Gene annotation
Transcriptome id Sobic.001G390800.6,Sobic.001G390800.7,Sobic.001G390800.8,Sobic.001G390800.5
Synonym Sb01g037050, TGA2, AHBP-1B
Functional annotation transcription factor HBP-1b, putative, expressed
UniProt A0A1B6QNL1
Pfam PF00170 PF14144
Panther DB PTHR22952 PTHR22952:SF220
NCBI CDD -
KEGG Orthology K14431; transcription factor TGA
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity GO:0006351transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT3G12250 : TGACG motif-binding factor 6
RAP-DB (Rice) LOC_Os03g20310.4,LOC_Os03g20310.1 : transcription factor HBP-1b, putative, expressed
MaizeGDB (Corn) Zm00025a052520 , Zm00025a002218
Brachypodium KQK21935 , KQK21934 , KQK14553 , KQK14554
Barley HORVU4Hr1G052330.13 , HORVU4Hr1G052330.12 , HORVU4Hr1G052330.11 , HORVU4Hr1G052330.10 , HORVU4Hr1G052330.9 , HORVU4Hr1G052330.8 , HORVU4Hr1G052330.7 , HORVU4Hr1G052330.6 , HORVU4Hr1G052330.5 , HORVU4Hr1G052330.4 , HORVU4Hr1G052330.3 , HORVU4Hr1G052330.2 , HORVU4Hr1G052330.1
Wheat TraesCS4A02G126300 , TraesCS4A02G126300 , TraesCS4A02G126300 , TraesCS2D02G096800 , TraesCS2D02G096800 , TraesCS2D02G096800 , TraesCS2A02G097500 , TraesCS2A02G097500 , TraesCS2A02G097500 , TraesCS4D02G180200 , TraesCS4D02G180200 , TraesCS4D02G180200 , TraesCS4D02G180200 , TraesCS4B02G178600 , TraesCS2B02G113200 , TraesCS2B02G113200 , TraesCS2B02G113200
Populus PNT29595 , PNT29594 , PNT29596


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G268200 zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.001G121200 zinc finger, C3HC4 type domain containing protein, expressed -
3 Sobic.003G313500 MATH domain containing protein, expressed -
4 Sobic.010G205800 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
5 Sobic.001G085300 phytosulfokine receptor precursor, putative, expressed -
6 Sobic.010G147100 VHS and GAT domain containing protein, expressed -
7 Sobic.007G075400 expressed protein -
8 Sobic.010G139600 STE_PAK_Ste20_STLK.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
9 Sobic.001G050200 expressed protein -
10 Sobic.009G191000 MATH domain containing protein, expressed -
11 Sobic.001G079200 STE_MEKK_ste11_MAP3K.15 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
12 Sobic.003G422500 expressed protein -
13 Sobic.002G111000 peptidase, putative, expressed -
14 Sobic.004G113400 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant
15 Sobic.003G365300 sorting nexin 1, putative, expressed K17917: sorting nexin-1/2
16 Sobic.001G137100 homeodomain protein, putative, expressed -
17 Sobic.008G089100 armadillo/beta-catenin repeat family protein, putative, expressed -
18 Sobic.002G045600 transcriptional corepressor SEUSS, putative, expressed -
19 Sobic.009G027300 MYB family transcription factor, putative, expressed K04650: NCOR1, nuclear receptor co-repressor 1
20 Sobic.002G430000 expressed protein K08518: STXBP5, syntaxin-binding protein 5


