr1G060010.18 , HORVU1Hr1G060010.19 , HORVU1Hr1G060010.10 , HORVU1Hr1G060010.11 , HORVU1Hr1G060010.12 , HORVU1Hr1G060010.13 , HORVU1Hr1G060010.14 , HORVU1Hr1G060010.15 , HORVU1Hr1G060010.16 , HORVU1Hr1G060010.17 , HORVU1Hr1G060010.20 , HORVU1Hr1G060010.9 , HORVU1Hr1G060010.2 , HORVU1Hr1G060010.3 , HORVU1Hr1G060010.1 , HORVU1Hr1G060010.6 , HORVU1Hr1G060010.7 , HORVU1Hr1G060010.4 , HORVU1Hr1G060010.5
Wheat TraesCS1A02G223700 , TraesCS1B02G237000 , TraesCS1B02G237000 , TraesCS1A02G223700 , TraesCS1D02G225300 , TraesCS1D02G225300 , TraesCS1D02G225300
Populus -


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cDNA sequences
Sobic.003G422500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G411600 CW-type Zinc Finger, putative, expressed -
2 Sobic.009G191000 MATH domain containing protein, expressed -
3 Sobic.001G289600 BAH domain containing protein, putative, expressed -
4 Sobic.009G165700 SAC3/GANP family protein, putative, expressed -
5 Sobic.002G008900 sister chromatid cohesion 2, putative, expressed K06672: SCC2, cohesin loading factor subunit SCC2
6 Sobic.004G034900 histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
7 Sobic.001G289800 BAH domain containing protein, putative, expressed -
8 Sobic.001G540400 expressed protein -
9 Sobic.008G132600 expressed protein -
10 Sobic.010G206900 transcription initiation factor TFIID subunit 1, putative, expressed K03125: transcription initiation factor TFIID subunit 1
11 Sobic.003G101400 transcriptional repressor, putative, expressed K11644: paired amphipathic helix protein Sin3a
12 Sobic.005G001000 RNA recognition motif containing protein, putative, expressed K10643: CNOT4, NOT4, CCR4-NOT transcription complex subunit 4
13 Sobic.007G062800 SET domain containing protein, expressed -
14 Sobic.009G053900 HECT-domain domain containing protein, expressed K10589: ubiquitin-protein ligase E3 C
15 Sobic.001G194200 diacylglycerol kinase, putative, expressed -
16 Sobic.010G247800 zinc finger, C3HC4 type domain containing protein, expressed K10696: E3 ubiquitin-protein ligase BRE1
17 Sobic.003G313500 MATH domain containing protein, expressed -
18 Sobic.001G002000 protein kinase domain containing protein, expressed -
19 Sobic.010G010700 PHD-finger family protein, expressed -
20 Sobic.005G112300 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11


