Gene annotation
Transcriptome id Sobic.001G301700.2,Sobic.001G301700.1
Synonym
Functional annotation MYB family transcription factor, putative, expressed
UniProt C5WSF7
Pfam PF00249 PF00226
Panther DB PTHR24078 PTHR24078:SF310
NCBI CDD KOG0724; Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains
KEGG Orthology K09522; DnaJ homolog subfamily C member 2
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G11450 : DnaJ domain ;Myb-like DNA-binding domain
RAP-DB (Rice) LOC_Os04g30890.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a011839 , Zm00025a011835
Brachypodium KQJ82202
Barley HORVU1Hr1G091820.2 , HORVU1Hr1G091820.1
Wheat TraesCS1D02G428400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G438600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dihydrodipicolinate reductase, putative, expressed K00215: 4-hydroxy-tetrahydrodipicolinate reductase
2 Sobic.001G207400 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
3 Sobic.001G015500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
4 Sobic.002G266000 ankyrin repeat-containing protein, putative, expressed -
5 Sobic.008G093000 ABC transporter, ATP-binding protein, putative, expressed K06185: ATP-binding cassette, subfamily F, member 2
6 Sobic.002G270500 UBX domain-containing protein, putative, expressed -
7 Sobic.002G430000 expressed protein K08518: STXBP5, syntaxin-binding protein 5
8 Sobic.002G111000 peptidase, putative, expressed -
9 Sobic.010G205200 Ser/Thr protein phosphatase family protein, putative, expressed -
10 Sobic.004G355000 SAC9, putative, expressed -
11 Sobic.006G199000 pathogenesis-related Bet v I family protein, putative, expressed -
12 Sobic.004G261900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@diacylglycerol O-acyltransferase, putative, expressed K14457: MOGAT2, 2-acylglycerol O-acyltransferase 2
13 Sobic.001G224600 peroxisome assembly protein 12, putative, expressed K13345: PEX12, peroxin-12
14 Sobic.001G322700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@5-oxoprolinase, putative, expressed K01469: OPLAH, OXP1, 5-oxoprolinase (ATP-hydrolysing)
15 Sobic.010G232600 solute carrier family 35 member F5, putative, expressed K15289: solute carrier family 35, member F5
16 Sobic.001G325200 Expressed in drought and oxidative stress(PubMedID : 29862293)@aldehyde oxidase, putative, expressed K00106: xanthine dehydrogenase/oxidase
17 Sobic.004G124200 3-hydroxyacyl-CoA dehydrogenase, putative, expressed K10527: enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
18 Sobic.009G126900 mitochondrial carrier protein, putative, expressed -
19 Sobic.006G082400 expressed protein -
20 Sobic.009G057300 acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase


Gene co-expression network
sample Sobic001G301700 Sobic001G301700 Sobic001G438600 Sobic001G438600 Sobic001G301700--Sobic001G438600 Sobic001G207400 Sobic001G207400 Sobic001G301700--Sobic001G207400 Sobic001G015500 Sobic001G015500 Sobic001G301700--Sobic001G015500 Sobic002G266000 Sobic002G266000 Sobic001G301700--Sobic002G266000 Sobic008G093000 Sobic008G093000 Sobic001G301700--Sobic008G093000 Sobic002G270500 Sobic002G270500 Sobic001G301700--Sobic002G270500 Sobic002G430000 Sobic002G430000 Sobic001G301700--Sobic002G430000 Sobic002G111000 Sobic002G111000 Sobic001G301700--Sobic002G111000 Sobic010G205200 Sobic010G205200 Sobic001G301700--Sobic010G205200 Sobic001G438600--Sobic001G301700 Sobic004G355000 Sobic004G355000 Sobic001G438600--Sobic004G355000 Sobic001G325200 Sobic001G325200 Sobic001G438600--Sobic001G325200 Sobic001G438600--Sobic001G207400 Sobic003G428400 Sobic003G428400 Sobic001G438600--Sobic003G428400 Sobic007G068100 Sobic007G068100 Sobic001G438600--Sobic007G068100 Sobic001G438600--Sobic001G015500 Sobic001G474500 Sobic001G474500 Sobic001G438600--Sobic001G474500 Sobic007G186200 Sobic007G186200 Sobic001G438600--Sobic007G186200 Sobic001G207400--Sobic004G355000 