Gene annotation
Transcriptome id Sobic.004G351100.1
Synonym Sb04g037790, SPPL2, ATSPPL2
Functional annotation signal peptide peptidase-like 2B, putative, expressed
UniProt C5XW22
Pfam PF02225 PF04258
Panther DB PTHR12174 PTHR12174:SF45
NCBI CDD -
KEGG Orthology K09597; signal peptide peptidase-like 2B
Gene Ontology GO:0016021; integral component of membrane GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT1G63690 : SIGNAL PEPTIDE PEPTIDASE-LIKE 2
RAP-DB (Rice) LOC_Os02g57710.1 : signal peptide peptidase-like 2B, putative, expressed
MaizeGDB (Corn) Zm00025a032751 , Zm00025a018602
Brachypodium PNT75253 , KQK01463 , KQK16532
Barley HORVU7Hr1G122650.6 , HORVU7Hr1G122650.5 , HORVU7Hr1G122650.4 , HORVU7Hr1G122650.3 , HORVU7Hr1G122650.2 , HORVU7Hr1G122650.1
Wheat TraesCS6A02G406000 , TraesCS4D02G010500 , TraesCS6B02G451100 , TraesCS6D02G389600
Populus -


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cDNA sequences
Sobic.004G351100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G118950 - -
2 Sobic.010G276900 - -
3 Sobic.001G281100 START domain containing protein, expressed -
4 Sobic.001G441400 transcription factor, putative, expressed K09060: plant G-box-binding factor
5 Sobic.007G207000 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL15 - SBP-box gene family member, expressed -
6 Sobic.004G091100 nuclear protein ZAP-related, putative, expressed K17602: YLP motif-containing protein 1
7 Sobic.010G116600 FHA domain containing protein, putative, expressed -
8 Sobic.004G004300 expressed protein -
9 Sobic.001G050200 expressed protein -
10 Sobic.006G126100 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
11 Sobic.002G299700 ATGRIP/GRIP, putative, expressed -
12 Sobic.001G014100 expressed protein -
13 Sobic.003G093800 - K03254: translation initiation factor 3 subunit A
14 Sobic.004G072100 centromere/kinetochore protein zw10, putative, expressed K11578: ZW10, protein transport protein DSL1/ZW10
15 Sobic.001G534800 Putative ortholog gene associated with awn presence/absence in wheat(PubMedID : 25237112)@adapitin protein, putative, expressed K11824: AP-2 complex subunit alpha
16 Sobic.010G053800 AP-1 complex subunit gamma-1, putative, expressed K12391: AP-1 complex subunit gamma-1
17 Sobic.010G232600 solute carrier family 35 member F5, putative, expressed K15289: solute carrier family 35, member F5
18 Sobic.001G196500 plus-3 domain containing protein, putative, expressed -
19 Sobic.010G275500 EF hand family protein, putative, expressed -
20 Sobic.001G251200 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase


Gene co-expression network
sample Sobic004G351100 Sobic004G351100 Sobic010G118950 Sobic010G118950 Sobic004G351100--Sobic010G118950 Sobic010G276900 Sobic010G276900 Sobic004G351100--Sobic010G276900 Sobic001G281100 Sobic001G281100 Sobic004G351100--Sobic001G281100 Sobic001G441400 Sobic001G441400 Sobic004G351100--Sobic001G441400 Sobic007G207000 Sobic007G207000 Sobic004G351100--Sobic007G207000 Sobic004G091100 Sobic004G091100 Sobic004G351100--Sobic004G091100 Sobic010G116600 Sobic010G116600 Sobic004G351100--Sobic010G116600 Sobic004G004300 Sobic004G004300 Sobic004G351100--Sobic004G004300 Sobic001G050200 Sobic001G050200 Sobic004G351100--Sobic001G050200 Sobic010G118950--Sobic004G351100 Sobic004G277200 Sobic004G277200 Sobic010G118950--Sobic004G277200 Sobic010G118950--Sobic010G116600 Sobic010G053800 Sobic010G053800 Sobic010G118950--Sobic010G053800 Sobic002G299700 Sobic002G299700 Sobic010G118950--Sobic002G299700 Sobic010G118950--Sobic001G441400 Sobic010G118950--Sobic004G091100 Sobic010G275500 Sobic010G275500 Sobic010G118950--Sobic010G275500 Sobic001G196500 Sobic001G196500 Sobic010G118950--Sobic001G196500 Sobic010G276900--Sobic004G351100 Sobic001G291000 Sobic001G291000 Sobic010G276900--Sobic001G291000 Sobic001G091400 Sobic001G091400 Sobic010G276900--Sobic001G091400 Sobic010G276900--Sobic007G207000 Sobic010G276900--Sobic010G118950 Sobic010G276900--Sobic002G299700 Sobic002G275600 Sobic002G275600 Sobic010G276900--Sobic002G275600 Sobic009G010600 Sobic009G010600 Sobic010G276900--Sobic009G010600 Sobic001G474600 Sobic001G474600 Sobic010G276900--Sobic001G474600 Sobic001G534800 Sobic001G534800 Sobic001G281100--Sobic001G534800 Sobic001G281100--Sobic004G004300 Sobic001G065000 Sobic001G065000 Sobic001G281100--Sobic001G065000 Sobic005G026200 Sobic005G026200 Sobic001G281100--Sobic005G026200 Sobic008G099800 Sobic008G099800 Sobic001G281100--Sobic008G099800 Sobic003G229500 Sobic003G229500 Sobic001G281100--Sobic003G229500 Sobic006G012500 Sobic006G012500 Sobic001G281100--Sobic006G012500 Sobic004G072100 Sobic004G072100 Sobic001G281100--Sobic004G072100 Sobic001G281100--Sobic010G275500 Sobic001G451400 Sobic001G451400 Sobic001G441400--Sobic001G451400 Sobic003G404500 Sobic003G404500 Sobic001G441400--Sobic003G404500 Sobic006G252900 Sobic006G252900 Sobic001G441400--Sobic006G252900 Sobic005G027400 Sobic005G027400 Sobic001G441400--Sobic005G027400 Sobic009G165700 Sobic009G165700 Sobic001G441400--Sobic009G165700 Sobic001G363500 Sobic001G363500 Sobic001G441400--Sobic001G363500 Sobic003G102400 Sobic003G102400 Sobic001G441400--Sobic003G102400 Sobic001G441400--Sobic002G299700 Sobic001G441400--Sobic004G351100 Sobic001G125200 Sobic001G125200 Sobic007G207000--Sobic001G125200 Sobic007G207000--Sobic001G474600 Sobic003G101400 Sobic003G101400 Sobic007G207000--Sobic003G101400 Sobic009G191000 Sobic009G191000 Sobic007G207000--Sobic009G191000 Sobic007G207000--Sobic001G196500 Sobic001G540400 Sobic001G540400 Sobic007G207000--Sobic001G540400 Sobic007G207000--Sobic004G351100 Sobic002G309600 Sobic002G309600 Sobic007G207000--Sobic002G309600 Sobic007G207000--Sobic001G050200 Sobic004G091100--Sobic009G165700 Sobic004G091100--Sobic001G451400 Sobic004G091100--Sobic010G118950 Sobic004G091100--Sobic009G191000 Sobic008G087866 Sobic008G087866 Sobic004G091100--Sobic008G087866 Sobic001G128300 Sobic001G128300 Sobic004G091100--Sobic001G128300 Sobic001G534700 Sobic001G534700 Sobic004G091100--Sobic001G534700 Sobic003G422500 Sobic003G422500 Sobic004G091100--Sobic003G422500 Sobic004G091100--Sobic001G050200 Sobic002G071500 Sobic002G071500 Sobic010G116600--Sobic002G071500 Sobic010G116600--Sobic002G299700 Sobic003G093800 Sobic003G093800 Sobic010G116600--Sobic003G093800 Sobic009G044800 Sobic009G044800 Sobic010G116600--Sobic009G044800 Sobic010G116600--Sobic004G072100 Sobic010G236400 Sobic010G236400 Sobic010G116600--Sobic010G236400 Sobic010G116600--Sobic010G275500 Sobic003G408600 Sobic003G408600 Sobic010G116600--Sobic003G408600 Sobic010G116600--Sobic010G053800 Sobic004G004300--Sobic001G281100 Sobic004G004300--Sobic005G026200 Sobic004G004300--Sobic001G534800 Sobic006G126100 Sobic006G126100 Sobic004G004300--Sobic006G126100 Sobic001G117200 Sobic001G117200 Sobic004G004300--Sobic001G117200 Sobic004G004200 Sobic004G004200 Sobic004G004300--Sobic004G004200 Sobic001G415300 Sobic001G415300 Sobic004G004300--Sobic001G415300 Sobic004G004300--Sobic010G275500 Sobic005G003300 Sobic005G003300 Sobic004G004300--Sobic005G003300 Sobic002G419800 Sobic002G419800 Sobic001G050200--Sobic002G419800 Sobic001G050200--Sobic003G422500 Sobic009G027300 Sobic009G027300 Sobic001G050200--Sobic009G027300 Sobic003G247300 Sobic003G247300 Sobic001G050200--Sobic003G247300 Sobic001G050200--Sobic009G191000 Sobic007G075400 Sobic007G075400 Sobic001G050200--Sobic007G075400 Sobic004G269200 Sobic004G269200 Sobic001G050200--Sobic004G269200 Sobic004G331100 Sobic004G331100 Sobic001G050200--Sobic004G331100 Sobic001G050200--Sobic003G101400
Octagon: transcription factors


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