Gene annotation
Transcriptome id Sobic.002G111000.1
Synonym Sb02g009490
Functional annotation peptidase, putative, expressed
UniProt A0A1B6QAJ1
Pfam PF01546
Panther DB PTHR12147 PTHR12147:SF22
NCBI CDD KOG2194; Aminopeptidases of the M20 family
KEGG Orthology -
Gene Ontology GO:0016787; hydrolase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT1G67420 : Zn-dependent exopeptidases superfamily protein
RAP-DB (Rice) LOC_Os07g19530.1 : peptidase, putative, expressed
MaizeGDB (Corn) Zm00025a045678
Brachypodium KQK20151 , KQK20152 , PNT76752 , PNT76751 , KQK20150 , KQK20148 , KQK20149
Barley HORVU2Hr1G051930.6 , HORVU2Hr1G051930.7 , HORVU2Hr1G051930.4 , HORVU2Hr1G051930.5 , HORVU2Hr1G051930.2 , HORVU2Hr1G051930.3 , HORVU2Hr1G051930.8 , HORVU2Hr1G051930.9 , HORVU2Hr1G051970.9 , HORVU2Hr1G051970.8 , HORVU2Hr1G051970.2 , HORVU2Hr1G051970.3 , HORVU2Hr1G051970.1 , HORVU2Hr1G051970.6 , HORVU2Hr1G051970.7 , HORVU2Hr1G051970.4 , HORVU2Hr1G051970.5 , HORVU2Hr1G051970.10 , HORVU2Hr1G051970.11 , HORVU2Hr1G051970.12 , HORVU2Hr1G051930.17 , HORVU2Hr1G051970.14 , HORVU2Hr1G051930.18 , HORVU2Hr1G051930.19 , HORVU2Hr1G051930.14 , HORVU2Hr1G051930.15 , HORVU2Hr1G051930.16 , HORVU2Hr1G051970.13 , HORVU2Hr1G051930.10 , HORVU2Hr1G051930.11 , HORVU2Hr1G051930.12 , HORVU2Hr1G051930.13
Wheat TraesCS2A02G237300 , TraesCS2A02G237300 , TraesCS2B02G261900 , TraesCS2D02G238800
Populus -


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cDNA sequences
Sobic.002G111000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G207400 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
2 Sobic.001G390800 transcription factor HBP-1b, putative, expressed K14431: transcription factor TGA
3 Sobic.001G016700 ion channel DMI1-like, chloroplast precursor, putative, expressed -
4 Sobic.001G121200 zinc finger, C3HC4 type domain containing protein, expressed -
5 Sobic.003G365300 sorting nexin 1, putative, expressed K17917: sorting nexin-1/2
6 Sobic.002G430000 expressed protein K08518: STXBP5, syntaxin-binding protein 5
7 Sobic.010G139600 STE_PAK_Ste20_STLK.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08835: OXSR1, serine/threonine-protein kinase OSR1/STK39
8 Sobic.010G147100 VHS and GAT domain containing protein, expressed -
9 Sobic.001G137100 homeodomain protein, putative, expressed -
10 Sobic.004G355000 SAC9, putative, expressed -
11 Sobic.007G075400 expressed protein -
12 Sobic.001G268200 zinc finger, C3HC4 type domain containing protein, expressed -
13 Sobic.004G347400 pumilio-family RNA binding protein, putative, expressed K17943: pumilio RNA-binding family
14 Sobic.001G146800 expressed protein -
15 Sobic.010G205800 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
16 Sobic.001G301700 MYB family transcription factor, putative, expressed K09522: DnaJ homolog subfamily C member 2
17 Sobic.005G001000 RNA recognition motif containing protein, putative, expressed K10643: CNOT4, NOT4, CCR4-NOT transcription complex subunit 4
18 Sobic.009G113000 chaperone protein dnaJ 49, putative, expressed K09518: DnaJ homolog subfamily B member 12
19 Sobic.003G139800 protein kinase, putative, expressed K13436: pto-interacting protein 1
20 Sobic.001G270400 OsPOP20 - Putative Prolyl Oligopeptidase homologue, expressed -