Gene co-expression network
sample Sobic003G422500 Sobic003G422500 Sobic002G411600 Sobic002G411600 Sobic003G422500--Sobic002G411600 Sobic009G191000 Sobic009G191000 Sobic003G422500--Sobic009G191000 Sobic001G289600 Sobic001G289600 Sobic003G422500--Sobic001G289600 Sobic009G165700 Sobic009G165700 Sobic003G422500--Sobic009G165700 Sobic002G008900 Sobic002G008900 Sobic003G422500--Sobic002G008900 Sobic004G034900 Sobic004G034900 Sobic003G422500--Sobic004G034900 Sobic001G289800 Sobic001G289800 Sobic003G422500--Sobic001G289800 Sobic001G540400 Sobic001G540400 Sobic003G422500--Sobic001G540400 Sobic008G132600 Sobic008G132600 Sobic003G422500--Sobic008G132600 Sobic002G411600--Sobic009G191000 Sobic002G411600--Sobic003G422500 Sobic010G206900 Sobic010G206900 Sobic002G411600--Sobic010G206900 Sobic002G411600--Sobic002G008900 Sobic002G411600--Sobic004G034900 Sobic004G174200 Sobic004G174200 Sobic002G411600--Sobic004G174200 Sobic010G247800 Sobic010G247800 Sobic002G411600--Sobic010G247800 Sobic001G534700 Sobic001G534700 Sobic002G411600--Sobic001G534700 Sobic003G101400 Sobic003G101400 Sobic002G411600--Sobic003G101400 Sobic009G191000--Sobic002G008900 Sobic009G191000--Sobic002G411600 Sobic009G191000--Sobic003G422500 Sobic009G053900 Sobic009G053900 Sobic009G191000--Sobic009G053900 Sobic009G191000--Sobic001G289600 Sobic003G313500 Sobic003G313500 Sobic009G191000--Sobic003G313500 Sobic009G191000--Sobic010G247800 Sobic009G191000--Sobic004G034900 Sobic001G365900 Sobic001G365900 Sobic009G191000--Sobic001G365900 Sobic001G289600--Sobic001G540400 Sobic001G289600--Sobic004G034900 Sobic001G289600--Sobic001G289800 Sobic001G289600--Sobic003G422500 Sobic001G289600--Sobic001G365900 Sobic001G289600--Sobic009G191000 Sobic005G008800 Sobic005G008800 Sobic001G289600--Sobic005G008800 Sobic007G105100 Sobic007G105100 Sobic001G289600--Sobic007G105100 Sobic010G010700 Sobic010G010700 Sobic001G289600--Sobic010G010700 Sobic009G165700--Sobic003G422500 Sobic009G165700--Sobic010G247800 Sobic009G165700--Sobic010G206900 Sobic003G166750 Sobic003G166750 Sobic009G165700--Sobic003G166750 Sobic008G087866 Sobic008G087866 Sobic009G165700--Sobic008G087866 Sobic001G451400 Sobic001G451400 Sobic009G165700--Sobic001G451400 Sobic003G170900 Sobic003G170900 Sobic009G165700--Sobic003G170900 Sobic009G165700--Sobic001G534700 Sobic008G001200 Sobic008G001200 Sobic009G165700--Sobic008G001200 Sobic002G008900--Sobic009G191000 Sobic002G008900--Sobic002G411600 Sobic007G062800 Sobic007G062800 Sobic002G008900--Sobic007G062800 Sobic002G008900--Sobic003G422500 Sobic005G001000 Sobic005G001000 Sobic002G008900--Sobic005G001000 Sobic002G008900--Sobic010G010700 Sobic002G008900--Sobic004G034900 Sobic002G008900--Sobic010G206900 Sobic002G008900--Sobic009G053900 Sobic004G034900--Sobic001G289600 Sobic004G034900--Sobic010G206900 Sobic004G034900--Sobic010G010700 Sobic004G034900--Sobic002G411600 Sobic004G034900--Sobic001G540400 Sobic004G034900--Sobic003G422500 Sobic004G276400 Sobic004G276400 Sobic004G034900--Sobic004G276400 Sobic004G034900--Sobic002G008900 Sobic004G034900--Sobic007G062800 Sobic001G289800--Sobic001G289600 Sobic001G289800--Sobic003G422500 Sobic001G194200 Sobic001G194200 Sobic001G289800--Sobic001G194200 Sobic004G291900 Sobic004G291900 Sobic001G289800--Sobic004G291900 Sobic001G289800--Sobic004G034900 Sobic001G002000 Sobic001G002000 Sobic001G289800--Sobic001G002000 Sobic001G289800--Sobic010G010700 Sobic001G289800--Sobic007G062800 Sobic001G289800--Sobic005G001000 Sobic001G540400--Sobic001G289600 Sobic003G408600 Sobic003G408600 Sobic001G540400--Sobic003G408600 Sobic001G540400--Sobic007G062800 Sobic001G540400--Sobic005G008800 Sobic001G540400--Sobic004G034900 Sobic005G112300 Sobic005G112300 Sobic001G540400--Sobic005G112300 Sobic001G540400--Sobic003G422500 Sobic002G397500 Sobic002G397500 Sobic001G540400--Sobic002G397500 Sobic010G112100 Sobic010G112100 Sobic001G540400--Sobic010G112100 Sobic008G132600--Sobic003G101400 Sobic008G132600--Sobic003G422500 Sobic008G132600--Sobic002G411600 Sobic003G229500 Sobic003G229500 Sobic008G132600--Sobic003G229500 Sobic008G132600--Sobic009G191000 Sobic009G027300 Sobic009G027300 Sobic008G132600--Sobic009G027300 Sobic008G132600--Sobic007G062800 Sobic008G132600--Sobic002G008900 Sobic008G132600--Sobic010G247800
Octagon: transcription factors


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