Gene annotation
Transcriptome id Sobic.003G313500.1
Synonym Sb03g036140
Functional annotation MATH domain containing protein, expressed
UniProt C5XLL7
Pfam PF00917
Panther DB PTHR24006
NCBI CDD KOG2341; TATA box binding protein (TBP)-associated factor, RNA polymerase II
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G04300 : TRAF-like superfamily protein
RAP-DB (Rice) LOC_Os01g56800.3 : MATH domain containing protein, expressed
MaizeGDB (Corn) Zm00025a037909 , Zm00025a044172 , Zm00025a027335 , Zm00025a025247 , Zm00025a004566 , Zm00025a004564
Brachypodium KQK05507 , KQK05506 , KQK05505 , KQK05504 , PNT72960 , KQK10017 , PNT70952 , PNT70951 , PNT72959
Barley HORVU1Hr1G078170.10 , HORVU1Hr1G078170.8 , HORVU1Hr1G078170.9 , HORVU1Hr1G078170.2 , HORVU1Hr1G078170.5 , HORVU1Hr1G078170.6 , HORVU1Hr1G078170.7 , HORVU3Hr1G075800.11 , HORVU3Hr1G075800.10 , HORVU3Hr1G075800.13 , HORVU3Hr1G075800.12 , HORVU3Hr1G075800.15 , HORVU3Hr1G075800.14 , HORVU3Hr1G075800.16 , HORVU3Hr1G075800.9 , HORVU3Hr1G075800.8 , HORVU3Hr1G075800.5 , HORVU3Hr1G075800.4 , HORVU3Hr1G075800.7 , HORVU3Hr1G075800.6 , HORVU3Hr1G075800.3
Wheat TraesCS1B02G339200 , TraesCS1B02G339200 , TraesCS3B02G343300 , TraesCS3B02G343300 , TraesCS1D02G327700 , TraesCS3D02G310000 , TraesCS1A02G325900 , TraesCS1A02G325900 , TraesCS3D02G310000 , TraesCS3A02G321300 , TraesCS3A02G321300
Populus -


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cDNA sequences
Sobic.003G313500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G191000 MATH domain containing protein, expressed -
2 Sobic.003G422500 expressed protein -
3 Sobic.002G411600 CW-type Zinc Finger, putative, expressed -
4 Sobic.001G540400 expressed protein -
5 Sobic.004G034900 histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
6 Sobic.001G289600 BAH domain containing protein, putative, expressed -
7 Sobic.009G053900 HECT-domain domain containing protein, expressed K10589: ubiquitin-protein ligase E3 C
8 Sobic.002G008900 sister chromatid cohesion 2, putative, expressed K06672: SCC2, cohesin loading factor subunit SCC2
9 Sobic.001G365900 PWWP domain containing protein, expressed -
10 Sobic.010G139600 STE_PAK_Ste20_STLK.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
11 Sobic.001G534700 plus-3 domain containing protein, putative, expressed -
12 Sobic.007G075400 expressed protein -
13 Sobic.003G196300 DNA binding protein, putative, expressed -
14 Sobic.001G194200 diacylglycerol kinase, putative, expressed -
15 Sobic.010G206900 transcription initiation factor TFIID subunit 1, putative, expressed K03125: transcription initiation factor TFIID subunit 1
16 Sobic.001G289800 BAH domain containing protein, putative, expressed -
17 Sobic.009G165700 SAC3/GANP family protein, putative, expressed -
18 Sobic.003G205200 expressed protein K19027: zinc finger FYVE domain-containing protein 26
19 Sobic.001G390800 transcription factor HBP-1b, putative, expressed K14431: transcription factor TGA
20 Sobic.003G118200 phosphoadenosine phosphosulfate, putative, expressed -