Gene co-expression network
sample Sobic002G111000 Sobic002G111000 Sobic001G207400 Sobic001G207400 Sobic002G111000--Sobic001G207400 Sobic001G390800 Sobic001G390800 Sobic002G111000--Sobic001G390800 Sobic001G016700 Sobic001G016700 Sobic002G111000--Sobic001G016700 Sobic001G121200 Sobic001G121200 Sobic002G111000--Sobic001G121200 Sobic003G365300 Sobic003G365300 Sobic002G111000--Sobic003G365300 Sobic002G430000 Sobic002G430000 Sobic002G111000--Sobic002G430000 Sobic010G139600 Sobic010G139600 Sobic002G111000--Sobic010G139600 Sobic010G147100 Sobic010G147100 Sobic002G111000--Sobic010G147100 Sobic001G137100 Sobic001G137100 Sobic002G111000--Sobic001G137100 Sobic004G355000 Sobic004G355000 Sobic001G207400--Sobic004G355000 Sobic001G207400--Sobic002G430000 Sobic002G270500 Sobic002G270500 Sobic001G207400--Sobic002G270500 Sobic006G204900 Sobic006G204900 Sobic001G207400--Sobic006G204900 Sobic005G157000 Sobic005G157000 Sobic001G207400--Sobic005G157000 Sobic001G207400--Sobic010G139600 Sobic001G207400--Sobic002G111000 Sobic003G322700 Sobic003G322700 Sobic001G207400--Sobic003G322700 Sobic001G050200 Sobic001G050200 Sobic001G207400--Sobic001G050200 Sobic001G268200 Sobic001G268200 Sobic001G390800--Sobic001G268200 Sobic001G390800--Sobic001G121200 Sobic003G313500 Sobic003G313500 Sobic001G390800--Sobic003G313500 Sobic010G205800 Sobic010G205800 Sobic001G390800--Sobic010G205800 Sobic001G085300 Sobic001G085300 Sobic001G390800--Sobic001G085300 Sobic001G390800--Sobic010G147100 Sobic007G075400 Sobic007G075400 Sobic001G390800--Sobic007G075400 Sobic001G390800--Sobic010G139600 Sobic001G390800--Sobic001G050200 Sobic001G016700--Sobic002G430000 Sobic001G016700--Sobic002G111000 Sobic001G016700--Sobic001G207400 Sobic001G016700--Sobic010G139600 Sobic003G110000 Sobic003G110000 Sobic001G016700--Sobic003G110000 Sobic001G016700--Sobic001G390800 Sobic001G016700--Sobic006G204900 Sobic001G016700--Sobic003G322700 Sobic003G086900 Sobic003G086900 Sobic001G016700--Sobic003G086900 Sobic001G121200--Sobic001G390800 Sobic001G121200--Sobic010G205800 Sobic001G121200--Sobic001G268200 Sobic009G113000 Sobic009G113000 Sobic001G121200--Sobic009G113000 Sobic001G121200--Sobic002G111000 Sobic001G121200--Sobic010G147100 Sobic001G207000 Sobic001G207000 Sobic001G121200--Sobic001G207000 Sobic001G146800 Sobic001G146800 Sobic001G121200--Sobic001G146800 Sobic009G056200 Sobic009G056200 Sobic001G121200--Sobic009G056200 Sobic003G365300--Sobic001G390800 Sobic006G002000 Sobic006G002000 Sobic003G365300--Sobic006G002000 Sobic006G082400 Sobic006G082400 Sobic003G365300--Sobic006G082400 Sobic004G275700 Sobic004G275700 Sobic003G365300--Sobic004G275700 Sobic003G365300--Sobic002G111000 Sobic001G203900 Sobic001G203900 Sobic003G365300--Sobic001G203900 Sobic009G068500 Sobic009G068500 Sobic003G365300--Sobic009G068500 Sobic003G006300 Sobic003G006300 Sobic003G365300--Sobic003G006300 Sobic001G107600 Sobic001G107600 Sobic003G365300--Sobic001G107600 Sobic002G430000--Sobic001G207400 Sobic001G117200 Sobic001G117200 Sobic002G430000--Sobic001G117200 Sobic002G430000--Sobic004G355000 Sobic008G098900 Sobic008G098900 Sobic002G430000--Sobic008G098900 Sobic002G430000--Sobic001G016700 Sobic004G113400 Sobic004G113400 Sobic002G430000--Sobic004G113400 Sobic002G430000--Sobic010G139600 Sobic008G092600 Sobic008G092600 Sobic002G430000--Sobic008G092600 Sobic002G430000--Sobic003G110000 Sobic010G139600--Sobic007G075400 Sobic002G146300 Sobic002G146300 Sobic010G139600--Sobic002G146300 Sobic003G205200 Sobic003G205200 Sobic010G139600--Sobic003G205200 Sobic010G139600--Sobic008G098900 Sobic010G139600--Sobic003G313500 Sobic005G001000 Sobic005G001000 Sobic010G139600--Sobic005G001000 Sobic001G194200 Sobic001G194200 Sobic010G139600--Sobic001G194200 Sobic003G422500 Sobic003G422500 Sobic010G139600--Sobic003G422500 Sobic001G370900 Sobic001G370900 Sobic010G139600--Sobic001G370900 Sobic003G316500 Sobic003G316500 Sobic010G147100--Sobic003G316500 Sobic010G278200 Sobic010G278200 Sobic010G147100--Sobic010G278200 Sobic010G074300 Sobic010G074300 Sobic010G147100--Sobic010G074300 Sobic010G147100--Sobic003G313500 Sobic010G147100--Sobic001G390800 Sobic002G311100 Sobic002G311100 Sobic010G147100--Sobic002G311100 Sobic009G053900 Sobic009G053900 Sobic010G147100--Sobic009G053900 Sobic010G147100--Sobic001G268200 Sobic003G118200 Sobic003G118200 Sobic010G147100--Sobic003G118200 Sobic001G137100--Sobic001G390800 Sobic007G024700 Sobic007G024700 Sobic001G137100--Sobic007G024700 Sobic010G228400 Sobic010G228400 Sobic001G137100--Sobic010G228400 Sobic002G132000 Sobic002G132000 Sobic001G137100--Sobic002G132000 Sobic001G270400 Sobic001G270400 Sobic001G137100--Sobic001G270400 Sobic002G130800 Sobic002G130800 Sobic001G137100--Sobic002G130800 Sobic009G094300 Sobic009G094300 Sobic001G137100--Sobic009G094300 Sobic001G137100--Sobic002G111000 Sobic002G427050 Sobic002G427050 Sobic001G137100--Sobic002G427050
Octagon: transcription factors


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