Sobic001G207400--Sobic002G430000 Sobic001G207400--Sobic002G270500 Sobic006G204900 Sobic006G204900 Sobic001G207400--Sobic006G204900 Sobic005G157000 Sobic005G157000 Sobic001G207400--Sobic005G157000 Sobic010G139600 Sobic010G139600 Sobic001G207400--Sobic010G139600 Sobic001G207400--Sobic002G111000 Sobic003G322700 Sobic003G322700 Sobic001G207400--Sobic003G322700 Sobic001G050200 Sobic001G050200 Sobic001G207400--Sobic001G050200 Sobic001G069900 Sobic001G069900 Sobic001G015500--Sobic001G069900 Sobic001G015500--Sobic001G325200 Sobic006G091700 Sobic006G091700 Sobic001G015500--Sobic006G091700 Sobic003G087200 Sobic003G087200 Sobic001G015500--Sobic003G087200 Sobic004G101900 Sobic004G101900 Sobic001G015500--Sobic004G101900 Sobic005G178100 Sobic005G178100 Sobic001G015500--Sobic005G178100 Sobic004G124200 Sobic004G124200 Sobic001G015500--Sobic004G124200 Sobic001G150600 Sobic001G150600 Sobic001G015500--Sobic001G150600 Sobic001G015500--Sobic007G186200 Sobic002G266000--Sobic003G322700 Sobic001G282600 Sobic001G282600 Sobic002G266000--Sobic001G282600 Sobic006G104600 Sobic006G104600 Sobic002G266000--Sobic006G104600 Sobic002G249200 Sobic002G249200 Sobic002G266000--Sobic002G249200 Sobic004G261900 Sobic004G261900 Sobic002G266000--Sobic004G261900 Sobic007G004500 Sobic007G004500 Sobic002G266000--Sobic007G004500 Sobic004G034600 Sobic004G034600 Sobic002G266000--Sobic004G034600 Sobic005G149700 Sobic005G149700 Sobic002G266000--Sobic005G149700 Sobic004G225200 Sobic004G225200 Sobic002G266000--Sobic004G225200 Sobic001G199100 Sobic001G199100 Sobic008G093000--Sobic001G199100 Sobic010G064600 Sobic010G064600 Sobic008G093000--Sobic010G064600 Sobic008G093000--Sobic001G301700 Sobic003G312200 Sobic003G312200 Sobic008G093000--Sobic003G312200 Sobic004G275700 Sobic004G275700 Sobic008G093000--Sobic004G275700 Sobic010G229400 Sobic010G229400 Sobic008G093000--Sobic010G229400 Sobic009G207000 Sobic009G207000 Sobic008G093000--Sobic009G207000 Sobic003G087000 Sobic003G087000 Sobic008G093000--Sobic003G087000 Sobic002G244100 Sobic002G244100 Sobic008G093000--Sobic002G244100 Sobic007G024700 Sobic007G024700 Sobic002G270500--Sobic007G024700 Sobic002G270500--Sobic001G207400 Sobic002G270500--Sobic004G355000 Sobic002G270500--Sobic005G157000 Sobic002G270500--Sobic002G430000 Sobic009G126900 Sobic009G126900 Sobic002G270500--Sobic009G126900 Sobic009G094300 Sobic009G094300 Sobic002G270500--Sobic009G094300 Sobic004G113400 Sobic004G113400 Sobic002G270500--Sobic004G113400 Sobic004G269200 Sobic004G269200 Sobic002G270500--Sobic004G269200 Sobic002G430000--Sobic001G207400 Sobic001G117200 Sobic001G117200 Sobic002G430000--Sobic001G117200 Sobic002G430000--Sobic004G355000 Sobic008G098900 Sobic008G098900 Sobic002G430000--Sobic008G098900 Sobic001G016700 Sobic001G016700 Sobic002G430000--Sobic001G016700 Sobic002G430000--Sobic004G113400 Sobic002G430000--Sobic010G139600 Sobic008G092600 Sobic008G092600 Sobic002G430000--Sobic008G092600 Sobic003G110000 Sobic003G110000 Sobic002G430000--Sobic003G110000 Sobic002G111000--Sobic001G207400 Sobic001G390800 Sobic001G390800 Sobic002G111000--Sobic001G390800 Sobic002G111000--Sobic001G016700 Sobic001G121200 Sobic001G121200 Sobic002G111000--Sobic001G121200 Sobic003G365300 Sobic003G365300 Sobic002G111000--Sobic003G365300 Sobic002G111000--Sobic002G430000 Sobic002G111000--Sobic010G139600 Sobic010G147100 Sobic010G147100 Sobic002G111000--Sobic010G147100 Sobic001G137100 Sobic001G137100 Sobic002G111000--Sobic001G137100 Sobic010G205200--Sobic003G428400 Sobic010G205200--Sobic001G069900 Sobic006G028900 Sobic006G028900 Sobic010G205200--Sobic006G028900 Sobic010G112300 Sobic010G112300 Sobic010G205200--Sobic010G112300 Sobic010G205200--Sobic001G015500 Sobic010G205200--Sobic001G301700 Sobic010G205200--Sobic001G474500 Sobic010G205200--Sobic001G325200 Sobic010G205200--Sobic007G186200
Octagon: transcription factors


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