Gene annotation
Transcriptome id Sobic.010G232600.1
Synonym Sb10g027500
Functional annotation solute carrier family 35 member F5, putative, expressed
UniProt A0A194YKZ8
Pfam PF06027
Panther DB PTHR23051 PTHR23051:SF1
NCBI CDD KOG2765; Predicted membrane protein
KEGG Orthology K15289; solute carrier family 35, member F5
Gene Ontology GO:0016021; integral component of membrane GO:0006810transport


Orthologs (automatic annotation)
TAIR AT3G07080 : EamA-like transporter family
RAP-DB (Rice) LOC_Os06g46820.1 : solute carrier family 35 member F5, putative, expressed
MaizeGDB (Corn) Zm00025a041872 , Zm00025a018144
Brachypodium KQK17180
Barley HORVU7Hr1G102150.2 , HORVU7Hr1G102150.3 , HORVU7Hr1G102150.1
Wheat TraesCS7D02G441800 , TraesCS7D02G441800 , TraesCS7A02G452600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G126100 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
2 Sobic.004G004300 expressed protein -
3 Sobic.001G281100 START domain containing protein, expressed -
4 Sobic.004G135400 expressed protein -
5 Sobic.001G415300 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
6 Sobic.001G050200 expressed protein -
7 Sobic.004G261600 expressed protein -
8 Sobic.004G351100 signal peptide peptidase-like 2B, putative, expressed K09597: signal peptide peptidase-like 2B
9 Sobic.004G178200 ligatin, putative, expressed K15027: translation initiation factor 2D
10 Sobic.002G270500 UBX domain-containing protein, putative, expressed -
11 Sobic.001G534800 Putative ortholog gene associated with awn presence/absence in wheat(PubMedID : 25237112)@adapitin protein, putative, expressed K11824: AP-2 complex subunit alpha
12 Sobic.005G003300 clathrin heavy chain, putative, expressed K04646: clathrin heavy chain
13 Sobic.004G277200 GPI transamidase subunit PIG-U domain containing protein, expressed K05293: GPI-anchor transamidase subunit U
14 Sobic.007G056600 expressed protein -
15 Sobic.006G208500 proteasome/cyclosome repeat containing protein, expressed K03032: PSMD1, 26S proteasome regulatory subunit N2
16 Sobic.001G107600 - K18328: lariat debranching enzyme
17 Sobic.004G004200 expressed protein -
18 Sobic.001G101100 mitochondrial carrier protein, putative, expressed K15115: SLC25A32, solute carrier family 25 (mitochondrial folate transporter), member 32
19 Sobic.001G347500 expressed protein -
20 Sobic.004G269200 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1