Gene co-expression network
sample Sobic001G390800 Sobic001G390800 Sobic001G268200 Sobic001G268200 Sobic001G390800--Sobic001G268200 Sobic001G121200 Sobic001G121200 Sobic001G390800--Sobic001G121200 Sobic003G313500 Sobic003G313500 Sobic001G390800--Sobic003G313500 Sobic010G205800 Sobic010G205800 Sobic001G390800--Sobic010G205800 Sobic001G085300 Sobic001G085300 Sobic001G390800--Sobic001G085300 Sobic010G147100 Sobic010G147100 Sobic001G390800--Sobic010G147100 Sobic007G075400 Sobic007G075400 Sobic001G390800--Sobic007G075400 Sobic010G139600 Sobic010G139600 Sobic001G390800--Sobic010G139600 Sobic001G050200 Sobic001G050200 Sobic001G390800--Sobic001G050200 Sobic001G268200--Sobic001G390800 Sobic010G013200 Sobic010G013200 Sobic001G268200--Sobic010G013200 Sobic001G268200--Sobic010G147100 Sobic001G268200--Sobic003G313500 Sobic001G268200--Sobic001G121200 Sobic001G268200--Sobic010G139600 Sobic001G268200--Sobic001G085300 Sobic001G194200 Sobic001G194200 Sobic001G268200--Sobic001G194200 Sobic009G053900 Sobic009G053900 Sobic001G268200--Sobic009G053900 Sobic001G121200--Sobic001G390800 Sobic001G121200--Sobic010G205800 Sobic001G121200--Sobic001G268200 Sobic009G113000 Sobic009G113000 Sobic001G121200--Sobic009G113000 Sobic002G111000 Sobic002G111000 Sobic001G121200--Sobic002G111000 Sobic001G121200--Sobic010G147100 Sobic001G207000 Sobic001G207000 Sobic001G121200--Sobic001G207000 Sobic001G146800 Sobic001G146800 Sobic001G121200--Sobic001G146800 Sobic009G056200 Sobic009G056200 Sobic001G121200--Sobic009G056200 Sobic009G191000 Sobic009G191000 Sobic003G313500--Sobic009G191000 Sobic003G422500 Sobic003G422500 Sobic003G313500--Sobic003G422500 Sobic002G411600 Sobic002G411600 Sobic003G313500--Sobic002G411600 Sobic001G540400 Sobic001G540400 Sobic003G313500--Sobic001G540400 Sobic004G034900 Sobic004G034900 Sobic003G313500--Sobic004G034900 Sobic001G289600 Sobic001G289600 Sobic003G313500--Sobic001G289600 Sobic003G313500--Sobic009G053900 Sobic002G008900 Sobic002G008900 Sobic003G313500--Sobic002G008900 Sobic001G365900 Sobic001G365900 Sobic003G313500--Sobic001G365900 Sobic010G205800--Sobic001G121200 Sobic010G205800--Sobic001G390800 Sobic001G124200 Sobic001G124200 Sobic010G205800--Sobic001G124200 Sobic001G007000 Sobic001G007000 Sobic010G205800--Sobic001G007000 Sobic001G000200 Sobic001G000200 Sobic010G205800--Sobic001G000200 Sobic002G262900 Sobic002G262900 Sobic010G205800--Sobic002G262900 Sobic004G274200 Sobic004G274200 Sobic010G205800--Sobic004G274200 Sobic006G199200 Sobic006G199200 Sobic010G205800--Sobic006G199200 Sobic001G079200 Sobic001G079200 Sobic010G205800--Sobic001G079200 Sobic001G085300--Sobic001G390800 Sobic001G085300--Sobic003G313500 Sobic001G117200 Sobic001G117200 Sobic001G085300--Sobic001G117200 Sobic003G110000 Sobic003G110000 Sobic001G085300--Sobic003G110000 Sobic001G085300--Sobic003G422500 Sobic001G415300 Sobic001G415300 Sobic001G085300--Sobic001G415300 Sobic001G085300--Sobic010G139600 Sobic003G196300 Sobic003G196300 Sobic001G085300--Sobic003G196300 Sobic001G085300--Sobic001G268200 Sobic003G316500 Sobic003G316500 Sobic010G147100--Sobic003G316500 Sobic010G278200 Sobic010G278200 Sobic010G147100--Sobic010G278200 Sobic010G074300 Sobic010G074300 Sobic010G147100--Sobic010G074300 Sobic010G147100--Sobic003G313500 Sobic010G147100--Sobic001G390800 Sobic002G311100 Sobic002G311100 Sobic010G147100--Sobic002G311100 Sobic010G147100--Sobic009G053900 Sobic010G147100--Sobic001G268200 Sobic003G118200 Sobic003G118200 Sobic010G147100--Sobic003G118200 Sobic007G075400--Sobic010G139600 Sobic007G075400--Sobic009G053900 Sobic004G331100 Sobic004G331100 Sobic007G075400--Sobic004G331100 Sobic007G075400--Sobic002G008900 Sobic007G075400--Sobic009G191000 Sobic002G146300 Sobic002G146300 Sobic007G075400--Sobic002G146300 Sobic007G075400--Sobic003G422500 Sobic007G075400--Sobic003G313500 Sobic004G065000 Sobic004G065000 Sobic007G075400--Sobic004G065000 Sobic010G139600--Sobic007G075400 Sobic010G139600--Sobic002G146300 Sobic003G205200 Sobic003G205200 Sobic010G139600--Sobic003G205200 Sobic008G098900 Sobic008G098900 Sobic010G139600--Sobic008G098900 Sobic010G139600--Sobic003G313500 Sobic005G001000 Sobic005G001000 Sobic010G139600--Sobic005G001000 Sobic010G139600--Sobic001G194200 Sobic010G139600--Sobic003G422500 Sobic001G370900 Sobic001G370900 Sobic010G139600--Sobic001G370900 Sobic002G419800 Sobic002G419800 Sobic001G050200--Sobic002G419800 Sobic001G050200--Sobic003G422500 Sobic009G027300 Sobic009G027300 Sobic001G050200--Sobic009G027300 Sobic003G247300 Sobic003G247300 Sobic001G050200--Sobic003G247300 Sobic001G050200--Sobic009G191000 Sobic001G050200--Sobic007G075400 Sobic004G269200 Sobic004G269200 Sobic001G050200--Sobic004G269200 Sobic001G050200--Sobic004G331100 Sobic003G101400 Sobic003G101400 Sobic001G050200--Sobic003G101400
Octagon: transcription factors


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