Gene co-expression network
sample Sobic003G313500 Sobic003G313500 Sobic009G191000 Sobic009G191000 Sobic003G313500--Sobic009G191000 Sobic003G422500 Sobic003G422500 Sobic003G313500--Sobic003G422500 Sobic002G411600 Sobic002G411600 Sobic003G313500--Sobic002G411600 Sobic001G540400 Sobic001G540400 Sobic003G313500--Sobic001G540400 Sobic004G034900 Sobic004G034900 Sobic003G313500--Sobic004G034900 Sobic001G289600 Sobic001G289600 Sobic003G313500--Sobic001G289600 Sobic009G053900 Sobic009G053900 Sobic003G313500--Sobic009G053900 Sobic002G008900 Sobic002G008900 Sobic003G313500--Sobic002G008900 Sobic001G365900 Sobic001G365900 Sobic003G313500--Sobic001G365900 Sobic009G191000--Sobic002G008900 Sobic009G191000--Sobic002G411600 Sobic009G191000--Sobic003G422500 Sobic009G191000--Sobic009G053900 Sobic009G191000--Sobic001G289600 Sobic009G191000--Sobic003G313500 Sobic010G247800 Sobic010G247800 Sobic009G191000--Sobic010G247800 Sobic009G191000--Sobic004G034900 Sobic009G191000--Sobic001G365900 Sobic003G422500--Sobic002G411600 Sobic003G422500--Sobic009G191000 Sobic003G422500--Sobic001G289600 Sobic009G165700 Sobic009G165700 Sobic003G422500--Sobic009G165700 Sobic003G422500--Sobic002G008900 Sobic003G422500--Sobic004G034900 Sobic001G289800 Sobic001G289800 Sobic003G422500--Sobic001G289800 Sobic003G422500--Sobic001G540400 Sobic008G132600 Sobic008G132600 Sobic003G422500--Sobic008G132600 Sobic002G411600--Sobic009G191000 Sobic002G411600--Sobic003G422500 Sobic010G206900 Sobic010G206900 Sobic002G411600--Sobic010G206900 Sobic002G411600--Sobic002G008900 Sobic002G411600--Sobic004G034900 Sobic004G174200 Sobic004G174200 Sobic002G411600--Sobic004G174200 Sobic002G411600--Sobic010G247800 Sobic001G534700 Sobic001G534700 Sobic002G411600--Sobic001G534700 Sobic003G101400 Sobic003G101400 Sobic002G411600--Sobic003G101400 Sobic001G540400--Sobic001G289600 Sobic003G408600 Sobic003G408600 Sobic001G540400--Sobic003G408600 Sobic007G062800 Sobic007G062800 Sobic001G540400--Sobic007G062800 Sobic005G008800 Sobic005G008800 Sobic001G540400--Sobic005G008800 Sobic001G540400--Sobic004G034900 Sobic005G112300 Sobic005G112300 Sobic001G540400--Sobic005G112300 Sobic001G540400--Sobic003G422500 Sobic002G397500 Sobic002G397500 Sobic001G540400--Sobic002G397500 Sobic010G112100 Sobic010G112100 Sobic001G540400--Sobic010G112100 Sobic004G034900--Sobic001G289600 Sobic004G034900--Sobic010G206900 Sobic010G010700 Sobic010G010700 Sobic004G034900--Sobic010G010700 Sobic004G034900--Sobic002G411600 Sobic004G034900--Sobic001G540400 Sobic004G034900--Sobic003G422500 Sobic004G276400 Sobic004G276400 Sobic004G034900--Sobic004G276400 Sobic004G034900--Sobic002G008900 Sobic004G034900--Sobic007G062800 Sobic001G289600--Sobic001G540400 Sobic001G289600--Sobic004G034900 Sobic001G289600--Sobic001G289800 Sobic001G289600--Sobic003G422500 Sobic001G289600--Sobic001G365900 Sobic001G289600--Sobic009G191000 Sobic001G289600--Sobic005G008800 Sobic007G105100 Sobic007G105100 Sobic001G289600--Sobic007G105100 Sobic001G289600--Sobic010G010700 Sobic009G053900--Sobic009G191000 Sobic003G118200 Sobic003G118200 Sobic009G053900--Sobic003G118200 Sobic009G053900--Sobic002G008900 Sobic009G053900--Sobic003G422500 Sobic009G053900--Sobic001G365900 Sobic009G053900--Sobic001G289600 Sobic009G053900--Sobic010G206900 Sobic007G075400 Sobic007G075400 Sobic009G053900--Sobic007G075400 Sobic009G053900--Sobic001G540400 Sobic002G008900--Sobic009G191000 Sobic002G008900--Sobic002G411600 Sobic002G008900--Sobic007G062800 Sobic002G008900--Sobic003G422500 Sobic005G001000 Sobic005G001000 Sobic002G008900--Sobic005G001000 Sobic002G008900--Sobic010G010700 Sobic002G008900--Sobic004G034900 Sobic002G008900--Sobic010G206900 Sobic002G008900--Sobic009G053900 Sobic001G365900--Sobic010G206900 Sobic001G365900--Sobic001G534700 Sobic001G365900--Sobic001G289600 Sobic008G130100 Sobic008G130100 Sobic001G365900--Sobic008G130100 Sobic001G365900--Sobic002G411600 Sobic001G365900--Sobic002G008900 Sobic001G365900--Sobic009G191000 Sobic001G365900--Sobic004G034900 Sobic001G365900--Sobic001G540400
Octagon: transcription factors


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