Gene co-expression network
sample Sobic010G232600 Sobic010G232600 Sobic006G126100 Sobic006G126100 Sobic010G232600--Sobic006G126100 Sobic004G004300 Sobic004G004300 Sobic010G232600--Sobic004G004300 Sobic001G281100 Sobic001G281100 Sobic010G232600--Sobic001G281100 Sobic004G135400 Sobic004G135400 Sobic010G232600--Sobic004G135400 Sobic001G415300 Sobic001G415300 Sobic010G232600--Sobic001G415300 Sobic001G050200 Sobic001G050200 Sobic010G232600--Sobic001G050200 Sobic004G261600 Sobic004G261600 Sobic010G232600--Sobic004G261600 Sobic004G351100 Sobic004G351100 Sobic010G232600--Sobic004G351100 Sobic004G178200 Sobic004G178200 Sobic010G232600--Sobic004G178200 Sobic006G126100--Sobic004G004300 Sobic008G004600 Sobic008G004600 Sobic006G126100--Sobic008G004600 Sobic004G039600 Sobic004G039600 Sobic006G126100--Sobic004G039600 Sobic001G534800 Sobic001G534800 Sobic006G126100--Sobic001G534800 Sobic003G104000 Sobic003G104000 Sobic006G126100--Sobic003G104000 Sobic006G012500 Sobic006G012500 Sobic006G126100--Sobic006G012500 Sobic006G126100--Sobic004G135400 Sobic007G132100 Sobic007G132100 Sobic006G126100--Sobic007G132100 Sobic006G208500 Sobic006G208500 Sobic006G126100--Sobic006G208500 Sobic004G004300--Sobic001G281100 Sobic005G026200 Sobic005G026200 Sobic004G004300--Sobic005G026200 Sobic004G004300--Sobic001G534800 Sobic004G004300--Sobic006G126100 Sobic001G117200 Sobic001G117200 Sobic004G004300--Sobic001G117200 Sobic004G004200 Sobic004G004200 Sobic004G004300--Sobic004G004200 Sobic004G004300--Sobic001G415300 Sobic010G275500 Sobic010G275500 Sobic004G004300--Sobic010G275500 Sobic005G003300 Sobic005G003300 Sobic004G004300--Sobic005G003300 Sobic001G281100--Sobic001G534800 Sobic001G281100--Sobic004G004300 Sobic001G065000 Sobic001G065000 Sobic001G281100--Sobic001G065000 Sobic001G281100--Sobic005G026200 Sobic008G099800 Sobic008G099800 Sobic001G281100--Sobic008G099800 Sobic003G229500 Sobic003G229500 Sobic001G281100--Sobic003G229500 Sobic001G281100--Sobic006G012500 Sobic004G072100 Sobic004G072100 Sobic001G281100--Sobic004G072100 Sobic001G281100--Sobic010G275500 Sobic004G135400--Sobic001G534800 Sobic004G135400--Sobic006G208500 Sobic004G135400--Sobic008G099800 Sobic004G277200 Sobic004G277200 Sobic004G135400--Sobic004G277200 Sobic004G135400--Sobic005G003300 Sobic004G135400--Sobic008G004600 Sobic004G135400--Sobic006G126100 Sobic002G042600 Sobic002G042600 Sobic004G135400--Sobic002G042600 Sobic009G245800 Sobic009G245800 Sobic004G135400--Sobic009G245800 Sobic002G137400 Sobic002G137400 Sobic001G415300--Sobic002G137400 Sobic001G415300--Sobic004G004300 Sobic001G415300--Sobic001G281100 Sobic001G085300 Sobic001G085300 Sobic001G415300--Sobic001G085300 Sobic003G337300 Sobic003G337300 Sobic001G415300--Sobic003G337300 Sobic001G415300--Sobic006G126100 Sobic001G415300--Sobic001G534800 Sobic004G002100 Sobic004G002100 Sobic001G415300--Sobic004G002100 Sobic001G457900 Sobic001G457900 Sobic001G415300--Sobic001G457900 Sobic002G419800 Sobic002G419800 Sobic001G050200--Sobic002G419800 Sobic003G422500 Sobic003G422500 Sobic001G050200--Sobic003G422500 Sobic009G027300 Sobic009G027300 Sobic001G050200--Sobic009G027300 Sobic003G247300 Sobic003G247300 Sobic001G050200--Sobic003G247300 Sobic009G191000 Sobic009G191000 Sobic001G050200--Sobic009G191000 Sobic007G075400 Sobic007G075400 Sobic001G050200--Sobic007G075400 Sobic004G269200 Sobic004G269200 Sobic001G050200--Sobic004G269200 Sobic004G331100 Sobic004G331100 Sobic001G050200--Sobic004G331100 Sobic003G101400 Sobic003G101400 Sobic001G050200--Sobic003G101400 Sobic004G228800 Sobic004G228800 Sobic004G261600--Sobic004G228800 Sobic004G261600--Sobic006G126100 Sobic003G209200 Sobic003G209200 Sobic004G261600--Sobic003G209200 Sobic004G261600--Sobic003G104000 Sobic007G005500 Sobic007G005500 Sobic004G261600--Sobic007G005500 Sobic001G251200 Sobic001G251200 Sobic004G261600--Sobic001G251200 Sobic004G261600--Sobic001G415300 Sobic004G261600--Sobic004G004300 Sobic004G261600--Sobic008G099800 Sobic010G118950 Sobic010G118950 Sobic004G351100--Sobic010G118950 Sobic010G276900 Sobic010G276900 Sobic004G351100--Sobic010G276900 Sobic004G351100--Sobic001G281100 Sobic001G441400 Sobic001G441400 Sobic004G351100--Sobic001G441400 Sobic007G207000 Sobic007G207000 Sobic004G351100--Sobic007G207000 Sobic004G091100 Sobic004G091100 Sobic004G351100--Sobic004G091100 Sobic010G116600 Sobic010G116600 Sobic004G351100--Sobic010G116600 Sobic004G351100--Sobic004G004300 Sobic004G351100--Sobic001G050200 Sobic004G178200--Sobic007G132100 Sobic007G218000 Sobic007G218000 Sobic004G178200--Sobic007G218000 Sobic006G136400 Sobic006G136400 Sobic004G178200--Sobic006G136400 Sobic006G131000 Sobic006G131000 Sobic004G178200--Sobic006G131000 Sobic004G178200--Sobic006G126100 Sobic004G178200--Sobic006G012500 Sobic004G178200--Sobic010G116600 Sobic002G303600 Sobic002G303600 Sobic004G178200--Sobic002G303600 Sobic004G178200--Sobic004G039600
Octagon: transcription factors


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